NO21G01770, NO21G01770 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01770 vs. NCBI_GenBank
Match: EWM22681.1 (binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 203.0 bits (515), Expect = 6.100e-49 Identity = 99/138 (71.74%), Postives = 113/138 (81.88%), Query Frame = 0
Query: 1 MSAGKFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGFEGRDH 139
MSA K FLSA++FAVVGAST REKFGNKVLRCY+Q GK PINP+E+ IEG+ LANLS L P+ TAVSV+TPP VTV +LE+AA+LGIKH+WLQPGCESPE +A A R GLLPTLI GGPCVLVELGF+ DH
Sbjct: 1 MSAAKIPAFLSASSFAVVGASTNREKFGNKVLRCYIQHGKSITPINPKERMIEGIAALANLSSLPNPTNTAVSVVTPPIVTVDILEEAARLGIKHIWLQPGCESPEVMAAAARFGLLPTLISGGPCVLVELGFD--DH 136
BLAST of NO21G01770 vs. NCBI_GenBank
Match: CBJ30528.1 (CoA-binding domain protein [Ectocarpus siliculosus]) HSP 1 Score: 153.3 bits (386), Expect = 5.500e-34 Identity = 74/125 (59.20%), Postives = 95/125 (76.00%), Query Frame = 0
Query: 9 FLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGF 134
FL+A FAVVGAST R KFGNKVLRCYL K +P+NPRE+EIEG C+ +LS L P + +VSV+TPPAVT++V+E+A +LG+K +WLQPG E E ++ AE +GL +I G PCVLVELG+
Sbjct: 8 FLAADRFAVVGASTNRSKFGNKVLRCYLWREKTVVPVNPREEEIEGKKCVKSLSDLPDPQDVSVSVVTPPAVTLAVVEEAGRLGVKRLWLQPGSEDDEVLSKAEELGL--QIIHGEPCVLVELGY 130
BLAST of NO21G01770 vs. NCBI_GenBank
Match: WP_040098147.1 (CoA-binding protein [Geoalkalibacter ferrihydriticus] >KIH76974.1 CoA-binding protein [Geoalkalibacter ferrihydriticus DSM 17813] >SDL41513.1 Predicted CoA-binding protein [Geoalkalibacter ferrihydriticus]) HSP 1 Score: 142.9 bits (359), Expect = 7.500e-31 Identity = 71/132 (53.79%), Postives = 95/132 (71.97%), Query Frame = 0
Query: 5 KFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSET-AVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGFEG 136
K FL+A F VVGAS++ K+GNKVLRCYLQ+G+ IP+NP EK+IEG+ C+AN+S L P E ++SVITPP VT V++ A G++++W+QPG ESP A+A AE+ GL +I G C+LV LGF G
Sbjct: 7 KIDQFLAADVFGVVGASSKTYKYGNKVLRCYLQNGRNVIPVNPVEKQIEGIDCVANVSEL--PDEVKSISVITPPQVTDKVVDAAIARGVENIWMQPGAESPPAVAKAEKAGL--NVIADGSCILVVLGFSG 134
BLAST of NO21G01770 vs. NCBI_GenBank
Match: WP_027715288.1 (CoA-binding protein [Desulfuromonas sp. TF]) HSP 1 Score: 139.0 bits (349), Expect = 1.100e-29 Identity = 68/134 (50.75%), Postives = 95/134 (70.90%), Query Frame = 0
Query: 5 KFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGFEGRDH 139
+ FLS+ F V GAST REK+GNKVLRCYL +GKKAIPINPR +IEG+PC+A ++ L P ++SVITPP +T +V+++A G+++VW+QPG ESP A+ + G+ +I G C+LV LG+ R+H
Sbjct: 4 RIEKFLSSQAFGVAGASTNREKYGNKVLRCYLANGKKAIPINPRADKIEGVPCVAGVADLP-PDVKSLSVITPPKITETVVDEAIGKGVENVWMQPGAESPAAVEKCRKAGI--NVIADGSCLLVVLGY--REH 132
BLAST of NO21G01770 vs. NCBI_GenBank
Match: PIE24721.1 (CoA-binding protein [Planctomycetes bacterium]) HSP 1 Score: 138.3 bits (347), Expect = 1.800e-29 Identity = 74/125 (59.20%), Postives = 87/125 (69.60%), Query Frame = 0
Query: 9 FLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGF 134
F FAVVGAST+REK+GNKVLRCYLQ +A PINP E+EGLP +L+ T A+SVITPP +T +LEQA + GI VWLQPG ESP+AIA AE G+ LI GGPC+LV LGF
Sbjct: 8 FFEHGPFAVVGASTKREKYGNKVLRCYLQHDLQAYPINPHADEVEGLPAYPDLN-STPQKPGAISVITPPEITEKLLEQAHEFGIDWVWLQPGAESPKAIAKAEGYGM--KLIAGGPCLLVALGF 129
BLAST of NO21G01770 vs. NCBI_GenBank
Match: WP_026852644.1 (CoA-binding protein [Geothrix fermentans]) HSP 1 Score: 137.5 bits (345), Expect = 3.100e-29 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 0
Query: 5 KFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGF 134
+ FL++ FAVVGAST R+K+GNKVLRCY Q G + PINP+ E+EGL +L+ L A+SVITPPA T V+ +AA G+KHVW+QPG ES EAI TAE +G+ +I GGPC+LV +G+
Sbjct: 6 RIQSFLASGPFAVVGASTDRDKYGNKVLRCYQQHGHEVYPINPKAPEVEGLKAYPSLAALPV-KVPAISVITPPAATEQVVREAAAAGVKHVWMQPGAESDEAIRTAESLGM--NVIAGGPCLLVVMGY 131
BLAST of NO21G01770 vs. NCBI_GenBank
Match: OGU13962.1 (CoA-binding protein [Geobacteraceae bacterium GWC2_53_11]) HSP 1 Score: 137.5 bits (345), Expect = 3.100e-29 Identity = 67/126 (53.17%), Postives = 92/126 (73.02%), Query Frame = 0
Query: 9 FLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSET-AVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGF 134
FL++ F VVGAST R+K+GNKVLRCYLQ+G+KAIP+NP E EIEG+ C+A +S L PSE ++S++TPPAVT+ ++ A GIK++W+QPG E P+A+A G+ +I G C LV LG+
Sbjct: 10 FLASPAFGVVGASTNRQKYGNKVLRCYLQNGRKAIPVNPNEPEIEGVACVATISDL--PSEVESISMVTPPAVTLQLVPLAVAKGIKNIWMQPGAEHPDAVALCREQGI--NVIADGSCALVVLGY 131
BLAST of NO21G01770 vs. NCBI_GenBank
Match: WP_094092082.1 (CoA-binding protein [Legionella clemsonensis] >ASQ47333.1 CoA binding domain protein [Legionella clemsonensis]) HSP 1 Score: 137.5 bits (345), Expect = 3.100e-29 Identity = 68/129 (52.71%), Postives = 94/129 (72.87%), Query Frame = 0
Query: 5 KFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGF 134
+ + FLS+ + VVGAS+RR KFGNKVLRCYLQ+GK A P+NP E IEG+ +AN+S L E ++S+ITP AVT ++E+A + GIK++W+QPG ES +AI ++ + +I GGPC+LVELGF
Sbjct: 6 QINQFLSSNAYGVVGASSRRHKFGNKVLRCYLQNGKTAYPVNPGESMIEGIASVANVSDLPASVE-SISIITPAAVTEKIVEEAIRKGIKNIWMQPGAESEKAIERCKKSQV--NVIAGGPCLLVELGF 131
BLAST of NO21G01770 vs. NCBI_GenBank
Match: WP_053552079.1 (CoA-binding protein [Desulfuromonas soudanensis] >ALC18133.1 putative CoA-binding protein [Desulfuromonas soudanensis]) HSP 1 Score: 137.1 bits (344), Expect = 4.100e-29 Identity = 67/135 (49.63%), Postives = 97/135 (71.85%), Query Frame = 0
Query: 5 KFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSET-AVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGFEGRDH 139
+ + FLS+ F V GAST R+K+GNK+LRCYLQ GKKA+PINPR ++IEG+ C+ +++ L P + ++SVITPP +T +V+E A GI ++W+QPG ESP A+A ++ G+ +I G C+LV LG+ RDH
Sbjct: 4 RIAKFLSSPAFGVAGASTNRDKYGNKILRCYLQHGKKAVPINPRAEKIEGIDCVPSVAEL--PDDVRSLSVITPPKITEAVVEAAIARGIDNIWMQPGAESPAAVAACQKAGV--NVIADGSCLLVVLGY--RDH 132
BLAST of NO21G01770 vs. NCBI_GenBank
Match: WP_082820156.1 (hypothetical protein [Desulfuromonas sp. DDH964] >AMV71060.1 Rossmann fold nucleotide-binding protein [Desulfuromonas sp. DDH964]) HSP 1 Score: 137.1 bits (344), Expect = 4.100e-29 Identity = 68/134 (50.75%), Postives = 96/134 (71.64%), Query Frame = 0
Query: 5 KFSPFLSATTFAVVGASTRREKFGNKVLRCYLQDGKKAIPINPREKEIEGLPCLANLSFLTCPSETAVSVITPPAVTVSVLEQAAKLGIKHVWLQPGCESPEAIATAERVGLLPTLIFGGPCVLVELGFEGRDH 139
+ + FL+A+ F VVGAS+ R+K+GNKV+RCY Q + IP+NPRE+ IEG+PC+A +S L P T++S+ITPP+VT V++ A GI+++W+QPG ES AIAT E G+ LI G C+LV LG+ R+H
Sbjct: 337 RIATFLAASAFGVVGASSNRDKYGNKVVRCYQQRNRTVIPVNPREEVIEGIPCVARVSDLP-PEATSISIITPPSVTEQVVKVAIAHGIRNIWMQPGAESAAAIATCEAEGV--NLIADGSCLLVVLGY--REH 465 The following BLAST results are available for this feature:
BLAST of NO21G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01770 ID=NO21G01770|Name=NO21G01770|organism=Nannochloropsis oceanica|type=gene|length=1221bpback to top protein sequence of NO21G01770.1 >NO21G01770.1-protein ID=NO21G01770.1-protein|Name=NO21G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bpback to top Synonyms
Publications
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