NO21G01610, NO21G01610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01610 vs. NCBI_GenBank
Match: EWM22660.1 (trna dimethylallyltransferase 9 [Nannochloropsis gaditana]) HSP 1 Score: 423.7 bits (1088), Expect = 6.000e-115 Identity = 216/304 (71.05%), Postives = 250/304 (82.24%), Query Frame = 0 Query: 71 MSTSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMTS----------PPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSKEGVKNKEEEAVALK 365 MS S SRPKV+V+TGPTAVGKSNLAL +C++ + GEII+VDSVQVYR LD+GSNKPS+ E+A VPHHLLDVL+ ++PEAFTAGDFVRKAEEAIDD LARG +PVVVGGTSMYTQWLVQGRPDAPKSDPE+E +AR +LAPF +K DW+GGL+LL A N +RA+KLHANDWYRLERALEV TS PPS S+ S SSF G+RSQ+L+ KYDFRCFFLIA REELC +ID+RCLQMVE GLLEETA LL+AG L+PSSPPGRAIGYRQ IEYLSKEG++ + EA AL+ Sbjct: 64 MSASRAGGSRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPS--PSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQ 365
BLAST of NO21G01610 vs. NCBI_GenBank
Match: CBJ48350.1 (putative tRNA isopentenyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 271.9 bits (694), Expect = 2.900e-69 Identity = 146/264 (55.30%), Postives = 179/264 (67.80%), Query Frame = 0 Query: 88 GPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMTSPPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSKE 352 GPTA GKS++AL LCR+ + GEI++ DSVQVYR + IG NKPS EE EV HHL+DV E FTAGDFV++AE AIDD L+RGR+PVVVGGT MY WLV G+PDAPK DP V L PF ++ DW+G L LLAA N RA+ + NDWYRL R+LEV + + F GVR+ + KYDFR FF+I RE L ID+RC +M+ +GLL ETA LL G+LDP+SP GRAIGYRQAI++L +E Sbjct: 76 GPTATGKSSIALALCRD----LGGEIVSCDSVQVYRDVFIGCNKPSPEEMKEVRHHLVDVAP--LDETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSRRAASMAKNDWYRLSRSLEVLRVPNDTGE-------EVFTGVRA-PINKKYDFRSFFIIGDRERLFRRIDKRCEEMLMRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLHQE 325
BLAST of NO21G01610 vs. NCBI_GenBank
Match: KOO34112.1 (tRNA dimethylallyltransferase 9 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 245.4 bits (625), Expect = 2.900e-61 Identity = 130/238 (54.62%), Postives = 163/238 (68.49%), Query Frame = 0 Query: 111 GEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMTSPPSSFSSSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVEKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYL 349 GE+I+VDSVQVYR L IG+NKPS +E+A + HHLLDV +P+ E +TAG F A A+++ LARGR+PV+VGGTSMY +WLV GRP+APK+DP + + R +LAP + W GL LAA + RA L NDWYRL RAL V TS S+ ++ G+ +L S D RCFFL APRE LC ID RC M+E GLLEE +SLL++G L PSSP GRAIGYRQ ++YL Sbjct: 9 GELISVDSVQVYRGLQIGANKPSADERARIVHHLLDVRDPD--EEYTAGAFYADALRAVEEVLARGRVPVLVGGTSMYLRWLVSGRPEAPKADPAIAERVRLLLAPLEASGSWAEGLEQLAALDGARAEMLSRNDWYRLSRALTVALQTS--STAAALPRLPDPEGL--DALRSSLDLRCFFLAAPREALCRRIDARCEAMLEAGLLEEVSSLLASGRLLPSSPAGRAIGYRQVLDYL 240
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_018468442.1 (PREDICTED: tRNA dimethylallyltransferase 9-like [Raphanus sativus]) HSP 1 Score: 230.3 bits (586), Expect = 9.800e-57 Identity = 139/335 (41.49%), Postives = 189/335 (56.42%), Query Frame = 0 Query: 46 GPVCPRLFLQRLY--SCHLTDRFRVASMSTSSTSPS------RPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF-----------SSSSSCSSFN--------GVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351 G V R F RL L RF + + S SP+ + KVIVI+GPT GKS LAL L + + GEII+ DSVQVY+ LD+GS KPS ++ EVPHHL+D+L P+ + ++ G F EA D L+RGR+P+V GGT +Y +W + G+PD PK PE+ + +L FQ + +W+G + + +AS L NDWYRL R+LE+ T SPPSSF +S + + F+ ++S YDF CFFL +PR +L ID RC M+ +G+L E LL G+L +S RAIGYRQA+EYLSK Sbjct: 7 GVVLTRTFSSRLQPPCLVLRRRFCGGAATACSVSPNGKRNSEKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYKGLDVGSAKPSARDRKEVPHHLIDILHPS--QDYSVGQFFEDGREATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVHDMLIDFQTEYNWDGAVEFVVNAGVQKASSLARNDWYRLRRSLEILKTTGSPPSSFRVPYDSFRENLNSPDANNDFDENGSSADISIQSIKTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGAEGVLSEARWLLDLGLLPNTSSATRAIGYRQAMEYLSK 335
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_018467979.1 (PREDICTED: tRNA dimethylallyltransferase 9 [Raphanus sativus]) HSP 1 Score: 229.9 bits (585), Expect = 1.300e-56 Identity = 137/335 (40.90%), Postives = 188/335 (56.12%), Query Frame = 0 Query: 46 GPVCPRLFLQRLYSCHLTDRFRVASMSTSSTSPS--------RPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF-----------SSSSSCSSFN--------GVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351 G V R F RL L R R + ++ S S + KVIVI+GPT GKS LAL L + + GEII+ DSVQVY+ LD+GS KPS ++ EVPHHL+D+L P+ + ++ G F EA D L+RGR+P+V GGT +Y +W + G+PD PK PE+ + +L FQ + +W+G + + +AS L NDWYRL R+LE+ T SPPSSF +S + + F+ +++ YDF CFFL +PR +L ID RC M+ +G+L E LL G+L +S RAIGYRQA+EYLSK Sbjct: 7 GVVLTRTFSSRLQPPRLLFRRRFCGGANTACSVSPNGKRNSEKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYKGLDVGSAKPSARDRKEVPHHLIDILHPS--QDYSVGQFFEDGREATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVHDMLIDFQTEYNWDGAVEFVVNAGDQKASSLARNDWYRLRRSLEILKTTGSPPSSFRVPYDSFRDNLNSPDANNDFDENGSSADISIQNIKTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGAEGVLSEARWLLDLGLLPNTSSATRAIGYRQAMEYLSK 335
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_023879786.1 (tRNA dimethylallyltransferase 9 [Quercus suber] >POE76473.1 trna dimethylallyltransferase 9 [Quercus suber]) HSP 1 Score: 228.4 bits (581), Expect = 3.700e-56 Identity = 138/323 (42.72%), Postives = 183/323 (56.66%), Query Frame = 0 Query: 54 LQRLYSCHLTD--------RFRVASMSTSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF-----SSSSSCS----SFNGV--------RSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYL 349 L L +C L D R RV S + + + KVIVI+GPT GKS LAL L + + GEII+ DSVQVYR LD+GS KPS E+ EVPHHL+D+L P+ E ++ G F A +A + L GR+P+VVGGT +Y +W + G+PD PK+ PE+ + LA Q DW+ + L+ +A L ANDWYRL R+LE+ + SPPS+F S CS S +GV ++S YDF CFFL + R +L +ID RC M+ G+L E LL G+L S+ RAIGYRQA+EYL Sbjct: 2 LSGLRTCCLPDKPIHLHLFRRRVFSTACAVNKKKKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYRGLDVGSAKPSPSERKEVPHHLIDILHPS--EEYSVGQFFEDARQATRNILNTGRVPIVVGGTGLYLRWFIYGKPDVPKASPEIASEVYSELADLQRNEDWDAAVQLVVKAGDPKAQLLAANDWYRLRRSLEIIKSSGSPPSAFRVPYDSFKEQCSNVTDSSHGVNYSTDALEENKSKDLDYDFNCFFLSSQRLDLYRLIDYRCEDMLSGGDGILSEAKWLLDTGLLPNSNSATRAIGYRQAMEYL 318
BLAST of NO21G01610 vs. NCBI_GenBank
Match: KFK26250.1 (hypothetical protein AALP_AA8G222700 [Arabis alpina]) HSP 1 Score: 228.0 bits (580), Expect = 4.900e-56 Identity = 129/302 (42.72%), Postives = 179/302 (59.27%), Query Frame = 0 Query: 68 VASMSTSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSFS----------SSSSCSSFNG--------VRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYL 349 V + S ++S + KVIVI+GPT GKS LAL L ++S+ GEII+ DSVQVYR LD+GS KPS ++ EVPHHL+D+L P+ + ++ G F +A D L+RGR+P+V GGT +Y +W + G+PD PK PEV + +LA F ++N+W+ + + +AS L NDWYRL R+LE+ T SPPSSF +S + +G +++ YDF CFFL +PR +L ID RC MV+ GLL E LL G+ ++ RAIGYRQA+EYL Sbjct: 31 VTASSVGTSSKKKEKVIVISGPTGAGKSRLALEL----AKSLNGEIISADSVQVYRGLDVGSAKPSASDRKEVPHHLIDILHPS--QDYSVGQFFDDGRQATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEVISEVHELLAGFHSENNWDAAVEFVVNAGDQKASSLARNDWYRLRRSLEILKTTGSPPSSFRVPYDSFRENLNSPDVNDIHGNGEAADISIQNIQTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMVKGADGLLSEARWLLDIGMRPNTNSATRAIGYRQAMEYL 326
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_013616100.1 (PREDICTED: tRNA dimethylallyltransferase 9-like isoform X2 [Brassica oleracea var. oleracea]) HSP 1 Score: 226.9 bits (577), Expect = 1.100e-55 Identity = 136/334 (40.72%), Postives = 186/334 (55.69%), Query Frame = 0 Query: 46 GPVCPRLFLQRLYSCHLTDRFRVASMSTSST-------SPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSFS-------------------SSSSCSSFNGVRSQSLTSKYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351 G V R RL +L R R + +T+ + + + KVIVI+GPT GKS LAL L ++ + GEII+ DSVQVY+ LD+GS KPS ++ EVPHHL+D+L P+ ++ G F +A D L+RGR+P+V GGT +Y +W + G+PD PK PE+ + +L FQN+ +W+G + + +AS L NDWYRL R+LE+ T SPPSSF +S S+ V+ YDF CFFL +PR +L ID RC M+ G+L E LL G+L +S RAIGYRQA+EYLSK Sbjct: 7 GLVLTRTCSSRLQPPYLVLRRRFSGGATACSVSLNGKRNSEKEKVIVISGPTGAGKSRLALEL----AKCLNGEIISADSVQVYKGLDVGSAKPSATDRKEVPHHLIDILHPS--RDYSVGQFFEDGRQATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVYDMLIDFQNEYNWDGAVEFVVNAGDQKASSLPRNDWYRLRRSLEILKSTGSPPSSFPVPYDSFRENLNSHDANNDFDENSSSADISVQKIETDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGANGVLTEARWLLDLGLLPNTSSATRAIGYRQAMEYLSK 334
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_021890256.1 (tRNA dimethylallyltransferase 9 [Carica papaya] >XP_021890257.1 tRNA dimethylallyltransferase 9 [Carica papaya]) HSP 1 Score: 226.5 bits (576), Expect = 1.400e-55 Identity = 137/329 (41.64%), Postives = 184/329 (55.93%), Query Frame = 0 Query: 49 CPRLFLQRLYSCHLTDRFRVASMSTSSTSPS------RPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSF----------SSSSSCSSFNGVRSQSLTSK--------YDFRCFFLIAPREELCHVIDQRCLQMV--EKGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351 C +L R + R R + +T S S + + KVIVI+GPT GKS LAL L + + GEII+ DSVQVYR+LDIGS KPS ++ EVPHHL+D+L P+ E ++ G F A + D L RG +P+V GGT +Y +W + G+PD PKS PE+ + L Q +DW+ + L+ +A+ L ANDWYRL R+LE+ + SPPS+F S S+ F + S S + YDF CFFL +PR +L ID RC M+ GLL E + LL G+L S+ RAIGYRQA+EYL K Sbjct: 12 CLQLQRHRPFLASFASRRRFCANTTCSVSVNGKKKNEKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYRSLDIGSAKPSLIDRKEVPHHLVDILHPS--EEYSVGQFCEDARQVTQDILNRGHVPIVTGGTGLYLRWFIYGKPDVPKSSPEIASEVHSELENLQRDDDWDAAVQLVVKAGDPKANMLAANDWYRLRRSLEIIKSSGSPPSAFHVPYDLFREKSVSNGKDGFEDIDSSSDVPEQIVPNNLDYDFICFFLSSPRIDLYRSIDLRCEDMLSGRDGLLSEASCLLDMGLLPNSNSATRAIGYRQAMEYLVK 334
BLAST of NO21G01610 vs. NCBI_GenBank
Match: XP_006400569.1 (tRNA dimethylallyltransferase 9 [Eutrema salsugineum] >ESQ42022.1 hypothetical protein EUTSA_v10013462mg [Eutrema salsugineum]) HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55 Identity = 128/300 (42.67%), Postives = 175/300 (58.33%), Query Frame = 0 Query: 72 STSSTSPSRPKVIVITGPTAVGKSNLALTLCRNASQSVTGEIITVDSVQVYRALDIGSNKPSKEEQAEVPHHLLDVLEPNAPEAFTAGDFVRKAEEAIDDALARGRIPVVVGGTSMYTQWLVQGRPDAPKSDPEVELKARGILAPFQNKNDWEGGLALLAARNPDRASKLHANDWYRLERALEVTFMT-SPPSSFS----------SSSSCSSFNGVRSQSLTS--------KYDFRCFFLIAPREELCHVIDQRCLQMVE--KGLLEETASLLSAGVLDPSSPPGRAIGYRQAIEYLSK 351 S + S + KVIVI+GPT GKS LAL L + + GEII+ DSVQVYR LD+GS KPS ++ EVPHHL+D+L P+ + ++ G F +A D L+RGR+P+V GGT +Y +W + G+PD PK PE+ + +L FQ +++W+ + + +AS L NDWYRL R+LE+ T SPPSSF +S + F+G S + S YDF CFFL +PR +L ID RC M+ G+L E LL G+L ++ RAIGYRQA+EYL K Sbjct: 43 SKNKKSSGKEKVIVISGPTGAGKSRLALELAKR----LNGEIISADSVQVYRGLDVGSAKPSASDRKEVPHHLIDILHPS--QDYSVGQFFDDGRQAAKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIISEVHDMLVGFQTEHNWDAAVEFVVNAGDQKASSLTRNDWYRLRRSLEILKSTGSPPSSFRVPYDSFRDNLNSPDANDFDGDGSSAEVSIQNIQTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGADGVLSEARWLLDLGLLPNTNSSTRAIGYRQAMEYLLK 336 The following BLAST results are available for this feature:
BLAST of NO21G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01610 ID=NO21G01610|Name=NO21G01610|organism=Nannochloropsis oceanica|type=gene|length=2261bpback to top protein sequence of NO21G01610.1 >NO21G01610.1-protein ID=NO21G01610.1-protein|Name=NO21G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=483bpback to top protein sequence of NO21G01610.2 >NO21G01610.2-protein ID=NO21G01610.2-protein|Name=NO21G01610.2|organism=Nannochloropsis oceanica|type=polypeptide|length=382bpback to top Synonyms
Publications
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