NO19G01820, NO19G01820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO19G01820 vs. NCBI_GenBank
Match: EWM23681.1 (hypothetical protein Naga_100030g29 [Nannochloropsis gaditana]) HSP 1 Score: 352.8 bits (904), Expect = 8.400e-94 Identity = 173/244 (70.90%), Postives = 198/244 (81.15%), Query Frame = 0 Query: 1 MPASSRRGALPATSMILFLAVLLLLQTVVRACLPLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGLVKGV 245 M ASSR S L + T+V CLP G+N+GVT +GT+VC+V S P W +GTSN+SR+AFTP VD+F RLQFSDT+SN+ G+ +LYGPNVAVHVESMGV SFQKLYRQED LGRTF +LTAIINLDRGVVTGITFDNGC LC+NSDRCVENTYDF GE Y+GVGATSDCFLTDAECA N QAD ACQL++Y+TWTGTDA+GNFLTSSSRRFSL S++SV S+VNGLVKGV Sbjct: 1 MSASSRGYLAAFLSPRTLLFCIFQCFTLVYGCLPPGGVNSGVTQAQGTYVCIVFSAPAWQEGTSNFSRVAFTPTVDRFTRLQFSDTFSNLTSQGVANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAECALNAQADRNACQLSLYITWTGTDAQGNFLTSSSRRFSLLSAFSVKSFVNGLVKGV 244
BLAST of NO19G01820 vs. NCBI_GenBank
Match: CBJ29334.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 153.3 bits (386), Expect = 9.800e-34 Identity = 83/204 (40.69%), Postives = 125/204 (61.27%), Query Frame = 0 Query: 42 VTLNRGTHVCVVLSTPEW-VDG-TSNYSRLAFTPNVDKFARLQFSDTYSN---VPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSGVGATSDCFLTDAECAANTQAD--PRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVN 239 VT+ T VC+V++ W VD + YS++ P+ D+F+R +++ + I +G V VHVESMG SFQK +R + +TFP+ TAII++D G VTGI++D+GC C +S +C +NTYD+ G+L G G DC+ D++C + D CQLTVYV WTGTD+KGNF TS ++R S+++ +V ++ Sbjct: 49 VTIGEETSVCLVVNGLGWEVDADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREE-EKTFPLHTAIISVDEGEVTGISWDDGCHFCGSS-QCEDNTYDYTGQLIGGEGNGQDCYWPDSDCLQDGVEDQVSALCQLTVYVVWTGTDSKGNFFTSFAKRLSMYAGETVEGLIS 250
BLAST of NO19G01820 vs. NCBI_GenBank
Match: OEU08436.1 (hypothetical protein FRACYDRAFT_249707 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 131.3 bits (329), Expect = 4.000e-27 Identity = 78/205 (38.05%), Postives = 111/205 (54.15%), Query Frame = 0 Query: 34 PLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNV---PMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSGVGA---TSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYS 233 P+ G A VT+ + T +C+VL++ Y RL F P D ++R D+++ + P +T ++ N+ VH ES SFQKLY + + FP LTAII +++G VTGIT+DN CV C N D C +NTY F G + + A C + C + +A+ C L +YV WTGTD+ G TSS+ RFS F S Sbjct: 56 PVKGYEA-VTIGQPTTICLVLASNGDWSTDMEYMRLNFQPIADDYSRFHVPDSFTQLIGSPKEALTKIFPGNITVHSESQTALSFQKLY--YNGADKVFPFLTAIIAVEKGNVTGITWDNACVFCAN-DECEDNTYGFNGGIATEADAQQPVGGCHSSVVACKDSAEAE---CDLMLYVVWTGTDSNGKDFTSSANRFSAFPKQS 253
BLAST of NO19G01820 vs. NCBI_GenBank
Match: GAX25681.1 (hypothetical protein FisN_15Lh050 [Fistulifera solaris]) HSP 1 Score: 119.8 bits (299), Expect = 1.200e-23 Identity = 71/208 (34.13%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 42 VTLNRGTHVCV-VLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLG----ELYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGLVKGV 245 + + + T VC V +T +W G +Y RL+F P D+++R+ ++++++ + T Y +V + + + F ++Y + R FP LTAII++ G+V G+T+D+ CV C +SD+C E TYDF G + SG T C +T+ EC C LT+YV WTGTDA G SS+ RFS F ++ V+ + V Sbjct: 49 IEIGKQTIVCFHVGNTKDWARGV-DYIRLSFQPEADQYSRMHIPNSFNDLVVESETVFYQRDVTIAAAAQDKSGFLRVY-YDAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFC-SSDKCAEITYDFNGVQQTQATSG-QPTRGCEITEDECNVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFSRFPPQELSDRVSNALPQV 252
BLAST of NO19G01820 vs. NCBI_GenBank
Match: GAX23050.1 (hypothetical protein FisN_15Hh050 [Fistulifera solaris]) HSP 1 Score: 119.0 bits (297), Expect = 2.000e-23 Identity = 71/208 (34.13%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 42 VTLNRGTHVCV-VLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLG----ELYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGLVKGV 245 + + + T VC V +T +W G +Y RL+F P D+++R+ ++++++ + T Y +V + + + F ++Y + R FP LTAII++ G+V G+T+D+ CV C +SD+C E TYDF G + SG T C +T+ EC C LT+YV WTGTDA G SS+ RFS F ++ V+ + V Sbjct: 44 IEIGKQTIVCFHVGNTKDWARGV-DYIRLSFQPEADQYSRMHIPNSFNDLVVESETVFYQRDVTIAAAAQDKSGFLRVY-YDAVEARVFPYLTAIIDVKDGMVRGVTWDDSCVFC-SSDKCPEITYDFNGVQQTQATSG-QPTRGCEITEDECNVLASEGKTLCDLTIYVVWTGTDANGVAFQSSASRFSRFPPQELSDRVSNALPQV 247
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_008618153.1 (hypothetical protein SDRG_13833 [Saprolegnia diclina VS20] >EQC28505.1 hypothetical protein SDRG_13833 [Saprolegnia diclina VS20]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 80/230 (34.78%), Postives = 120/230 (52.17%), Query Frame = 0 Query: 19 LAVLLLLQTVVRACLPLDGM----NAGVTLNRG--THVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTY--DFLGELYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 LAV++ L VV + G+ N+ L +G T++C+ ++ R FTP VD + +L+ ++YS+ I + P+ + + S+ S KLY D GR FP LTAII + G++ GI++D+GC LC+ + C N Y L L S G S C++ C A AC L +YV WTGTD GN+L+S+ R S F ++SV+SYV+ L Sbjct: 5 LAVVVALIAVVADGAIVSGLCNDKNSSTPLVKGDQTYICI---------NVNDMYRAVFTPTVDDYVQLRMYNSYSD---NRIVNASAPSF-LTLSSITTRSVYKLY--TDVTGRAFPTLTAIITVANGIIQGISWDDGCYLCDAAS-CSSNLYASPKLPLLNSAFGDGSTCYMNRTTCTAT----DNACDLGIYVGWTGTDYNGNYLSSAGMRVSQFQAFSVSSYVSDL 214
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_012208869.1 (hypothetical protein SPRG_14351 [Saprolegnia parasitica CBS 223.65] >KDO20413.1 hypothetical protein SPRG_14351 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 110.9 bits (276), Expect = 5.600e-21 Identity = 80/230 (34.78%), Postives = 118/230 (51.30%), Query Frame = 0 Query: 19 LAVLLLLQTVVRACLPLDGM----NAGVTLNRG--THVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGE--LYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 LAV+L L VV + G+ N L +G T++C+ ++ R FTP VD + +L+ ++YS+ I + + + + SM S KLY D GR FP LTAII + G++ GI++D+GC LC+ + C+ N Y L S G S C++ C A AC L +YV WTGTD GN+L+S+ R S F ++SV+SYV+ L Sbjct: 5 LAVVLALIAVVADGAIISGLCNDKNTSTPLVKGDQTYICI---------NVNDMYRAVFTPTVDDYVQLRMYNSYSD---NRIVNASAASF-LTLSSMTSRSVYKLY--ADVTGRAFPTLTAIITVANGIIQGISWDDGCYLCDAAS-CMSNLYASPKRPLLNSAFGDGSTCYMNRTTCTAT----DNACDLGIYVGWTGTDYNGNYLSSAGMRVSQFQAFSVSSYVSDL 214
BLAST of NO19G01820 vs. NCBI_GenBank
Match: AIG56500.1 (secreted protein [Achlya hypogyna] >OQR80816.1 hypothetical protein ACHHYP_17180 [Achlya hypogyna]) HSP 1 Score: 109.4 bits (272), Expect = 1.600e-20 Identity = 62/175 (35.43%), Postives = 100/175 (57.14%), Query Frame = 0 Query: 68 RLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTY--DFLGELYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 R FTP VD + +L+ +Y ++ + +++ + + SM + KLY D GR FP LTAII++ +GV+ GI++D+GC LC +S C+ N Y + + S G+ + C++ C + AC + +YV WTGTD GN+L+S+ R S F ++SV+SYV+ L Sbjct: 50 RAVFTPTVDSYVQLRMYKSYDDLRIQNVSE----PAYLTLSSMTSRTPYKLY--TDLTGRAFPTLTAIISVAKGVIQGISWDDGCYLC-DSKSCLPNLYAAPRIALVNSAFGSGNTCYMNRTAC----MSTDNACDIGIYVGWTGTDYNGNYLSSAGMRISQFQAFSVSSYVSDL 213
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_008876432.1 (hypothetical protein H310_11507 [Aphanomyces invadans] >ETV94841.1 hypothetical protein H310_11507 [Aphanomyces invadans]) HSP 1 Score: 107.8 bits (268), Expect = 4.700e-20 Identity = 74/227 (32.60%), Postives = 113/227 (49.78%), Query Frame = 0 Query: 29 VRACLPLDGMNAG--------------VTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQ-EDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDF-LGELYS-GVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVN 239 + A L G+NAG V T++C+ ++ R F P VDK+ +L+ D+Y + + L N + ++ + + +Y+Q G+ +PILTA++++ +G V GI++D+GC LC+ + C N Y LYS G S C+ AEC T C L+VYV WTGTDA GN+L+S+ R S F YSVNSY++ Sbjct: 11 ITASLCASGVNAGNVSGFCNDRNGTTPVVKGDQTYICI---------NINDQYRAVFAPVVDKYVQLRLHDSYID------SRLRPTNSSAAYMTISSMASRSVYKQYTTARGKAYPILTAVVSVKQGEVQGISWDDGCYLCDMAS-CDPNLYSMPTIPLYSTAFGDGSTCYKDHAECTNTT----GLCDLSVYVGWTGTDANGNYLSSAGMRISQFQKYSVNSYIS 217
BLAST of NO19G01820 vs. NCBI_GenBank
Match: GAY02767.1 (Hypothetical protein PINS_010608 [Pythium insidiosum]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 66/200 (33.00%), Postives = 104/200 (52.00%), Query Frame = 0 Query: 42 VTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSGVGATS-DCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 VT + T VCV ++ R F P D+F + ++++++ +G D G + + SM + S KLY + G +P LTAII++ +G V G+++D+GC C S+ C N Y F + S V C+ A C+ + +C LT+Y+ WTGTD+KGN+L+S+ R S F+ YS+ SY L Sbjct: 41 VTKGQKTFVCV---------NVNDKYRTVFMPVADQFTVFRIANSWNDTRIG--ADPAGAYLT--ISSMAMRSAYKLYASD--AGHIYPFLTAIISVKKGQVQGVSWDDGCYFC-GSEMCEPNLYRFASNVSSRVAKEGYTCYNNVATCSG---PNATSCDLTIYIGWTGTDSKGNYLSSAGLRMSQFTKYSIGSYFKKL 221 The following BLAST results are available for this feature:
BLAST of NO19G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01820 ID=NO19G01820|Name=NO19G01820|organism=Nannochloropsis oceanica|type=gene|length=735bpback to top protein sequence of NO19G01820.1 >NO19G01820.1-protein ID=NO19G01820.1-protein|Name=NO19G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bpback to top Synonyms
Publications
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