NO21G01610, NO21G01610 (gene) Nannochloropsis oceanica

Overview
NameNO21G01610
Unique NameNO21G01610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2261
Alignment locationchr21:481824..484084 +

Link to JBrowse

Properties
Property NameValue
DescriptionTrna dimethylallyltransferase 9
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:481824..484084 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR018022IPP_trans
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Homology
BLAST of NO21G01610 vs. NCBI_GenBank
Match: EWM22660.1 (trna dimethylallyltransferase 9 [Nannochloropsis gaditana])

HSP 1 Score: 423.7 bits (1088), Expect = 6.000e-115
Identity = 216/304 (71.05%), Postives = 250/304 (82.24%), Query Frame = 0
Query:   71 MSTSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMTS----------PPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSKEGVKNKEEEAVALK 365
            MS S    SRPKV+V+TGPTAVGKSNLAL +C++ +    GEII+VDSVQVYR LD+GSNKPS+ E+A VPHHLLDVL+ ++PEAFTAGDFVRKAEEAIDD LARG +PVVVGGTSMYTQWLVQGRPDAPKSDPE+E +AR +LAPF +K DW+GGL+LL A N +RA+KLHANDWYRLERALEV   TS          PPS   S+ S SSF G+RSQ+L+ KYDFRCFFLIA REELC +ID+RCLQMVE GLLEETA LL+AG L+PSSPPGRAIGYRQ IEYLSKEG++ +  EA AL+
Sbjct:   64 MSASRAGGSRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPS--PSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQ 365          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: CBJ48350.1 (putative tRNA isopentenyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 271.9 bits (694), Expect = 2.900e-69
Identity = 146/264 (55.30%), Postives = 179/264 (67.80%), Query Frame = 0
Query:   88 GPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMTSPPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSKE 352
            GPTA GKS++AL LCR+    + GEI++ DSVQVYR + IG NKPS EE  EV HHL+DV      E FTAGDFV++AE AIDD L+RGR+PVVVGGT MY  WLV G+PDAPK DP V       L PF ++ DW+G L LLAA N  RA+ +  NDWYRL R+LEV  + +             F GVR+  +  KYDFR FF+I  RE L   ID+RC +M+ +GLL ETA LL  G+LDP+SP GRAIGYRQAI++L +E
Sbjct:   76 GPTATGKSSIALALCRD----LGGEIVSCDSVQVYRDVFIGCNKPSPEEMKEVRHHLVDVAP--LDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSRRAASMAKNDWYRLSRSLEVLRVPNDTGE-------EVFTGVRA-PINKKYDFRSFFIIGDRERLFRRIDKRCEEMLMRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLHQE 325          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: KOO34112.1 (tRNA dimethylallyltransferase 9 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 245.4 bits (625), Expect = 2.900e-61
Identity = 130/238 (54.62%), Postives = 163/238 (68.49%), Query Frame = 0
Query:  111 GEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMTSPPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYL 349
            GE+I+VDSVQVYR L IG+NKPS +E+A + HHLLDV +P+  E +TAG F   A  A+++ LARGR+PV+VGGTSMY +WLV GRP+APK+DP +  + R +LAP +    W  GL  LAA +  RA  L  NDWYRL RAL V   TS  S+ ++        G+   +L S  D RCFFL APRE LC  ID RC  M+E GLLEE +SLL++G L PSSP GRAIGYRQ ++YL
Sbjct:    9 GELISVDSVQVYRGLQIGANKPSADERARIVHHLLDVRDPD--EEYTAGAFYADALRAVEEVLARGRVPVLVGGTSMYLRWLVSGRPEAPKADPAIAERVRLLLAPLEASGSWAEGLEQLAALDGARAEMLSRNDWYRLSRALTVALQTS--STAAALPRLPDPEGL--DALRSSLDLRCFFLAAPREALCRRIDARCEAMLEAGLLEEVSSLLASGRLLPSSPAGRAIGYRQVLDYL 240          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_018468442.1 (PREDICTED: tRNA dimethylallyltransferase 9-like [Raphanus sativus])

HSP 1 Score: 230.3 bits (586), Expect = 9.800e-57
Identity = 139/335 (41.49%), Postives = 189/335 (56.42%), Query Frame = 0
Query:   46 GPVCPRLFLQRLY--SCHLTDRFRVASMSTSSTSPS------RPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF-----------SSSSSCSSFN--------GVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351
            G V  R F  RL      L  RF   + +  S SP+      + KVIVI+GPT  GKS LAL L +     + GEII+ DSVQVY+ LD+GS KPS  ++ EVPHHL+D+L P+  + ++ G F     EA  D L+RGR+P+V GGT +Y +W + G+PD PK  PE+  +   +L  FQ + +W+G +  +      +AS L  NDWYRL R+LE+   T SPPSSF           +S  + + F+         ++S      YDF CFFL +PR +L   ID RC  M+   +G+L E   LL  G+L  +S   RAIGYRQA+EYLSK
Sbjct:    7 GVVLTRTFSSRLQPPCLVLRRRFCGGAATACSVSPNGKRNSEKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYKGLDVGSAKPSARDRKEVPHHLIDILHPS--QDYSVGQFFEDGREATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVHDMLIDFQTEYNWDGAVEFVVNAGVQKASSLARNDWYRLRRSLEILKTTGSPPSSFRVPYDSFRENLNSPDANNDFDENGSSADISIQSIKTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGAEGVLSEARWLLDLGLLPNTSSATRAIGYRQAMEYLSK 335          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_018467979.1 (PREDICTED: tRNA dimethylallyltransferase 9 [Raphanus sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.300e-56
Identity = 137/335 (40.90%), Postives = 188/335 (56.12%), Query Frame = 0
Query:   46 GPVCPRLFLQRLYSCHLTDRFRVASMSTSSTSPS--------RPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF-----------SSSSSCSSFN--------GVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351
            G V  R F  RL    L  R R    + ++ S S        + KVIVI+GPT  GKS LAL L +     + GEII+ DSVQVY+ LD+GS KPS  ++ EVPHHL+D+L P+  + ++ G F     EA  D L+RGR+P+V GGT +Y +W + G+PD PK  PE+  +   +L  FQ + +W+G +  +      +AS L  NDWYRL R+LE+   T SPPSSF           +S  + + F+         +++      YDF CFFL +PR +L   ID RC  M+   +G+L E   LL  G+L  +S   RAIGYRQA+EYLSK
Sbjct:    7 GVVLTRTFSSRLQPPRLLFRRRFCGGANTACSVSPNGKRNSEKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYKGLDVGSAKPSARDRKEVPHHLIDILHPS--QDYSVGQFFEDGREATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVHDMLIDFQTEYNWDGAVEFVVNAGDQKASSLARNDWYRLRRSLEILKTTGSPPSSFRVPYDSFRDNLNSPDANNDFDENGSSADISIQNIKTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGAEGVLSEARWLLDLGLLPNTSSATRAIGYRQAMEYLSK 335          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_023879786.1 (tRNA dimethylallyltransferase 9 [Quercus suber] >POE76473.1 trna dimethylallyltransferase 9 [Quercus suber])

HSP 1 Score: 228.4 bits (581), Expect = 3.700e-56
Identity = 138/323 (42.72%), Postives = 183/323 (56.66%), Query Frame = 0
Query:   54 LQRLYSCHLTD--------RFRVASMSTSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF-----SSSSSCS----SFNGV--------RSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYL 349
            L  L +C L D        R RV S + +     + KVIVI+GPT  GKS LAL L +     + GEII+ DSVQVYR LD+GS KPS  E+ EVPHHL+D+L P+  E ++ G F   A +A  + L  GR+P+VVGGT +Y +W + G+PD PK+ PE+  +    LA  Q   DW+  + L+      +A  L ANDWYRL R+LE+   + SPPS+F     S    CS    S +GV         ++S    YDF CFFL + R +L  +ID RC  M+    G+L E   LL  G+L  S+   RAIGYRQA+EYL
Sbjct:    2 LSGLRTCCLPDKPIHLHLFRRRVFSTACAVNKKKKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYRGLDVGSAKPSPSERKEVPHHLIDILHPS--EEYSVGQFFEDARQATRNILNTGRVPIVVGGTGLYLRWFIYGKPDVPKASPEIASEVYSELADLQRNEDWDAAVQLVVKAGDPKAQLLAANDWYRLRRSLEIIKSSGSPPSAFRVPYDSFKEQCSNVTDSSHGVNYSTDALEENKSKDLDYDFNCFFLSSQRLDLYRLIDYRCEDMLSGGDGILSEAKWLLDTGLLPNSNSATRAIGYRQAMEYL 318          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: KFK26250.1 (hypothetical protein AALP_AA8G222700 [Arabis alpina])

HSP 1 Score: 228.0 bits (580), Expect = 4.900e-56
Identity = 129/302 (42.72%), Postives = 179/302 (59.27%), Query Frame = 0
Query:   68 VASMSTSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSFS----------SSSSCSSFNG--------VRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYL 349
            V + S  ++S  + KVIVI+GPT  GKS LAL L    ++S+ GEII+ DSVQVYR LD+GS KPS  ++ EVPHHL+D+L P+  + ++ G F     +A  D L+RGR+P+V GGT +Y +W + G+PD PK  PEV  +   +LA F ++N+W+  +  +      +AS L  NDWYRL R+LE+   T SPPSSF           +S   +  +G        +++      YDF CFFL +PR +L   ID RC  MV+   GLL E   LL  G+   ++   RAIGYRQA+EYL
Sbjct:   31 VTASSVGTSSKKKEKVIVISGPTGAGKSRLALEL----AKSLNGEIISADSVQVYRGLDVGSAKPSASDRKEVPHHLIDILHPS--QDYSVGQFFDDGRQATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEVISEVHELLAGFHSENNWDAAVEFVVNAGDQKASSLARNDWYRLRRSLEILKTTGSPPSSFRVPYDSFRENLNSPDVNDIHGNGEAADISIQNIQTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMVKGADGLLSEARWLLDIGMRPNTNSATRAIGYRQAMEYL 326          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_013616100.1 (PREDICTED: tRNA dimethylallyltransferase 9-like isoform X2 [Brassica oleracea var. oleracea])

HSP 1 Score: 226.9 bits (577), Expect = 1.100e-55
Identity = 136/334 (40.72%), Postives = 186/334 (55.69%), Query Frame = 0
Query:   46 GPVCPRLFLQRLYSCHLTDRFRVASMSTSST-------SPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSFS-------------------SSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351
            G V  R    RL   +L  R R +  +T+ +       +  + KVIVI+GPT  GKS LAL L    ++ + GEII+ DSVQVY+ LD+GS KPS  ++ EVPHHL+D+L P+    ++ G F     +A  D L+RGR+P+V GGT +Y +W + G+PD PK  PE+  +   +L  FQN+ +W+G +  +      +AS L  NDWYRL R+LE+   T SPPSSF                      +S S+   V+       YDF CFFL +PR +L   ID RC  M+    G+L E   LL  G+L  +S   RAIGYRQA+EYLSK
Sbjct:    7 GLVLTRTCSSRLQPPYLVLRRRFSGGATACSVSLNGKRNSEKEKVIVISGPTGAGKSRLALEL----AKCLNGEIISADSVQVYKGLDVGSAKPSATDRKEVPHHLIDILHPS--RDYSVGQFFEDGRQATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVYDMLIDFQNEYNWDGAVEFVVNAGDQKASSLPRNDWYRLRRSLEILKSTGSPPSSFPVPYDSFRENLNSHDANNDFDENSSSADISVQKIETDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGANGVLTEARWLLDLGLLPNTSSATRAIGYRQAMEYLSK 334          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_021890256.1 (tRNA dimethylallyltransferase 9 [Carica papaya] >XP_021890257.1 tRNA dimethylallyltransferase 9 [Carica papaya])

HSP 1 Score: 226.5 bits (576), Expect = 1.400e-55
Identity = 137/329 (41.64%), Postives = 184/329 (55.93%), Query Frame = 0
Query:   49 CPRLFLQRLYSCHLTDRFRVASMSTSSTSPS------RPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF----------SSSSSCSSFNGVRSQSLTSK--------YDFRCFFLIAPREELCHVIDQRCLQMV--EKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351
            C +L   R +      R R  + +T S S +      + KVIVI+GPT  GKS LAL L +     + GEII+ DSVQVYR+LDIGS KPS  ++ EVPHHL+D+L P+  E ++ G F   A +   D L RG +P+V GGT +Y +W + G+PD PKS PE+  +    L   Q  +DW+  + L+      +A+ L ANDWYRL R+LE+   + SPPS+F          S S+    F  + S S   +        YDF CFFL +PR +L   ID RC  M+    GLL E + LL  G+L  S+   RAIGYRQA+EYL K
Sbjct:   12 CLQLQRHRPFLASFASRRRFCANTTCSVSVNGKKKNEKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYRSLDIGSAKPSLIDRKEVPHHLVDILHPS--EEYSVGQFCEDARQVTQDILNRGHVPIVTGGTGLYLRWFIYGKPDVPKSSPEIASEVHSELENLQRDDDWDAAVQLVVKAGDPKANMLAANDWYRLRRSLEIIKSSGSPPSAFHVPYDLFREKSVSNGKDGFEDIDSSSDVPEQIVPNNLDYDFICFFLSSPRIDLYRSIDLRCEDMLSGRDGLLSEASCLLDMGLLPNSNSATRAIGYRQAMEYLVK 334          
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_006400569.1 (tRNA dimethylallyltransferase 9 [Eutrema salsugineum] >ESQ42022.1 hypothetical protein EUTSA_v10013462mg [Eutrema salsugineum])

HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55
Identity = 128/300 (42.67%), Postives = 175/300 (58.33%), Query Frame = 0
Query:   72 STSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSFS----------SSSSCSSFNGVRSQSLTS--------KYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351
            S +  S  + KVIVI+GPT  GKS LAL L +     + GEII+ DSVQVYR LD+GS KPS  ++ EVPHHL+D+L P+  + ++ G F     +A  D L+RGR+P+V GGT +Y +W + G+PD PK  PE+  +   +L  FQ +++W+  +  +      +AS L  NDWYRL R+LE+   T SPPSSF           +S   + F+G  S +  S         YDF CFFL +PR +L   ID RC  M+    G+L E   LL  G+L  ++   RAIGYRQA+EYL K
Sbjct:   43 SKNKKSSGKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYRGLDVGSAKPSASDRKEVPHHLIDILHPS--QDYSVGQFFDDGRQAAKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIISEVHDMLVGFQTEHNWDAAVEFVVNAGDQKASSLTRNDWYRLRRSLEILKSTGSPPSSFRVPYDSFRDNLNSPDANDFDGDGSSAEVSIQNIQTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGADGVLSEARWLLDLGLLPNTNSSTRAIGYRQAMEYLLK 336          
The following BLAST results are available for this feature:
BLAST of NO21G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22660.16.000e-11571.05trna dimethylallyltransferase 9 [Nannochloropsis g... [more]
CBJ48350.12.900e-6955.30putative tRNA isopentenyltransferase [Ectocarpus s... [more]
KOO34112.12.900e-6154.62tRNA dimethylallyltransferase 9 [Chrysochromulina ... [more]
XP_018468442.19.800e-5741.49PREDICTED: tRNA dimethylallyltransferase 9-like [R... [more]
XP_018467979.11.300e-5640.90PREDICTED: tRNA dimethylallyltransferase 9 [Raphan... [more]
XP_023879786.13.700e-5642.72tRNA dimethylallyltransferase 9 [Quercus suber] >P... [more]
KFK26250.14.900e-5642.72hypothetical protein AALP_AA8G222700 [Arabis alpin... [more]
XP_013616100.11.100e-5540.72PREDICTED: tRNA dimethylallyltransferase 9-like is... [more]
XP_021890256.11.400e-5541.64tRNA dimethylallyltransferase 9 [Carica papaya] >X... [more]
XP_006400569.11.800e-5542.67tRNA dimethylallyltransferase 9 [Eutrema salsugine... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL025nonsL025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR060ngnoR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004638NSK004638Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01610.1NO21G01610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO21G01610.2NO21G01610.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602561gene_8120Nannochloropsis oceanica (N. oceanica CCMP1779)gene
IPPgene7795Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01610.1NO21G01610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO21G01610.2NO21G01610.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01610 ID=NO21G01610|Name=NO21G01610|organism=Nannochloropsis oceanica|type=gene|length=2261bp
TGATTGAGGGAGAGAGAGGGAGTCAGCATCGTGGTTCTGTACCCTAGGAG
GTGGCCTCGCCATCGCCAACAGAAGCAGATCGGTGCTGCCTTGTCCCAAT
GGAGCCCGACACAATCAACAGCAGCAAAACGAGCTACACTCGCACCAACA
CAACGAGCAGAAGGCGTGGATTGCAATCGCAGTGCTAAGGCACCGGGGTG
AAAAGGCAGAGCAGGCAAAACACATATCATGTATAGATCGACGTGGCATC
AAGGAGACTCTCGGAGGAGGTTATTAAAGGTCATTCAACCAATCTCACAA
AAAGTCTTATGAATCAAAATCAACCGGAAAATTAAAAACCTAAAACGAAC
ATACGCCATTCGCACATACATAGTGATAACAACGCCGATCATCCAGTGAC
CAAGGCCTTTTCCATGGCGGCATGATCCTCCGCGCCTTCTCCCTTCCTGC
AATCCTCCTCCTCGTCTTTCTCTGCAACTGCCTTCTATTAATGGTCCTCG
CCTCAGCAGCCTCAGCAGCCACTACAACCATTTTCATCGTGAACAAAATC
CTCCTTGGCCCTGTGTGCCCTCGCTTATTCCTACAGCGCTTGTACTCGTG
TCACCTTACCGACAGATTCCGCGTCGCCAGTATGTCTACCTCCTCCACCT
CTCCCTCACGACCCAAAGTCATTGTCATCACAGGCCCTACGGCCGTGGGC
AAATCCAACCTAGCTTTGACACTTTGTCGAAATGCCTCCCAGTCTGTGAC
AGGGGAGATAATTACGGTGGACTCCGTTCAAGTCTATCGAGCGTTGGATA
TTGGGTCGAACAAACCCTCAAAGGAAGAACAGGCTGAGGTCCCCCACCAC
TTACTCGATGTCCTGGAGCCCAATGCCCCCGAGGCCTTCACCGCGGGTGA
TTTCGTCCGGAAAGCAGAGGAAGCGATTGATGACGCTTTGGCACGCGGAA
GAATACCGGTGGTGGTAGGCGGGACGTCTATGTATACGCAGTGGCTGGTG
CAGGGACGGCCGGACGCCCCAAAGTCGGACCCTGAGGTGGAGTTAAAGGC
AAGAGGGATACTGGCACCTTTTCAGAACAAAAATGATTGGGAGgttagtg
atgtgatatgtggggggaagcataggctgttgagtgccttttctgaagat
acaggaagtggcctacaaattattccttttccccttctctccccccccct
tcccacttttatcaacacacagGGCGGCCTGGCTCTCTTAGCCGCCCGGA
ACCCCGATCGCGCCAGCAAGCTACATGCTAACGATTGGTACCGCCTTGAA
CGTGCCCTAGAGGTCACTTTCATGACTTCCCCCCCTTCCTCTTTCTCCTC
CTCCTCTTCCTGCTCCTCTTTTAATGGCGTCCGCTCCCAATCGCTAACCA
GCAAATACGACTTTCGCTGTTTTTTCCTCATAGCCCCGCGGGAAGAACTC
TGCCACGTCATAGATCAACGCTGTCTTCAAATGGTCGAAAAAGGGCTCCT
GGAAGAAACTGCCTCTCTGTTATCTGCAGGCGTCCTAGACCCTTCATCAC
CCCCAGGGCGCGCCATTGGCTATAGACAAGCAATTGAGTATTTGAGCAAG
GAAGGAGTGAAGAATAAGGAGGAGGAAGCTGTAGCATTGAAGgtaagtag
gcaggaaaggaggttagagaggtttcttttccaactaccggcctgaaatt
ttttccatccctgactgaatttttatttcatccccatatatcgttttacc
cctttcctcccttcctccctcccaccctccccccctccctcagCTCTTCC
TCAAGGATTTTGCCACAGCCACCCGTCGCTACGCCAAGCAACAAATGGTG
TGGTATCGAGCGCAGCCTGAGTTCATCTGGTTGAGATGGAACCTGCTCGA
CCTCGCTCCCGCTCTCGCCTCCCTTCATGCCTCCTTTAAGGAGGACGAGA
TGAGTCATTTCGAGAGGAGGAGGGGGGGCGCGCAAGAAGCATTGAGGAAG
GAGAACATGATGGAAGGAAAGAGAATGAAGGCGTACACGTCGAAGATATT
GGAAGGACTGACAGGGGACAAGTTGGAAACGTTGGTTAGGAGAGCGACAG
ATTGCAGAGCGCAGGTGCTGGCAGCAGCAGCAGCTGCAGATAAAAGATAG
GGACAACGCGTCCATAGAGAGAGGAACAAGGGAGACCTAGAAAGGAGTTT
GGAAAAAAATGTGTACAGTAGGCCTTAACAAAGAGAGGCTAAAGAAGAAG
ACGAAATCATC
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protein sequence of NO21G01610.1

>NO21G01610.1-protein ID=NO21G01610.1-protein|Name=NO21G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=483bp
MILRAFSLPAILLLVFLCNCLLLMVLASAASAATTTIFIVNKILLGPVCP
RLFLQRLYSCHLTDRFRVASMSTSSTSPSRPKVIVITGPTAVGKSNLALT
LCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEP
NAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAP
KSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLE
RALEVTFMTSPPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREEL
CHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK
EGVKNKEEEAVALKLFLKDFATATRRYAKQQMVWYRAQPEFIWLRWNLLD
LAPALASLHASFKEDEMSHFERRRGGAQEALRKENMMEGKRMKAYTSKIL
EGLTGDKLETLVRRATDCRAQVLAAAAAADKR*
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protein sequence of NO21G01610.2

>NO21G01610.2-protein ID=NO21G01610.2-protein|Name=NO21G01610.2|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MILRAFSLPAILLLVFLCNCLLLMVLASAASAATTTIFIVNKILLGPVCP
RLFLQRLYSCHLTDRFRVASMSTSSTSPSRPKVIVITGPTAVGKSNLALT
LCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEP
NAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAP
KSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLE
RALEVTFMTSPPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREEL
CHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK
EGVKNKEEEAVALKVSRQERRLERFLFQLPA*
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Synonyms
Publications