NO21G01270, NO21G01270 (gene) Nannochloropsis oceanica

Overview
NameNO21G01270
Unique NameNO21G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2276
Alignment locationchr21:386581..388856 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:386581..388856 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Homology
The following BLAST results are available for this feature:
BLAST of NO21G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01270.1NO21G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01270.1NO21G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01270 ID=NO21G01270|Name=NO21G01270|organism=Nannochloropsis oceanica|type=gene|length=2276bp
TGATGATTGGAACGGGGGGGATGGGGGCAGGAGGAGGAGGAAGAGGGGGA
GGAGGGGGAAGTGAGAGTAGCCCCTGTTTGCTGATTGCGAAGGAAGGGGG
CATCGAGCCGCTGGTGACATTGATGAGGAGTGGTGGGAGGGAGGGAGGGC
TTGGGCGGGAGCAGGGGCTGAAGGTGAGGGCTGCTACGATTAGATTGGTG
GCTATTCTGAGCCAGCACCCTGCGTGTCGGGTTGCTTTCTTTCAGACGCC
CTATCTGATTGACACCTTGTTCACCGTAGGGATCAATGCCCTGCGAGAAA
CCGAACGAAAGACCGACAACAACGACCAGCAGCAGCCACAACACCAGCGT
CTCCTCTGTGCCCCTTCGTCCCCCTCCTTCTCCACCTCAACCGAAACAGA
CGAACACGCCACTCACCTCGGCTCCCTCTCCTTCCGGGTCGCCACCTTGG
AAGCCGTCCACGTTGCCTTTGCCCTTGCCAACCTGGCTGCCATCGGGGAC
GGGTGCTACGAGCGTCGTCTTGTCGAACTAGGAGCTGCTCCTGTATTGCT
CCAGATGTGCAATTGCCCCATCCCTGAAGTCGTCGCTCAGGCCGTGAGGG
GCCTCGCGCAACTTTGTGGGCCGCTAACTCGGGGCTTTGTGAGGGTGGGA
GGATCGGATTGGGGAGGGAGGGGTAGAGGGAGTGGGGGGGAGAAAGGGCA
GGGGCTTCGGACGGTGGAAGACACGCAAGACGAGCAGTTGAGGTTGTTGT
GGTCCAATGAGATGCTTCAGGTGATGCTGAGCTTGATCCTTGCCAACAGT
AGTAGTAGTAGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAA
CAGTAATGGCAGTGATGATGCGGCAAAGCAGCAGCAGCATGTCGAGGCGG
TGCGGGCGATAGCGGCACTGGCGCGGGTAGTGGACTTCTCGTTCTTGATC
GTGCGACCTCAGGGAGGGGTGCTGAAGGAGCTCCTCAAACTTGCAGTGGA
CCCGTCCACCTCCCCAGTGGAAGGAGGAGGAAGGGGGGGAGGAGGGAGTG
AGAGGTTGAGGGGGCAGGAATTGAAGGTACTTGCGGAGGAGGCTTTGGTC
AACTTGGGTTTTGAGGGGGGATCGAGGGCTCTGGAGATATGTGGGAATGA
TCAGGGTTTGCTGCTGGACTGGTGGGTGATGGAAAGGGGCTTGGAGGACC
AGAAGGCAGCGAACGACGAGTTGCCATTTGCAGTGGAAGCCATGATGGCC
CTGGGTGGGGATGAGGGACGAGGGCGGGAGGGAGGAGGGAAGGGGAGGGA
GGGAGGGGGAAGAGCCGGATCGTCGGGGGGAGGATCGGTTGCCATGGTGG
CGGGGCAGCCTTATCAGCAGCAACAGCACCAGCAGTATGGGTATCTTCAG
CAGCAGCAGCAACAGCAGCAGCAGCAAAAGCAGGATGGGGGAGGAGAGGG
AGGAAGGAAGGGTACTGCAATGCTTTCACCGCCCGCGGGATTGGCGAGTA
TCGAGAGGAGGAGGGAGGGAGGAAGGGAGGGTGGGGGAGGATTGGGAGGG
TTTAGCGGACTCATCAAGGAGGTGGCAAATATGAGGCTGAGAGACCTTTT
GTTAATGTGTCTGACTCCGGCAGGGGGAGGAAGGGGGGGAGGGAGGAATG
GTGGCAGTAGTGGTGGTGATGGCGGGCAATCAGAAAGTGCACTCCATGGG
AGTAAGGCTCACCGCGGAGGGGGAGGAACGGAGGGAGGACATGAGGGAAG
GGCAGGAGGACCACCGGGTGAATATGGACAAGAGTGTAAAACCTCCTCTC
TCTCCTGCTCTACCTCTTCTCCCTCTTCTACCTCTTCTACCTACTCCTCC
TCCTCCTCGATCCCTGTTGCTCTCCAACCGCCTCAATTCCGTGGTGCGTC
GACTTTCGGTGGCTTTATCAACAGTGTAGCTAGTGTCACAGGAGGGGGGA
GGGAGGCAGGGAGGGAGGCAGGGCTGGGTTGTAGCAGTGGAGGGAGGAGG
GAGACGTTGCTAAGCTGTTTGCTGAACTCACGGAGGCAGCCGCTGGTGGA
TGATGCCATGGACGAGCAGGAGAGAAGGTGGGCCCATTATCCCTGGCCTT
CGGTATGCTCACCGCTGGCCTTACCCGAGGTGGGGAGTTTGAGCTTTAAC
TTACAGAGATTCATGGACCGAGGCTTCCCTAGCCGGTTGACGCAGTTTGA
AGTGGTACCTCTGACGATGTTGGGGCTCACAAGGGGGGTAGGAAGGAAGG
GTGGGAGGGGGGGTTGGAGTTTGTGA
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protein sequence of NO21G01270.1

>NO21G01270.1-protein ID=NO21G01270.1-protein|Name=NO21G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=758bp
MIGTGGMGAGGGGRGGGGGSESSPCLLIAKEGGIEPLVTLMRSGGREGGL
GREQGLKVRAATIRLVAILSQHPACRVAFFQTPYLIDTLFTVGINALRET
ERKTDNNDQQQPQHQRLLCAPSSPSFSTSTETDEHATHLGSLSFRVATLE
AVHVAFALANLAAIGDGCYERRLVELGAAPVLLQMCNCPIPEVVAQAVRG
LAQLCGPLTRGFVRVGGSDWGGRGRGSGGEKGQGLRTVEDTQDEQLRLLW
SNEMLQVMLSLILANSSSSSSSSSSSSSSSSNNSNGSDDAAKQQQHVEAV
RAIAALARVVDFSFLIVRPQGGVLKELLKLAVDPSTSPVEGGGRGGGGSE
RLRGQELKVLAEEALVNLGFEGGSRALEICGNDQGLLLDWWVMERGLEDQ
KAANDELPFAVEAMMALGGDEGRGREGGGKGREGGGRAGSSGGGSVAMVA
GQPYQQQQHQQYGYLQQQQQQQQQQKQDGGGEGGRKGTAMLSPPAGLASI
ERRREGGREGGGGLGGFSGLIKEVANMRLRDLLLMCLTPAGGGRGGGRNG
GSSGGDGGQSESALHGSKAHRGGGGTEGGHEGRAGGPPGEYGQECKTSSL
SCSTSSPSSTSSTYSSSSSIPVALQPPQFRGASTFGGFINSVASVTGGGR
EAGREAGLGCSSGGRRETLLSCLLNSRRQPLVDDAMDEQERRWAHYPWPS
VCSPLALPEVGSLSFNLQRFMDRGFPSRLTQFEVVPLTMLGLTRGVGRKG
GRGGWSL*
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Synonyms
Publications