NO21G01470, NO21G01470 (gene) Nannochloropsis oceanica

Overview
NameNO21G01470
Unique NameNO21G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1063
Alignment locationchr21:442946..444008 -

Link to JBrowse

Properties
Property NameValue
DescriptionProteasome subunit beta type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:442946..444008 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0019538protein metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR023333Proteasome_suB-type
IPR001353Proteasome_sua/b
IPR000243Pept_T1A_subB
Homology
BLAST of NO21G01470 vs. NCBI_GenBank
Match: EWM22648.1 (proteasome subunit beta type 5 [Nannochloropsis gaditana])

HSP 1 Score: 515.4 bits (1326), Expect = 1.100e-142
Identity = 247/278 (88.85%), Postives = 261/278 (93.88%), Query Frame = 0
Query:    1 MHGIGTEILDLGKSLKAAAEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYGIDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEKVTRMVM 279
            MH IGT+ILDLGKSL+A  + G+ + P AKAEE GFLLPAVEDPA+FCK NFGVGYG D HQELKFAKGTTTLAFKFD GI+VAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQL+YVDNDGMRLKG+LFSVGSGSTYAYGVLDA+YRKDLSA++AIELGRRAIYHATHRDAYSGG+INVYHVQEQGWVKVFSGDC +LHYKYQEEK   M M
Sbjct:    1 MHAIGTDILDLGKSLRAGGKRGAILSPHAKAEEAGFLLPAVEDPASFCKTNFGVGYGTDQHQELKFAKGTTTLAFKFDGGIVVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLFYVDNDGMRLKGNLFSVGSGSTYAYGVLDAHYRKDLSADEAIELGRRAIYHATHRDAYSGGIINVYHVQEQGWVKVFSGDCNELHYKYQEEKTASMAM 278          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: CBN74512.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 397.9 bits (1021), Expect = 2.600e-107
Identity = 195/269 (72.49%), Postives = 219/269 (81.41%), Query Frame = 0
Query:    4 IGTEILDLGKSLKAAAEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYGIDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEK 273
            +GT ILD G     AA P  A         G F LP V +PAAFC AN G GYG D+ Q++KFAKGTTTLAFKF  GIIV+VDSRST G Y+ASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCR+YELR+KERISVAAASKLL+NT+ QYRGYGLSMGTM+ GWDKTGPQLYY D+DG RL G+LFSVGSGSTYAYGVLD +Y+ D++ E+AIELG+RAIYHATHRDAYSG + NVY V+  GWVKV +GD  D+HYK  EEK
Sbjct:    7 VGTSILDTGARKAPAAGPAEAQ----AGVPGMFGLPNVANPAAFCSANLGCGYGTDHAQDIKFAKGTTTLAFKFQGGIIVSVDSRSTMGPYIASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDDGTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVYIVKPTGWVKVHAGDVNDMHYKLAEEK 271          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: XP_002179855.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48841.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 362.5 bits (929), Expect = 1.200e-96
Identity = 183/274 (66.79%), Postives = 215/274 (78.47%), Query Frame = 0
Query:    4 IGTEILDLGKSLKAAAEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYG-IDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEKVTRM 277
            IG++ILD+G S KA  +    +        G F +P V DPA +C++NF    G  D  QE+KFAKGTTTLAFKF+ GIIV+VDSRST G Y+ASGTVKKVIEINP+LLGTMAGGAADCSFWERNLG++CRLYELR+  RI+VAAASKLLAN +  YRGYGLSMGTMITGWD+TGPQLYYVDNDG RLKG  FSVGSGS YAYGVLD ++R+DLS E+AI+LG+RAIYHATHRDA SGG+ N+YHV   GW  +   D  D+HY++ EEK   M
Sbjct:   10 IGSDILDIG-SRKALTKRQRGIGVDL-GVPGQFDVPNVPDPALYCRSNFASACGNADAGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGYYIASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGMECRLYELRNGRRITVAAASKLLANVMSAYRGYGLSMGTMITGWDETGPQLYYVDNDGTRLKGKYFSVGSGSMYAYGVLDNHWREDLSVEEAIDLGKRAIYHATHRDAASGGINNLYHVTADGWKYIHGIDVNDMHYEFAEEKKNAM 281          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: EJK48257.1 (hypothetical protein THAOC_32963 [Thalassiosira oceanica])

HSP 1 Score: 360.1 bits (923), Expect = 6.000e-96
Identity = 173/230 (75.22%), Postives = 197/230 (85.65%), Query Frame = 0
Query:   44 PAAFCKANFGVGYG-IDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEK 273
            PA FC+ NF    G  D  QE+KFAKGTTTLAFKF+ GIIV+VDSRST GAY+ASGTVKKVIEINP+LLGTMAGGAADCSFWERNLGIQCR+YELR+K+RISVAAASKLLANT+  YRGYGLSMGTMITGWD+TGPQLYYVD+DG RL G  FSVGSGSTYAYGVLD  YR DL+ E+AI+LG+RAIYHA HRDA SG + N+YHV + GWVK+ + D  D+HY++ EEK
Sbjct:   12 PAHFCRNNFASACGNSDQGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGAYIASGTVKKVIEINPFLLGTMAGGAADCSFWERNLGIQCRMYELRNKKRISVAAASKLLANTMRSYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGSINNLYHVTKDGWVKIHAIDTNDMHYQFMEEK 241          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: OEU13062.1 (LMP7-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 360.1 bits (923), Expect = 6.000e-96
Identity = 179/273 (65.57%), Postives = 217/273 (79.49%), Query Frame = 0
Query:    3 GIGTEILDLG--KSLKAAAEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYGI-DNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEK 273
            GIG +ILD+G  K+ +  A+P     P      G F +P V +PAA+C+ NF    G  D +Q++KFAKGTTTLAFKF  G+IV+VDSRST GAY+ASGTVKKVIEIN +LLGTMAGGAADCSFWERNLG++CRLY+LR+  RISVA+ASKLLAN +  YRGYGLSMGTMI GWD+ GPQLYYVD+DG RLKG +FSVGSGSTYAYG+LD  YR+DL+ E+AI+LG+RAIYHA HRDA SGG+ N+YH+ + G+VKV S D   +HY+Y EEK
Sbjct:   11 GIGNDILDIGSRKARRRGADPMMMGTP------GQFDVPNVSNPAAYCRNNFASVCGTGDENQDVKFAKGTTTLAFKFQGGVIVSVDSRSTMGAYIASGTVKKVIEINSFLLGTMAGGAADCSFWERNLGMECRLYQLRNGRRISVASASKLLANVMRSYRGYGLSMGTMIAGWDEKGPQLYYVDDDGTRLKGKMFSVGSGSTYAYGILDNYYREDLTVEEAIDLGKRAIYHAAHRDAASGGINNLYHMTKDGFVKVHSIDVNTMHYEYAEEK 277          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: GAX24332.1 (20S proteasome subunit beta 5 [Fistulifera solaris])

HSP 1 Score: 356.3 bits (913), Expect = 8.700e-95
Identity = 180/281 (64.06%), Postives = 220/281 (78.29%), Query Frame = 0
Query:    4 IGTEILDLGKSLKAA-------AEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYGI-DNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEKVTRM 277
            IG +ILD+G S KA        A+ G +         G F +P V+DPA +C ++F    G  D  QE+KFAKGTTTLAFKF+ GIIV+VDSR+TQG Y++S TVKKVIE+NPYLLGTMAGGAADCS+WER L +QCR+YELR+  RI+VAAASKLLA T+  YRGYGLSMGTMITGWD+TGPQLYYVD+DG RLKG +FSVGSGST+AYGVLD  YR+DL+ E+AI+LG+RAIYHATHRDA SGG+ N+YHV + GWVK+ + D  D+HY+++EEK   M
Sbjct:   11 IGDDILDIG-SRKAVDRYCGNKAQIGLSQ-DLLMGRPGAFDVPNVKDPALYCSSHFRSTCGTGDAGQEIKFAKGTTTLAFKFNGGIIVSVDSRATQGNYISSQTVKKVIEMNPYLLGTMAGGAADCSYWERRLNLQCRMYELRNGRRITVAAASKLLAGTMASYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLKGKMFSVGSGSTFAYGVLDNYYREDLTLEEAIDLGKRAIYHATHRDAASGGINNLYHVTKDGWVKIHAIDVNDMHYEFEEEKRNEM 289          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: XP_009038619.1 (hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens] >EGB06876.1 hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens])

HSP 1 Score: 353.6 bits (906), Expect = 5.600e-94
Identity = 171/261 (65.52%), Postives = 207/261 (79.31%), Query Frame = 0
Query:    8 ILDLGKSLKAAAEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYGIDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKY 269
            +LD+GK+ K   E  +A      A    F L  V DPAA+   NFGVGYG D+HQ++KFAKGTTTLAFKF+ G+I++VDSRST G Y+AS TVKKVIEINP+LLGTMAGGAADCSFWERNLG QCR++ELR+K R+SVAAASK+LANT+  YRG GLSMGTM+ GWD+TGPQLYYVD+DG RL G++F VGSGSTYAYGV+D+N R DL+  +AI+LGRRAI  A HRDAYSGG  N+YH++E GW  + + D  DL+Y Y
Sbjct:    9 VLDIGKAAKPEEEVSAA---AQLASPTSFALAPVVDPAAYSAQNFGVGYGTDHHQDVKFAKGTTTLAFKFNGGVIISVDSRSTMGPYIASQTVKKVIEINPFLLGTMAGGAADCSFWERNLGTQCRMFELRNKRRVSVAAASKMLANTMYSYRGRGLSMGTMVCGWDETGPQLYYVDDDGTRLHGNVFCVGSGSTYAYGVIDSNLRDDLTVPEAIDLGRRAIAGAAHRDAYSGGWNNLYHMKETGWEFIGAVDTNDLYYHY 266          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: GAX26048.1 (20S proteasome subunit beta 5 [Fistulifera solaris])

HSP 1 Score: 353.6 bits (906), Expect = 5.600e-94
Identity = 178/281 (63.35%), Postives = 220/281 (78.29%), Query Frame = 0
Query:    4 IGTEILDLGKSLKAA-------AEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKANFGVGYGI-DNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEKVTRM 277
            +G +ILD+G S KA        A+ G +         G F +P V+DPA +C ++F    G  D  QE+KFAKGTTTLAFKF+ GIIV+VDSR+TQG Y++S TVKKVIE+NPYLLGTMAGGAADCS+WER L +QCR+YELR+  RI+VAAASKLLA T+  YRGYGLSMGTMITGWD+TGPQLYYVD+DG RLKG +FSVGSGST+AYGVLD  YR+DL+ E+AI+LG+RAIYHAT+RDA SGG+ N+YHV + GWVK+ + D  D+HY+++EEK   M
Sbjct:    6 VGDDILDIG-SRKAVDRYCGNKAQLGLSQ-DLLMGRPGAFDVPNVKDPALYCSSHFRSTCGTGDAGQEIKFAKGTTTLAFKFNGGIIVSVDSRATQGNYISSQTVKKVIEMNPYLLGTMAGGAADCSYWERRLNLQCRMYELRNGRRITVAAASKLLAGTMASYRGYGLSMGTMITGWDETGPQLYYVDDDGTRLKGKMFSVGSGSTFAYGVLDNYYREDLTLEEAIDLGKRAIYHATYRDAASGGINNLYHVTKDGWVKIHAIDVNDMHYEFEEEKRNEM 284          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: AAM18885.1 (unknown [Branchiostoma floridae])

HSP 1 Score: 348.2 bits (892), Expect = 2.400e-92
Identity = 169/237 (71.31%), Postives = 195/237 (82.28%), Query Frame = 0
Query:   36 FLLPAVEDPAAFCKANFGVGYGIDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQEEK 273
            F +PAV DPA F K  F  G G   + +++F  GTTTLAFKF HG+IVAVDSR+T G+Y+AS TVKKVIEINPYLLGTMAGGAADCSFWER L  QCR+YELR+KERISVAAASKLLAN V  Y+G GLSMGTMI GWDK GP LYYVD+DG RL  ++FSVGSGSTYAYGVLD+ Y  D+  E+A ELG+RAIYHATHRDAYSGGV+N+YH++E GW+KV   D +DLHYKY+EEK
Sbjct:   42 FSIPAVTDPAEFLKP-FTTGEG---NVKIEFDHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERVLAEQCRIYELRNKERISVAAASKLLANIVYNYKGMGLSMGTMIVGWDKRGPGLYYVDSDGTRLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEAYELGKRAIYHATHRDAYSGGVVNLYHMKETGWIKVSQTDVMDLHYKYKEEK 274          
BLAST of NO21G01470 vs. NCBI_GenBank
Match: XP_004347536.2 (hypothetical protein CAOG_04785 [Capsaspora owczarzaki ATCC 30864] >KJE94093.1 hypothetical protein CAOG_004785 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 348.2 bits (892), Expect = 2.400e-92
Identity = 171/236 (72.46%), Postives = 195/236 (82.63%), Query Frame = 0
Query:   36 FLLPAVEDPAAFCKANFGVGYGIDNHQELK--FAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTVKKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASKLLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSGSTYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQEQGWVKVFSGDCVDLHYKYQ 270
            F +PAV+DPAAF  A     Y  D H ++K     GTTTLAFKF HGIIVAVDSR+T G+Y+ASGTVKKVIEINPYLLGTMAGGAADCSFWER L  +CR+YELR+KERISVAAASKLLAN V  Y+  GLSMGTMITGWDK GP+LYYVD+DG RL GD+FSVGSGSTYAYGVLDA +R D++ E+A ELGRR+IYHATHRDAYSGG +NVYHV+E+GWVK+ S D   LHY Y+
Sbjct:   70 FDVPAVQDPAAFLHA-----YTEDPHSKVKIHIQHGTTTLAFKFKHGIIVAVDSRATGGSYIASGTVKKVIEINPYLLGTMAGGAADCSFWERELARRCRIYELRNKERISVAAASKLLANMVYGYKNMGLSMGTMITGWDKRGPELYYVDSDGTRLHGDMFSVGSGSTYAYGVLDAGFRYDMTPEEACELGRRSIYHATHRDAYSGGFVNVYHVREEGWVKISSTDVNQLHYGYK 300          
The following BLAST results are available for this feature:
BLAST of NO21G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22648.11.100e-14288.85proteasome subunit beta type 5 [Nannochloropsis ga... [more]
CBN74512.12.600e-10772.49conserved unknown protein [Ectocarpus siliculosus][more]
XP_002179855.11.200e-9666.79predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK48257.16.000e-9675.22hypothetical protein THAOC_32963 [Thalassiosira oc... [more]
OEU13062.16.000e-9665.57LMP7-like protein [Fragilariopsis cylindrus CCMP11... [more]
GAX24332.18.700e-9564.0620S proteasome subunit beta 5 [Fistulifera solaris... [more]
XP_009038619.15.600e-9465.52hypothetical protein AURANDRAFT_28593 [Aureococcus... [more]
GAX26048.15.600e-9463.3520S proteasome subunit beta 5 [Fistulifera solaris... [more]
AAM18885.12.400e-9271.31unknown [Branchiostoma floridae][more]
XP_004347536.22.400e-9272.46hypothetical protein CAOG_04785 [Capsaspora owczar... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL025nonsL025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR060ngnoR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004623NSK004623Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01470.1NO21G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559583gene_8106Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100023g26gene7782Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01470.1NO21G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01470 ID=NO21G01470|Name=NO21G01470|organism=Nannochloropsis oceanica|type=gene|length=1063bp
AACAGAACACAGGCAGAGAATCTCCTCCTATCTCCTCTACTTCTCCTCCC
CTACTATTTTCTACAATGCACGGCATTGGTACCGAGATTTTGGACCTGGG
CAAGTCCCTCAAGGCTGCGGCAGAGCCCGGGTCCGCCATGCCCCCTCAGG
CCAAGGCGGAAGAGGGTGGCTTTTTGCTGCCGGCAGTGGAGGACCCTGCT
GCATTCTGCAAGGCCAACTTTGGGGTGGGGTACGGCATAGACAATCACCA
AGAGCTCAAATTTGCGAAGGGTACAACCACCCTGGCTTTCAAATTTGATC
ATGGCATCATCGTTGCGGTGGATTCCCGGTCGACGCAAGGTGCTTATGTG
GCCTCGGGCACGGTCAAAAAGGTGATTGAGATCAACCCTTACTTGCTAGG
GACCATGGCGGGCGGCGCCGCGGACTGCTCTTTCTGGGAGCGGAACTTAG
GCATTCAGTGCCGGCTTTATGAGCTGCGTCACAAGGAGCGTATCTCTGTG
GCGGCTGCGAGCAAGCTGCTGGCTAACACGGTGATGCAATACCGAGGCTA
TGGGCTGTCAATGGGGACTATGATTACGGGGTGGGACAAGACCGGCCCCC
AGCTTTACTATGTCGACAACGACGGCATGCGCCTCAAGGGTGACCTCTTC
TCGGTGGGTTCTGGGTCAACCTATGCCTATGGTGTGTTAGACGCAAACTA
CCGCAAGGACTTGAGTGCAGAGGATGCGATTGAGTTGGGACGGCGCGCCA
TTTATCACGCCACCCACCGGGATGCGTACTCAGGAGGGGTCATCAATGTG
TACCACGTGCAGGAGCAGGGGTGGGTGAAGGTGTTTTCTGGTGACTGTGT
AGATCTGCATTACAAGTACCAAGAGGAGAAGGTCACAAGGATGGTTATGT
AAACAAATATCGAAGAGGAGGAGGGAGGGAGGCGGGGAGGGAGGCAGAAA
TGGCGTGATGGAACAAAAAGGAGAAAGTAGAGAATCCAGTAGGTTCCAGA
GCAAACGCGCTATTGGATGGACCAGGTAGGAAAGAAGGAAACATGAAAAT
GGTTAAGCGGCAA
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protein sequence of NO21G01470.1

>NO21G01470.1-protein ID=NO21G01470.1-protein|Name=NO21G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=279bp
MHGIGTEILDLGKSLKAAAEPGSAMPPQAKAEEGGFLLPAVEDPAAFCKA
NFGVGYGIDNHQELKFAKGTTTLAFKFDHGIIVAVDSRSTQGAYVASGTV
KKVIEINPYLLGTMAGGAADCSFWERNLGIQCRLYELRHKERISVAAASK
LLANTVMQYRGYGLSMGTMITGWDKTGPQLYYVDNDGMRLKGDLFSVGSG
STYAYGVLDANYRKDLSAEDAIELGRRAIYHATHRDAYSGGVINVYHVQE
QGWVKVFSGDCVDLHYKYQEEKVTRMVM*
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Synonyms
Publications