NO20G01540, NO20G01540 (gene) Nannochloropsis oceanica

Overview
NameNO20G01540
Unique NameNO20G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length957
Alignment locationchr20:476548..477504 +

Link to JBrowse

Properties
Property NameValue
Descriptionglyoxylate reductase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:476548..477504 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0004616phosphogluconate dehydrogenase (decarboxylating) activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR0089276-PGluconate_DH_C-like
IPR029154NADP-bd
IPR0061156PGDH_NADP-bd
Homology
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: EWM22096.1 (2-hydroxy-3-oxopropionate reductase [Nannochloropsis gaditana])

HSP 1 Score: 494.2 bits (1271), Expect = 3.000e-136
Identity = 250/313 (79.87%), Postives = 273/313 (87.22%), Query Frame = 0 
Query:    1 MATSSDTEICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACMPPQVVKGEASNDKAVNG 314
            M ++ D  +CGFIGLGLMG+GMA NLL KR+HHLIIWNRDT K+ DLA  FPGRVTVA TPKEVV+TAQVTFSMLSTLEAS AVFEGP+G+LAG GP+T+IVDCATLTPERMAEMA  VE KG IFLEAPVSGSK PAEQGTLIFMCAG+K LYERV+EDLDAMGKA+YFLG VGAASRMKIVVNMTMGGMLACF+EGLGLAKAADLPL DLL ILDGGAC+CPMF+LKGP ML+R YD AFPLKHAQKDMRFAVELGDKLAQPLPV+AAANEVYKRAR+ GH+D DFSAVAE  +          +DK VNG
Sbjct:    1 MTSTIDAGVCGFIGLGLMGMGMAKNLLKKRQHHLIIWNRDTGKAQDLATAFPGRVTVAHTPKEVVSTAQVTFSMLSTLEASAAVFEGPDGVLAGTGPSTAIVDCATLTPERMAEMATQVEEKGAIFLEAPVSGSKGPAEQGTLIFMCAGDKALYERVAEDLDAMGKARYFLGAVGAASRMKIVVNMTMGGMLACFSEGLGLAKAADLPLEDLLEILDGGACACPMFKLKGPHMLRRSYDAAFPLKHAQKDMRFAVELGDKLAQPLPVSAAANEVYKRARQQGHEDDDFSAVAEVTV---------HHDKQVNG 304
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: CBJ48294.1 (2-hydroxy-3-oxopropionate reductase [Ectocarpus siliculosus])

HSP 1 Score: 297.7 bits (761), Expect = 4.200e-77
Identity = 162/291 (55.67%), Postives = 203/291 (69.76%), Query Frame = 0 
Query:    8 EICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLD----AMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEA 295
            E  GFIGLG+MG GMA+NL  K    +++WNR   K     AE  G  + A++PKEVV + ++T+ MLS LEAS +V+EG +G+LAGV     +VDCATLTPE M  ++  V+ KGG+FLEAPVSGSK  A  GTLIF+C G++ L+ RV E ++     MGKA ++LG VG  S+MK+VVNMTMG M+    EG+ LA+AADLP   LL +LD GA S PMF++KG  +L  K+D AFPLKHAQKDMRFAV LGD L  PLPVA+AANE +KRAR   H D DF AV  A
Sbjct:    3 ETVGFIGLGIMGQGMASNLA-KAGAKVVVWNRSEGKRSAFVAEHEG-CSAAASPKEVVESCELTYLMLSDLEASKSVYEGEDGVLAGVSEGKCLVDCATLTPEHMTSLSERVQAKGGVFLEAPVSGSKGQAAGGTLIFLCGGDEALFNRVKESMEGDGVTMGKAAHYLGAVGTGSKMKLVVNMTMGTMMNSLTEGIALAQAADLPADKLLTVLDQGAMSNPMFRMKGQFILDGKFDPAFPLKHAQKDMRFAVALGDCLGLPLPVASAANEQFKRARPE-HGDEDFCAVFAA 290
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: XP_001698018.1 (predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 279.6 bits (714), Expect = 1.200e-71
Identity = 155/300 (51.67%), Postives = 195/300 (65.00%), Query Frame = 0 
Query:   11 GFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACMPPQVVKGEASNDKA 311
            GFIG+G+MGL M  NLL K  + +++WNR+  K   LAAE      VASTP+EV A A  TF+MLS  EA+  V   P+G+ AG+ P    VD +T+       +AA V  +GG FLEAPVSGSK PAEQG LIF+ AG++ L+  VS  LDAMGKAK+FLG  GA + MK+VVNM MG M+  FAEGL LA    L   D++ ++  GA + PMF LKGP M  R Y  AFPLKH QKDMR A+ LGD++ QPLP+AAA+N  Y  ARR G  D DFSAV EA +     +   +++KA
Sbjct:    6 GFIGIGIMGLAMTRNLL-KAGYQVVVWNRNPDKCAALAAE---GAKVASTPQEVAAAATYTFAMLSDPEAALDVANRPDGVAAGMAPGKGYVDVSTVDAATSQAVAAAVRARGGAFLEAPVSGSKGPAEQGKLIFLTAGDQALFNAVSGPLDAMGKAKFFLGAEGAGANMKLVVNMVMGSMMTAFAEGLALADKVGLRQQDVIDVVGLGAIAAPMFALKGPAMAARAYAPAFPLKHQQKDMRLALALGDEVGQPLPLAAASNAQYIAARRQGLGDADFSAVMEAVLGQAAAEATEAHNKA 301
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: PNW82258.1 (hypothetical protein CHLRE_06g278148v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 279.6 bits (714), Expect = 1.200e-71
Identity = 155/300 (51.67%), Postives = 195/300 (65.00%), Query Frame = 0 
Query:   11 GFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACMPPQVVKGEASNDKA 311
            GFIG+G+MGL M  NLL K  + +++WNR+  K   LAAE      VASTP+EV A A  TF+MLS  EA+  V   P+G+ AG+ P    VD +T+       +AA V  +GG FLEAPVSGSK PAEQG LIF+ AG++ L+  VS  LDAMGKAK+FLG  GA + MK+VVNM MG M+  FAEGL LA    L   D++ ++  GA + PMF LKGP M  R Y  AFPLKH QKDMR A+ LGD++ QPLP+AAA+N  Y  ARR G  D DFSAV EA +     +   +++KA
Sbjct:   89 GFIGIGIMGLAMTRNLL-KAGYQVVVWNRNPDKCAALAAE---GAKVASTPQEVAAAATYTFAMLSDPEAALDVANRPDGVAAGMAPGKGYVDVSTVDAATSQAVAAAVRARGGAFLEAPVSGSKGPAEQGKLIFLTAGDQALFNAVSGPLDAMGKAKFFLGAEGAGANMKLVVNMVMGSMMTAFAEGLALADKVGLRQQDVIDVVGLGAIAAPMFALKGPAMAARAYAPAFPLKHQQKDMRLALALGDEVGQPLPLAAASNAQYIAARRQGLGDADFSAVMEAVLGQAAAEATEAHNKA 384
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: EWM23107.1 (2-hydroxy-3-oxopropionate reductase [Nannochloropsis gaditana])

HSP 1 Score: 276.9 bits (707), Expect = 7.600e-71
Identity = 154/297 (51.85%), Postives = 199/297 (67.00%), Query Frame = 0 
Query:    2 ATSSDTEICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPG-RVTVASTPKEVVATA-QVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACM 297
            ++S   +  GF+GLG MG GM   LL +R   +I+WNR   KS  L AE+P  RVT+ASTP++V+  A  +TFSMLST EA+ AVFEGP+G+LAGVGP T++VDCATL  + M    A V  KGG FLEAPVSGSK PAEQG L+F+ AG++ L++     L+AMGKA  FLGT G  + MK+VVNM M  M+   AEGL LA  A +   +++ +L  GA + PMF LKGPK+LQ  +   FPLKHAQKD+ FA+ L  +L   +P A AA+E Y++A   G  + DFSAVA   M
Sbjct:   64 SSSPQNQKVGFVGLGYMGAGMVRRLL-ERGDDVIVWNRSLRKSEALLAEYPAPRVTIASTPRQVLEEAGLMTFSMLSTPEAAHAVFEGPDGVLAGVGPGTNLVDCATLEVKDMQSFDAAVREKGGRFLEAPVSGSKVPAEQGQLVFLTAGDQELFQLAQPYLEAMGKANVFLGTTGKGTEMKLVVNMVMATMMTSLAEGLNLAGKAGIDPAEVVKVLGLGAMANPMFALKGPKILQDDHTPNFPLKHAQKDLAFALTLAGQLGARVPTAQAADEEYRKALAAGEGERDFSAVAHRLM 359
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: XP_005855941.1 (3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU20414.1 3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 276.2 bits (705), Expect = 1.300e-70
Identity = 153/297 (51.52%), Postives = 199/297 (67.00%), Query Frame = 0 
Query:    2 ATSSDTEICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPG-RVTVASTPKEVVATA-QVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACM 297
            ++S   +  GF+GLG MG GM   LL +R   +I+WNR   KS  L AE+P  RVT+ASTP++V+  A  +TFSMLST EA+ AVFEGP+G+LAGVGP T++VDCATL  + M    A V  KGG FLEAPVSGSK PAEQG L+F+ AG++ L++     L+AMGKA  FLGT G  + MK+VVNM M  M+   AEGL LA  A +   +++ +L  GA + PMF LKGPK++Q  +   FPLKHAQKD+ FA+ L  +L   +P A AA+E Y++A   G  + DFSAVA   M
Sbjct:   40 SSSPQNQKVGFVGLGYMGAGMVRRLL-ERGDDVIVWNRSLRKSEALLAEYPAPRVTIASTPRQVLEEAGLMTFSMLSTPEAAHAVFEGPDGVLAGVGPGTNLVDCATLEVKDMQSFDAAVREKGGRFLEAPVSGSKVPAEQGQLVFLTAGDQELFQLAQPYLEAMGKANVFLGTTGKGTEMKLVVNMVMATMMTSLAEGLNLAGKAGIDPAEVVKVLGLGAMANPMFALKGPKIIQDDHTPNFPLKHAQKDLAFALTLAGQLGARVPTAQAADEEYRKALAAGEGERDFSAVAHRLM 335
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: CBJ30588.1 (gamma hydroxybutyrate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 270.4 bits (690), Expect = 7.100e-69
Identity = 155/297 (52.19%), Postives = 197/297 (66.33%), Query Frame = 0 
Query:    1 MATSSDTEICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRV--TVASTPKEVVATAQVTFSMLSTLEASTAVFEGP-EGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEA 295
            ++  ++ E  GFIGLG+MG GMA+NL+ K    +I+WNR  SK    AA+F  R     A+TPKEVV    +T+SMLST EA++ VF  P +G+LAG+     +VDCATL  E M +M +   G+G  FLEAPVSGSK PA  G L+F+C G++ L+ER SEDLD MGKA ++LG  G  + MK+VVNM M  ML   AEG+ L  +  L    L+ IL  GA + PM  LKGP M ++ Y + FPLKHAQKDMRFA+ LGDK AQ LPVAAAAN  Y RA+++ H D DF AV EA
Sbjct:   45 LSMEAEREKVGFIGLGIMGTGMASNLI-KGGRDVIVWNRTASK----AADFSKRTGCETAATPKEVVEQCSITYSMLSTPEAASEVFFDPHDGVLAGLSKGKCLVDCATLQVEDMQDMYSEAIGRGAKFLEAPVSGSKGPAAAGQLVFLCGGDEDLFERASEDLDLMGKASHYLGPAGKGTEMKLVVNMIMSTMLVSVAEGMCLGDSLGLSSDSLIEILGQGAMASPMVALKGPLMAKKDYSSNFPLKHAQKDMRFALGLGDKAAQALPVAAAANAEYLRAKKN-HADDDFCAVVEA 335
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: PRW60273.1 (glyoxylate succinic semialdehyde reductase chloroplastic [Chlorella sorokiniana])

HSP 1 Score: 270.4 bits (690), Expect = 7.100e-69
Identity = 146/284 (51.41%), Postives = 190/284 (66.90%), Query Frame = 0 
Query:   11 GFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEA 295
            GF+G+G+MG  MA NL+ K  + + +WNR   K   L A       +A TP EVV++  +T +MLS  EA  AV  GP+G+ + +      VD +T+      E+AA V G GG +LEAPVSGSK PAEQG LIF+ AG++ L++  S  L+ MGKA ++LG VGA + MK+VVNM MG M+  +AEGL LAK A L   DL+ ++  GA +CPMF LKGP M++ KY  AFPLKH QKDMR A+ LGD+ AQ LP+AAAANE+YKRAR  G+ D DFSAV +A
Sbjct:   12 GFLGIGIMGNAMAANLI-KDGYDVTVWNRSADKCAALQA---AGAKLAGTPAEVVSSCDITLAMLSDPEACLAVAMGPDGVASAMKAGKGYVDVSTVDAATAQEVAAAVRGAGGAYLEAPVSGSKGPAEQGQLIFLSAGDRQLFDAASPLLEVMGKASFYLGEVGAGANMKLVVNMIMGSMMVSYAEGLNLAKQAGLQQADLVEVIKLGAIACPMFALKGPSMIEGKYPPAFPLKHQQKDMRLALALGDEHAQQLPLAAAANELYKRARAAGYSDADFSAVMDA 291
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: XP_002946110.1 (6-phosphogluconate dehydrogenase [Volvox carteri f. nagariensis] >EFJ53105.1 6-phosphogluconate dehydrogenase [Volvox carteri f. nagariensis])

HSP 1 Score: 269.2 bits (687), Expect = 1.600e-68
Identity = 147/286 (51.40%), Postives = 190/286 (66.43%), Query Frame = 0 
Query:    9 ICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEA 295
            + GF+G+G+MGL M  NL+ K  + +++WNR+  K   L  E      VAS+P++VV+ A  TF+MLS  EA+  V   P+G++AG+ P    +D +T+       +AA V   GG FLEAPVSGSK PAEQG LIF+ AG++ L+  VS  LD MGKAK+FLG  GA + MK+VVNM MG M+  FAEGL LA    L   D++ ++  GA + PMF LKGP M  R Y+ AFPLKH QKDMR A+ LGD++AQPLP+AAAAN +Y  ARR G  D DFSAV EA
Sbjct:   16 VLGFVGIGIMGLAMTRNLI-KAGYEVVVWNRNPEKCKPLEQE---GARVASSPRDVVSAATYTFAMLSDPEAALDVALRPDGVVAGISPGKGYIDVSTVDAATSRTIAAAVRSAGGGFLEAPVSGSKGPAEQGKLIFLTAGDEDLFAAVSAPLDVMGKAKFFLGPEGAGAHMKLVVNMVMGAMMTSFAEGLALADKVGLKHQDVIDVVALGAIAAPMFALKGPAMAARSYNPAFPLKHQQKDMRLALALGDEVAQPLPMAAAANSLYIAARRQGLGDMDFSAVMEA 297
[Close]
BLAST of NO20G01540 vs. NCBI_GenBank
Match: PNH09751.1 (putative oxidoreductase GLYR1 [Tetrabaena socialis])

HSP 1 Score: 268.1 bits (684), Expect = 3.500e-68
Identity = 149/297 (50.17%), Postives = 191/297 (64.31%), Query Frame = 0 
Query:    9 ICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAEFPGRVTVASTPKEVVATAQVTFSMLSTLEASTAV-FEGPEGMLAGVGPTTSIVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGNKVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLGLAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKDMRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACMPPQVVKGE 305
            + GF+G+G+MG+ M  NL+ K  + +++WNR+  K   LA E      VA++P+E VA A  TF+MLS  EA+  V     +G +AG+ P    VD +T+       +A+ V   G  FLEAPVSGSK PAEQG LIF+ AG++ L+  VS  LDAMGKAK+FLG  GA + MK+VVNM MG M+A FAEGL LA    L   D++ ++  GA + PMF LKGP M +R Y  AFPLKH QKDMR A+ LGD++AQPLP AAAAN +Y  ARR G  D DFSAV EA    Q   G+
Sbjct:   84 VLGFLGIGIMGVAMTRNLI-KAGYQVVVWNRNPDKCKALAEE---GAQVAASPREAVAAATYTFAMLSDPEAALHVALRAGDGAVAGLAPGKGYVDVSTVDAATSRTIASAVRAAGAAFLEAPVSGSKGPAEQGKLIFLTAGDEALFTAVSAPLDAMGKAKFFLGAEGAGANMKLVVNMVMGAMMASFAEGLALADKVGLRQQDVIDVIGLGAIAAPMFALKGPAMAKRAYAPAFPLKHQQKDMRLALALGDEVAQPLPTAAAANALYVAARRQGLGDSDFSAVLEAVAEQQAAAGQ 376
The following BLAST results are available for this feature:
BLAST of NO20G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22096.13.000e-13679.872-hydroxy-3-oxopropionate reductase [Nannochlorops... [more]
CBJ48294.14.200e-7755.672-hydroxy-3-oxopropionate reductase [Ectocarpus si... [more]
XP_001698018.11.200e-7151.67predicted protein, partial [Chlamydomonas reinhard... [more]
PNW82258.11.200e-7151.67hypothetical protein CHLRE_06g278148v5 [Chlamydomo... [more]
EWM23107.17.600e-7151.852-hydroxy-3-oxopropionate reductase [Nannochlorops... [more]
XP_005855941.11.300e-7051.523-hydroxyisobutyrate dehydrogenase [Nannochloropsi... [more]
CBJ30588.17.100e-6952.19gamma hydroxybutyrate dehydrogenase [Ectocarpus si... [more]
PRW60273.17.100e-6951.41glyoxylate succinic semialdehyde reductase chlorop... [more]
XP_002946110.11.600e-6851.406-phosphogluconate dehydrogenase [Volvox carteri f... [more]
PNH09751.13.500e-6850.17putative oxidoreductase GLYR1 [Tetrabaena socialis... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL023nonsL023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002686NSK002686Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01540.1NO20G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594770gene_6370Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100039g13gene8353Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01540.1NO20G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01540 ID=NO20G01540|Name=NO20G01540|organism=Nannochloropsis oceanica|type=gene|length=957bp
ATGGCGACCAGCTCTGACACAGAGATATGCGGCTTTATCGGTCTTGGTCT
CATGGGATTAGGGATGGCCAACAATCTGCTGAACAAACGAAAGCACCACC
TGATCATCTGGAACCGCGACACCAGCAAATCCGTCGACCTCGCCGCCGAA
TTCCCCGGCCGGGTCACCGTGGCGAGCACCCCCAAAGAAGTTGTGGCCAC
AGCACAAGTTACTTTTTCGATGCTCTCCACGCTGGAGGCCTCAACAGCTG
TTTTTGAGGGCCCGGAAGGAATGTTGGCGGGCGTAGGCCCGACTACTTCT
ATTGTTGATTGCGCGACGCTGACCCCGGAACGAATGGCCGAGATGGCGGC
GCTTGTGGAGGGAAAAGGCGGAATTTTCCTAGAGGCACCGGTATCGGGGA
GCAAGGCGCCGGCTGAACAGGGGACATTGATTTTTATGTGTGCAGGAAAT
AAAGTGTTGTATGAGCGAGTTAGTGAGGATTTGGATGCCATGGGCAAGGC
AAAATACTTTTTGGGAACAGTGGGGGCGGCCAGCAGGATGAAGATTGTGG
TTAATATGACCATGGGGGGGATGTTGGCGTGCTTTGCAGAGGGATTGGGG
CTGGCGAAGGCGGCAGATTTGCCCCTGGGCGATTTATTGGCTATTTTGGA
TGGCGGGGCATGTTCTTGTCCCATGTTCCAGTTGAAGGGACCGAAGATGT
TGCAAAGGAAGTATGACACGGCTTTTCCTCTCAAGCATGCCCAAAAAGAC
ATGCGGTTTGCGGTTGAGTTGGGAGATAAGCTCGCGCAGCCGTTGCCGGT
GGCGGCGGCGGCGAATGAGGTGTACAAGCGGGCGCGGAGGCATGGGCATG
ATGATCACGACTTTAGTGCTGTGGCTGAGGCTTGTATGCCGCCGCAAGTG
GTGAAGGGGGAGGCAAGCAATGATAAGGCGGTAAATGGGAAGAGCGAGCG
ACCATAA
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protein sequence of NO20G01540.1

>NO20G01540.1-protein ID=NO20G01540.1-protein|Name=NO20G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=319bp
MATSSDTEICGFIGLGLMGLGMANNLLNKRKHHLIIWNRDTSKSVDLAAE
FPGRVTVASTPKEVVATAQVTFSMLSTLEASTAVFEGPEGMLAGVGPTTS
IVDCATLTPERMAEMAALVEGKGGIFLEAPVSGSKAPAEQGTLIFMCAGN
KVLYERVSEDLDAMGKAKYFLGTVGAASRMKIVVNMTMGGMLACFAEGLG
LAKAADLPLGDLLAILDGGACSCPMFQLKGPKMLQRKYDTAFPLKHAQKD
MRFAVELGDKLAQPLPVAAAANEVYKRARRHGHDDHDFSAVAEACMPPQV
VKGEASNDKAVNGKSERP*
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Synonyms
Publications