NO19G01980, NO19G01980 (gene) Nannochloropsis oceanica

Overview
NameNO19G01980
Unique NameNO19G01980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1107
Alignment locationchr19:578035..579141 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:578035..579141 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036464Rubisco_LSMT_subst-bd_sf
IPR001214SET_dom
Homology
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_008867988.1 (hypothetical protein H310_05128 [Aphanomyces invadans] >ETW03759.1 hypothetical protein H310_05128 [Aphanomyces invadans])

HSP 1 Score: 156.4 bits (394), Expect = 1.700e-34
Identity = 115/329 (34.95%), Postives = 167/329 (50.76%), Query Frame = 0 
Query:    4 SSKLREDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPLMVGDTYLSSCEW--------WSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVK-----DRALARLALRSPFALTRQPPVLSPSLLAAIRIQCAKGSEMAC----LENALKGPLSAANERETLAALEMALTIMREALPVAREEKE 316
            S  LREDD L+  L+YE F  P    SKW  H+++LP     N +  +   +  L+GS ++ +A + ++QV+SDF EL  + L+     L   E         ++ +NY+WAL+ I SRFVSVA +  +   K+M P FD+FNH     + +SH F                 D    + V+ + +    G + C+NYG L N +LL LYGFVLP N FD +++WA M   AP ++ K        LA  A  +PF L   P  L+  LLA +RIQ     E++     + N    P+   NE++TL AL  AL  M EA P+  E+ E
Sbjct:   73 SLPLREDDCLAWFLIYERFVNPQ---SKWKRHLDVLPHS-FHNILYFTEDEINMLQGSNVYYVALQLKQQVVSDFAELQQT-LLPDTLRLLHAEHSADVLMAVFTLENYKWALSVIWSRFVSVALDAEDNLAKSMVPVFDMFNHD--PHAQMSHGF-----------------DPTTNAFVLRSHQHWTAGSQVCINYGALPNHKLLTLYGFVLPSNPFDVVELWAPMSDDAPYYNRKLALMTGHGLADHATAAPFEL--YPDSLNDELLAYLRIQRLDVGELSSDLIEVANFAFEPVHDDNEKDTLTALIYALQQMLEAFPITVEDDE 375
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_008867989.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW03760.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 156.4 bits (394), Expect = 1.700e-34
Identity = 115/329 (34.95%), Postives = 167/329 (50.76%), Query Frame = 0 
Query:    4 SSKLREDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPLMVGDTYLSSCEW--------WSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVK-----DRALARLALRSPFALTRQPPVLSPSLLAAIRIQCAKGSEMAC----LENALKGPLSAANERETLAALEMALTIMREALPVAREEKE 316
            S  LREDD L+  L+YE F  P    SKW  H+++LP     N +  +   +  L+GS ++ +A + ++QV+SDF EL  + L+     L   E         ++ +NY+WAL+ I SRFVSVA +  +   K+M P FD+FNH     + +SH F                 D    + V+ + +    G + C+NYG L N +LL LYGFVLP N FD +++WA M   AP ++ K        LA  A  +PF L   P  L+  LLA +RIQ     E++     + N    P+   NE++TL AL  AL  M EA P+  E+ E
Sbjct:   11 SLPLREDDCLAWFLIYERFVNPQ---SKWKRHLDVLPHS-FHNILYFTEDEINMLQGSNVYYVALQLKQQVVSDFAELQQT-LLPDTLRLLHAEHSADVLMAVFTLENYKWALSVIWSRFVSVALDAEDNLAKSMVPVFDMFNHD--PHAQMSHGF-----------------DPTTNAFVLRSHQHWTAGSQVCINYGALPNHKLLTLYGFVLPSNPFDVVELWAPMSDDAPYYNRKLALMTGHGLADHATAAPFEL--YPDSLNDELLAYLRIQRLDVGELSSDLIEVANFAFEPVHDDNEKDTLTALIYALQQMLEAFPITVEDDE 313
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: OQS00279.1 (hypothetical protein THRCLA_06065 [Thraustotheca clavata])

HSP 1 Score: 156.0 bits (393), Expect = 2.300e-34
Identity = 116/321 (36.14%), Postives = 164/321 (51.09%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPL------MVGDTYLSS-CEWWSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVKDRALARLAL----RSPFALTRQPPVLSPSLLAAIRIQCAKGSEMACLENA--LKGPLSAANERETLAALEMALTIMREALPVAREEKE 316
            REDD L+  L+YE F  P    SKW  HI +LP     N +  S   +E L+GS ++ +A + Q+QV SDFEEL  + L      +VGD    +  E ++ +NY+WAL+ I SRFVSVAT   +   K M P FD+FNH+    + ++H F                 +      V+ + +    G +  +NYG L N +LL LYGFVLP+N +D +++WA M P AP +  K        L    R PF LT     ++  LLA +RIQ  +  +++  E +     PL   NE+ TL AL  AL  M E  P + EE E
Sbjct:   77 REDDCLAWFLIYETFLNPK---SKWDRHIAVLPK-TFHNILYFSQKEIEELQGSNVYYVALQLQQQVTSDFEELKVNILPETLRSLVGDHSADAVLEAYTIENYKWALSVIWSRFVSVATS-SDTMVKCMVPVFDMFNHNPT--AQMAHGF-----------------NPRSNCFVLQSHQYWEAGSQVFINYGALPNHKLLTLYGFVLPENPYDCVELWAPMSPDAPYYKRKMSFFESHGLGHHSRVPFELTTLG--INEDLLAYLRIQRMEVEDLSSFEGSSFAYQPLGDENEKSTLTALIFALQQMLERFPTSIEEDE 371
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_012194140.1 (hypothetical protein SPRG_00522 [Saprolegnia parasitica CBS 223.65] >KDO34458.1 hypothetical protein SPRG_00522 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 149.1 bits (375), Expect = 2.800e-32
Identity = 125/361 (34.63%), Postives = 180/361 (49.86%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPL----------MVGDTYLSSCEWWSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSA-ISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVKDRALARLAL----RSPFALTRQPPVLSPSLLAAIRIQCAKGSEMACLENALKG--PLSAANERETLAALEMALTIMREALPVAREEKEWGEEELQERGGEENVEAQLVRTYLESERALLTQGLE 352
            REDD L+  LLYE         SKWA HI +LP     N + LS   +E LEGS ++ +A   Q QV +DF+EL+ + L             D  LS+   ++ +NY+WAL+ I SRFVSVAT   +   K M P FD+FNH    PSA ++H F                 D    S V+ + +    G +  +NYG L N +LL LYGFVL  N +D +++WA M   AP +  K   +    L    R PF LT     ++  LLA +RIQ  +  E++  E +      LS  NE+ TL AL  AL  MR+  P + E+    ++ L +   E +   ++V     S++A+LTQ ++
Sbjct:   79 REDDCLAWFLLYETH---LNKASKWARHIAVLPR-TFHNILYLSDADIERLEGSNVYYVARHLQSQVAADFDELTTTILPETLRALAADHPADAILSA---FTLENYKWALSVIWSRFVSVATST-DSMVKCMVPVFDMFNHD---PSAQMAHGF-----------------DPRTNSFVLQSHQYWAPGAQVFINYGALPNHKLLTLYGFVLEKNAYDTVELWAPMSHDAPYYDRKMAFITAHGLAHHARVPFDLTTLG--VNEELLAYLRIQRMEVDELSSFEGSTFAYKALSNENEKSTLTALIFALQSMRDRFPTSIED----DDALLKTLSEADAHTRMVVLLRRSDKAILTQHID 405
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_008611801.1 (hypothetical protein SDRG_07727 [Saprolegnia diclina VS20] >EQC34929.1 hypothetical protein SDRG_07727 [Saprolegnia diclina VS20])

HSP 1 Score: 147.1 bits (370), Expect = 1.100e-31
Identity = 124/361 (34.35%), Postives = 178/361 (49.31%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPL----------MVGDTYLSSCEWWSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSA-ISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVKDRALARLAL----RSPFALTRQPPVLSPSLLAAIRIQCAKGSEMACLENALKG--PLSAANERETLAALEMALTIMREALPVAREEKEWGEEELQERGGEENVEAQLVRTYLESERALLTQGLE 352
            REDD L+  LLYE         SKW  HI +LP     N + LS   +E LEGS ++ +A   Q QV +DF+EL+ + L             D  L++   ++ +NY+WAL+ I SRFVSVAT   +   K M P FD+FNH    PSA ++H F                 D    S V+ + +    G +  +NYG L N +LL LYGFVL  N +D +++WA M   AP +  K   +    L    R PF LT     ++  LLA +RIQ  +  E++  E +      LS  NE+ TL AL  AL  MR+  P + EE +   + L     E +   ++V     S++A+LTQ ++
Sbjct:   79 REDDCLAWFLLYETH---LNKASKWMRHIAVLPR-TFHNILYLSDADIERLEGSNVYYVARHLQSQVAADFDELTTTILPETLRALAADHSADAILAA---FTLENYKWALSVIWSRFVSVATST-DSMVKCMVPVFDMFNHD---PSAQMAHGF-----------------DPRTNSFVLQSHQYWAPGGQVFINYGALPNHKLLTLYGFVLEKNAYDTVELWAPMSQDAPYYDRKMAFITAHGLGHHARVPFDLTTLG--VNEELLAYLRIQRMEVDELSSFEGSTFAYKALSNENEKSTLTALIFALQSMRDRFPTSIEEDDMLMKTLS--ASEADAHTRMVVLLRRSDKAILTQHID 407
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: OQR89500.1 (hypothetical protein ACHHYP_06253 [Achlya hypogyna])

HSP 1 Score: 145.2 bits (365), Expect = 4.000e-31
Identity = 122/358 (34.08%), Postives = 181/358 (50.56%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPL-----MVGDTYLSSC--EWWSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSA-ISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVKDRALARLAL----RSPFALTRQPPVLSPSLLAAIRIQCAKGSEMACLENA--LKGPLSAANERETLAALEMALTIMREALPVAREEKEWGEEELQERGGEENVEAQLVRTYLESERALLTQGLE 352
            REDD L+  L+YE F  P+   SKWA H+++LP     N +  +   +  L+GS ++ +A + Q+QV+SDF+EL  + L      + D + S      ++ +NY+WAL+ I SRFVSVAT   +   K M P FD+FNH    PSA ++H F                 D    + V+ + +    G +  +NYG L N +LL LYGFVL  N +D +++WA M   AP ++ K   ++   L    R PF LT     ++  LLA +RIQ    +E++  E +     PLS  NE+ TL AL  AL  M    P + EE E         G       ++V T   S++ +LTQ +E
Sbjct:   75 REDDCLAWFLMYETFLNPN---SKWARHLQVLPKD-FHNILYFADDDIALLQGSNVYYVARQLQQQVVSDFDELKVTILPETLRALADDFSSDAILAAFTLENYKWALSVIWSRFVSVATST-DSMVKCMVPVFDMFNHD---PSAQMAHGF-----------------DPRTQAFVLQSHQYWAPGTQVFINYGALPNHKLLTLYGFVLAKNPYDTVELWAPMSEDAPYYARKMAFISAHGLAQHSRQPFDLTTLG--VNEELLAYLRIQRMDVAELSSFEGSSFAYEPLSDDNEKSTLTALIYALQQMLARYPTSIEEDE------ALLGQTPTEHERMVITLRLSDKKILTQHIE 399
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_009837871.1 (hypothetical protein H257_12392 [Aphanomyces astaci] >XP_009837872.1 hypothetical protein, variant [Aphanomyces astaci] >ETV72643.1 hypothetical protein H257_12392 [Aphanomyces astaci] >ETV72644.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 137.5 bits (345), Expect = 8.400e-29
Identity = 117/376 (31.12%), Postives = 176/376 (46.81%), Query Frame = 0 
Query:    4 SSKLREDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPLMVGDTYLSS-------CEWWSSKNYRWALAQIHSRFVSVATE--------PGEPPRKAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVK-----DRALARLALRSPFALTRQPPVLSPSLLAAIRIQCAKGSEMACLENALK----GPLSAANERETLAALEMALTIMREALPVAREE-------KEWGEEELQERGGEENVEAQLVRTYLESERALLTQ 349
            S  LREDD L+  L+YE F  P    SKW  H++++P     N +  +   +  L+GS ++ +A + ++QV SDF EL  + L      L +          ++ +NY+WAL+ I SRFVS+A                K+M P FD+FNH     + +SH F                 D    S V+ + +    G +  +NYG L N +LL LYGFVLP N FD +++WA M    P +  K        LA  A  +PF L      ++  LLA++RIQ    +E++  E+        P+   NE++TL AL  AL  M  A P A E+       ++ G++E QE G E +     +   +  +R L  Q
Sbjct:   73 SLPLREDDCLAWFLIYERFVNPQ---SKWKRHLDVMPQA-FHNILYFTEDEINMLQGSNVYYVALQLKQQVASDFGELQRTLLPTTLRLLHADHSADDLIRVFTIENYKWALSVIWSRFVSIAIHATAXXXXXXXXXXXKSMVPVFDMFNHDPF--AQMSHGF-----------------DPTTNSFVLRSHQHWPAGSQVYMNYGALPNHKLLTLYGFVLPSNPFDVVELWAPMHEDVPSYDRKLALLTAHGLAEHATSTPFDLYSDS--VNDELLASLRIQRLTDTELSQFESGTPHFAFEPIHDDNEKDTLTALIYALQQMLAAFPTAVEDDEAELAARQEGDDE-QETGDEASHHVMALHLRVSDKRILHAQ 422
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: POM58493.1 (Putative histone-lysine N-methyltransferase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 137.5 bits (345), Expect = 8.400e-29
Identity = 118/341 (34.60%), Postives = 166/341 (48.68%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPLM-------VGDTYLSSCEWWSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPEFSVKDRALARLAL---RSPFALTRQPPVLSPSLLAAIRIQ---CAKGSEMACL-ENALKGPL-SAANERETLAALEMALTIMREALPVAREEK----EWGEEELQERGGEEN 330
            REDD L+IALLYE F   S+  SKW+ HIE+LP     NA+ +    L+ LEGS L  +A + +++V  D+  L  S L+        G  +    E++S +NY+WAL+ I SRFV       +   KAM P FD+ NH     + +SH F                 D +     +V+ +    G +  +NYG L N +LL LYGFV+  N FDA+++W  MD  +  F  K++ L    L    +PF L       +  LL A RIQ   C    E   L   AL G + S  NE+E L+ L   L  M EA P + EE     E  E+ L ++G E +
Sbjct:   92 REDDQLAIALLYEKFVLGSK--SKWSKHIELLPQ-TYYNALYIEQEVLKLLEGSNLFFIAQQMEQKVALDYARLKESVLLELFENVTEGINFDLFDEYFSFENYKWALSTIWSRFVKSDAPVAKQSFKAMVPVFDMLNHD--PEAEMSHFF-----------------DMDTQRFKLVSHQHWNAGAQMFINYGALSNHKLLSLYGFVIIGNPFDAVEMWLPMDEGSAFFHEKEQLLLSNGLDHASNPFELVADE--TNDLLLMATRIQEINCETVEEFEALAHKALDGQMVSLENEQEALSRLIYTLEKMLEAFPTSIEEDDQLLESWEDNLAQQGDERS 408
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_009517748.1 (hypothetical protein PHYSODRAFT_553476 [Phytophthora sojae] >EGZ30473.1 hypothetical protein PHYSODRAFT_553476 [Phytophthora sojae])

HSP 1 Score: 136.0 bits (341), Expect = 2.400e-28
Identity = 123/359 (34.26%), Postives = 176/359 (49.03%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPLM-------VGDTYLSSCEWWSSKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPE-FSVKDRALARLAL---RSPFALTRQPPVLSPSLLAAIRIQ---CAKGSEMACLEN-ALKGP-LSAANERETLAALEMALTIMREALPVAREEKEWGEEELQERGGEENVEAQLVRTYLESERALLTQGL 351
            REDD L+IALLYE F R S+  SKWA HIE+LP     NA+   P  L  LEGS ++ +A + +E+V  D+  L  S L+        G       E++S +NY+WAL+ I SRF  V     +   KAM P FD+ NH     + +SH F                 D +     +V+ +    G +  +NYGPL N +LL LYGFV+  N FDA+++W  MD  + + F  K++ L    L    +PF L       +  LL A RIQ   C    E   L N AL+G  +S  NE+E L  L   L  M E+ P + EE +   E+  ++    N E   V     S++ +L++ +
Sbjct:   92 REDDQLAIALLYEKFVRGSK--SKWAKHIELLPR-TYHNALYFGPEELRALEGSNVYFIAQQMEEKVAHDYARLKESVLLELFENVPEGINVDLFDEFFSLENYKWALSTIWSRFGDVPV--AKQSFKAMVPVFDMLNHD--PEAEMSHFF-----------------DMSTQRFKLVSHQHWNAGAQMFINYGPLSNHKLLALYGFVIIGNPFDAVEMWLPMDEASTKFFQEKEQLLLTNGLDHATNPFELVADES--NDLLLMAARIQEIDCETVEEFEELANKALEGEMISLENEQEALTRLIYTLEKMLESFPTSIEEDDILLEQDDKKTDNLNHERMAV-AVRRSDKYILSENI 423
[Close]
BLAST of NO19G01980 vs. NCBI_GenBank
Match: XP_024575857.1 (N-methyltransferase [Plasmopara halstedii] >CEG39488.1 N-methyltransferase [Plasmopara halstedii])

HSP 1 Score: 136.0 bits (341), Expect = 2.400e-28
Identity = 126/381 (33.07%), Postives = 179/381 (46.98%), Query Frame = 0 
Query:    8 REDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINLSPTALEHLEGSALHILACRQQEQVISDFEELSASPLM-VGDTYLSSC-----EWWSSKNYRWALAQIHSRFVSVATEP--GEPPR----------------KAMAPFFDLFNHSSATPSAISHSFVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLRLLQLYGFVLPDNHFDALDIWARMDPTAPE-FSVKDRALARLAL---RSPFALTRQPPVLSPSLLAAIRIQ---CAKGSEMACLEN-ALKGPL-SAANERETLAALEMALTIMREALPVAREEKE-----WGEEELQERGGEENVEAQLVRTYLESERALLTQGL 351
            RED+ L+IALLYE F R  +  SKWA HI++LPT    NA+   P  L+ LEGS L  +A   +E+V++D+  L  S ++ + D    S      E +S KNY+WA++ I SRFVS+      GE                   KAM P FD+ NH    P A    FV                D+      +V+ +  V G +  +NYGPL N +LL LYGFV+ DN FDA+++W  MD  +   F  K + L    L    +PF L      ++  LL A R+Q   C        L N AL G + S  NE++ L  L   L  M EA P + +E +     W  +   ++    N E   +     SE+ +L++ L
Sbjct:   98 REDEQLAIALLYEKFVRGDK--SKWAKHIDLLPT-TYYNALYFEPEVLKALEGSNLFFIALHIKEKVVADYTRLRDSVILELFDKITESVNVDLEESFSLKNYKWAISTIWSRFVSLQLNDTWGEQTEDIMKKGNISRQIKQSFKAMVPVFDMLNHD---PEAEMSHFV----------------DKTLERFCLVSHQHWVAGSQMFINYGPLSNHKLLTLYGFVIIDNPFDAVEMWLPMDAASTRYFEKKQQLLLSNGLDHATNPFELVADE--VNDLLLIAARLQEIDCETLELFVALANKALNGEIVSLENEQQVLIRLICTLESMLEAFPTSIDEDDELSMSWNNDLGNKQNNRFNHERMAI-CIRRSEKFILSENL 453
The following BLAST results are available for this feature:
BLAST of NO19G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008867988.11.700e-3434.95hypothetical protein H310_05128 [Aphanomyces invad... [more]
XP_008867989.11.700e-3434.95hypothetical protein, variant [Aphanomyces invadan... [more]
OQS00279.12.300e-3436.14hypothetical protein THRCLA_06065 [Thraustotheca c... [more]
XP_012194140.12.800e-3234.63hypothetical protein SPRG_00522 [Saprolegnia paras... [more]
XP_008611801.11.100e-3134.35hypothetical protein SDRG_07727 [Saprolegnia dicli... [more]
OQR89500.14.000e-3134.08hypothetical protein ACHHYP_06253 [Achlya hypogyna... [more]
XP_009837871.18.400e-2931.12hypothetical protein H257_12392 [Aphanomyces astac... [more]
POM58493.18.400e-2934.60Putative histone-lysine N-methyltransferase [Phyto... [more]
XP_009517748.12.400e-2834.26hypothetical protein PHYSODRAFT_553476 [Phytophtho... [more]
XP_024575857.12.400e-2833.07N-methyltransferase [Plasmopara halstedii] >CEG394... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004539NSK004539Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01980.1NO19G01980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599302gene_7599Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01980.1NO19G01980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01980 ID=NO19G01980|Name=NO19G01980|organism=Nannochloropsis oceanica|type=gene|length=1107bp
ATGTCTGATTCTTCAAAATTGCGGGAAGACGATGTACTTAGTATTGCCCT
GCTCTACGAGTGCTTTGGGCGTCCATCTGAGGCGCCTTCTAAATGGGCTA
CGCACATCGAGATGTTGCCCACTGGGCGGCTTCTTAATGCCATTAACTTG
TCGCCGACGGCCCTCGAACACTTAGAAGGGTCCGCCTTGCATATCCTCGC
TTGTCGTCAGCAAGAGCAAGTTATTTCTGACTTTGAAGAGTTGAGTGCCT
CGCCGCTGATGGTGGGGGACACATATTTGTCCAGTTGCGAATGGTGGAGC
TCGAAAAACTACCGTTGGGCATTGGCGCAGATCCACAGTCGATTTGTGAG
TGTCGCAACAGAGCCAGGGGAGCCTCCACGAAAGGCAATGGCCCCCTTTT
TTGACCTCTTCAATCATTCGTCCGCGACACCATCTGCAATCTCACACAGC
TTTGTTGCGGGAAATAGAGCCGTTGGCAGTAAAAATGTGGCTGCTAGCGC
CGATGACGAGAATGAAGGCTCCCTGGTGGTCGTGGCAAGGCGGTCTCTTG
TAGAAGGCGAGGAGGCGTGCTTAAATTACGGCCCCCTTGGAAATCTCCGA
CTGCTCCAGCTGTATGGGTTTGTCCTCCCTGACAATCATTTCGATGCCCT
TGATATATGGGCAAGGATGGACCCGACAGCACCTGAATTCTCGGTCAAAG
ATCGTGCACTCGCTCGCTTGGCTCTCCGGTCGCCTTTCGCCCTGACCAGG
CAGCCCCCCGTCCTCTCCCCCTCTCTCCTCGCGGCAATCCGCATTCAGTG
TGCTAAAGGGTCGGAGATGGCATGTCTGGAAAATGCTTTGAAGGGGCCAC
TAAGTGCGGCCAACGAGAGGGAGACACTGGCGGCCCTGGAAATGGCGCTG
ACTATCATGCGGGAGGCTTTGCCCGTGGCCAGGGAGGAGAAAGAGTGGGG
GGAGGAGGAGTTGCAAGAGAGGGGTGGAGAAGAGAACGTGGAAGCTCAGC
TTGTGCGCACATATTTGGAAAGCGAGCGCGCTCTCTTGACGCAGGGCCTC
GAAGCTGTGGCGGTACTGCAGAGGCAGAAGGCGTACTCTAGTGGGATGGA
ATATTGA
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protein sequence of NO19G01980.1

>NO19G01980.1-protein ID=NO19G01980.1-protein|Name=NO19G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MSDSSKLREDDVLSIALLYECFGRPSEAPSKWATHIEMLPTGRLLNAINL
SPTALEHLEGSALHILACRQQEQVISDFEELSASPLMVGDTYLSSCEWWS
SKNYRWALAQIHSRFVSVATEPGEPPRKAMAPFFDLFNHSSATPSAISHS
FVAGNRAVGSKNVAASADDENEGSLVVVARRSLVEGEEACLNYGPLGNLR
LLQLYGFVLPDNHFDALDIWARMDPTAPEFSVKDRALARLALRSPFALTR
QPPVLSPSLLAAIRIQCAKGSEMACLENALKGPLSAANERETLAALEMAL
TIMREALPVAREEKEWGEEELQERGGEENVEAQLVRTYLESERALLTQGL
EAVAVLQRQKAYSSGMEY*
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Synonyms
Publications