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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr19 | genome | chr19:530531..534854 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0017056 | structural constituent of nuclear pore |
| GO:0017056 | structural constituent of nuclear pore |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR037624 | Nup133-like |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006913 | nucleocytoplasmic transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005623 | cell |
Homology
BLAST of NO19G01770 vs. NCBI_GenBank
Match: EWM23663.1 (hypothetical protein Naga_100030g33 [Nannochloropsis gaditana]) HSP 1 Score: 974.9 bits (2519), Expect = 1.900e-280 Identity = 547/969 (56.45%), Postives = 681/969 (70.28%), Query Frame = 0
Query: 58 MSFLPAKRRRGGKQPPFAHLIRERHRGEVADLAQVGLLPEQVTLALVNHQHIEDDAAPVLAGVDGRTARAYILVDNTLYIWQLETAELGKELESPADRSLELLDRQGYPCITADTPAVAVLAPFGPRLPIAVVLTNGRLIWRELDRGGSKSEYTAQLEAGEEVTTAAWEMVRGDLAAGGGEAAGVQIMAFLGTTHGRVYRVGPLGXXXXXXXXXXTISSGPMARPGGLTDYLPWRLRGPGPLERVRSLLVWEEGKGRNQMRRVMALTGERVHLYDTSGAIIAQVKILEQLRALSHDEAVTLVGATLLRPGVALLAAAVGMEEGGDIRLSLFLLDLRQGGXXXXGGERPLANAQAVPLLMQMTSPAGRGGASLPVDAFLQTRLEASRGNTATDMVAYIVQAXXXXXXXXXXXXXXSVLHFQLDGSRELLRANDLQRTELVVPRAADAENSAEAHPAARAGGLLGGGTLLHSDMLILLAGPDRVLRVRAFRHATDGGNAGDSVAVAEKAEAAEAMADEQESLDIAGKVRQAFKLYMELQPAQAQALVEAEGLLDLSDGLPKLGEGLRKAIWQEVDLEPDTASYWVG-GCGGGRGHGEGGQTAQEAFHLLIQHSLRRKLAVAERWLRFLSETGMWAKLSEAQCAALLEGAERIAACQELCAALLPG----GDDGGREMPAALAELLRAHAMPRWGEDLQPQVRARLDGAGLPPLDLFLANPSQVTRKLASLQAARTQYMRRTERPLPKKEQIEASMAISTVVWCALESAIRTRARLQIEHGVLRREAGRGGWLTEAPTLQVMESEVERLRELVRETTQPLSRAHCAVIGEKARQLGTLWLEMGEMSGRWEE--RERGEKKRMAILCVAEYGLVKDALAMARQASAWDVLGELEWLHRGWASGALVDDMARHEEVASHILNWLLEHAELEDVLEYGASSALARVELEKLLGSRPDVPAAARLAWMHHVHVAAF 1020
MSFLPAKRRRGGKQ +R + AD QVGLLPE V L DA+ +LAGVD RTARAYIL N L+ W+LE AEL KE+++P D LELLDRQG PC+T PAV VLAP GPR+P+AVVL+NGRLIWREL+RGG+ SEY AQL+ EEVT AAWE+V GDL AGGGE G Q MAFLGT++GRVYRVGPLG ++SG MARPGGL+DYLPWR+RGPGPLE VRSL+VWEE G+ + RRVM LTGE VHLYD SGAI+ Q+K+LEQLR + +++VTLV AT L P V LLAAAVG E G+ LSLFLLD R+ +R ++ + +PL++++ +P G +SL DA LQT+L +SRGNT TD++AY++ A S+++F+LD + L + LQ + VPR E AG LLG G L +D LILL P+ V+RVR RHA G +A A A ++ K++ AF+L+++ +PA AQ+++EAEGL DL DG LG GL AIWQ+VDLEPDTA YW G G + G E FHLLIQ SLRRKLAVAERWLRF++ETG+W KL+EAQ ALLEGAE +AAC+++C ALLPG G+ GR+MP AL +LLR HAMPRWGEDL P VRARL+ AGLPPLD+FLANPSQV KLASLQAAR +++RRT +P+P+KEQ+EAS+A++ VV ALE+AI RARL+ E+G+ G+GGWLTE PTLQVME EV RL++L RETT+ L A IGE+AR LG WLE+G +SGRW+ E +KKR+A+ CVAEYGL ++A+ MAR+ +AW+VLGELE+ +R WA LV+DMARH+EVA+H+LNWLLE A LEDVLEYGA+S++AR E+EK+ SRPD AAARL+W+HH HV AF
Sbjct: 1 MSFLPAKRRRGGKQAVQVRSLRNYLLVDNADQGQVGLLPESVACNLSG-----CDASSILAGVDDRTARAYILAGNRLFTWRLEPAELDKEMQAPTDTCLELLDRQGLPCVTTSAPAVTVLAPAGPRMPVAVVLSNGRLIWRELERGGANSEYMAQLDPEEEVTAAAWEVVAGDLLAGGGE--GPQTMAFLGTSYGRVYRVGPLG-GGGVRRGNAVMASGAMARPGGLSDYLPWRIRGPGPLESVRSLMVWEEPTGQ-EARRVMTLTGEGVHLYDASGAILLQLKLLEQLRGMCSNDSVTLVRATWLAPRVVLLAAAVGAVE-GEAHLSLFLLDFRE--------QRSTSSVRVIPLVLELAAPTA-GSSSL--DALLQTQLVSSRGNTRTDLLAYVIHA-----FDSHQEGFVSIVNFRLDDGSQSLEPDSLQIRSMAVPRGVIGE-------GLTAGRLLGTGMYLRTDGLILLMEPNCVMRVRYLRHAR-GPSAKQGAAWARDG------GHGSRGRELTEKLQAAFRLHLDARPAAAQSILEAEGLFDLPDGDSDLGAGLLCAIWQDVDLEPDTAPYWAGQGPLPPQHKGSQDVAEGETFHLLIQQSLRRKLAVAERWLRFVTETGLWTKLTEAQAEALLEGAEHVAACEQICEALLPGGGHQGERKGRDMPIALRKLLREHAMPRWGEDLGPHVRARLEAAGLPPLDIFLANPSQVVGKLASLQAARKEFIRRTAQPVPQKEQVEASVAVTVVVRRALEAAINRRARLRKEYGLRPHTGGQGGWLTEPPTLQVMECEVGRLQDLKRETTK-LIPTQRAAIGEEARLLGVRWLELGTLSGRWKAAGEETRKKKRLAVTCVAEYGLAREAIDMARRFAAWEVLGELEYQYRDWA--PLVEDMARHQEVAAHVLNWLLECAHLEDVLEYGATSSMARAEIEKIFMSRPDQLAAARLSWIHHTHVQAF 926
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01770 ID=NO19G01770|Name=NO19G01770|organism=Nannochloropsis oceanica|type=gene|length=4324bp
AAATATCGTCGTCGTCGGACTCCGGAAATGCCTTGGTTCTTCGTTGCCGT
CATTTACGCTCTCACAACTACGCTATACAGCACATGTTTATGTTGCCATC
GCATAAGCATTATTGCCAACCTGCACATCCGCTCGATACCACTATGAATG
CCCTTGTACCCACGTTCTGCTGCTTGTCTCCTCGGAAGGCCATCCCAATT
ATCATGATGATCATTTTCCGTTGTTTTCTTTTTCTACACCACTTTTACAG
CCTCATGTCTTTCCTCCCTGCCAAGCGCCGGCGGGGTGGAAAGCAGCCCC
CATTCGCACATCTAATACGTGAGCGGCATAGAGGGGAAGTGGCTGACCTG
GCGCAAGTGGGCTTACTCCCAGAACAAGTCACCCTGGCCTTGGTCAACCA
CCAACACATCGAGGACGACGCCGCCCCCGTGCTGGCGGGGGTGGACGGTC
GCACGGCTCGAGCGTATATATTGGTGGATAACACCCTGTACATCTGGCAA
TTAGAGACGGCCGAGCTCGGCAAGGAGTTAGAATCCCCGGCGGACCGGTC
TTTGGAGTTGCTGGATCGGCAGGGATACCCCTGCATCACTGCGGATACGC
CGGCTGTGGCCGTGCTGGCGCCCTTTGGGCCCCGTTTGCCAATTGCGGTG
GTGTTGACCAATGGCCGACTAATCTGGCGGGAGCTAGACCGGGGAGGGTC
CAAGAGTGAGTACACGGCCCAGCTTGAAGCGGGGGAGGAAGTGACAACGG
CGGCTTGGGAGATGGTGCGTGGGGATTTGGCAGCCGGGGGTGGCGAGGCA
GCAGGCGTGCAAATCATGGCATTTCTCGGCACCACGCACGGACGCGTGTA
TCGTGTGGGACCTTTGGGTGGTGGTGGTGGTGGTGGAGCAGGAGGCCCAA
CTATTTCCTCGGGTCCAATGGCACGTCCGGGAGGACTGACCGATTATTTG
CCCTGGCGCCTACGGGGGCCCGGGCCACTGGAAAGGGTGCGGAGTCTCTT
GGTGTGGGAGGAGGGAAAGGGGCGGAATCAGATGAGGCGAGTCATGGCTT
TGACAGGGGAGAGAGTGCATCTTTATGATACTTCGGGGgtacgtaacgag
taacaggatggggttggaagttgggtcaggtactatctggcttccttctc
tctgtgctcacaaactagggcattggtacgatatttgacatgactgtctc
acgcattcatactatccttaccaccttcttacagGCAATTATCGCGCAGG
TCAAAATCCTGGAGCAGCTACGAGCCTTGAGCCACGACGAGGCAGTCACC
TTGGTAGGGGCCACGTTGCTCCGACCAGGCGTCGCCTTGCTGGCAGCAGC
TGTAGGCATGGAAGAGGGTGGAGACATACGATTGTCTCTCTTTTTGCTGG
ACCTTCGACAAGGCGGAGGAGGAGGAAATGGTGGAGAGAGGCCCCTCGCG
AATGCCCAGGCAGTGCCGTTGCTAATGCAGATGACGTCGCCAGCAGGGAG
GGGAGGAGCGTCTCTTCCAGTGGATGCTTTCCTTCAAACGCGCCTTGAAG
CCAGCCGTGGCAATACTGCAACAGACATGGTAGCTTATATTGTGCAGGCC
TCCTCGCTCCGACAGCAGCAGCAGCAGCAAGACGACATAATCTCTGTCCT
TCACTTCCAATTAGACGGGTCTAGGGAGCTTTTACGAGCTAACGACCTTC
AGCGCACAGAACTGGTCGTGCCACGCGCCGCTGATGCTGAAAATTCCGCG
GAGGCCCACCCAGCTGCACGAGCAGGGGGATTGCTGGGAGGGGGGACACT
ACTTCATTCAGACATGCTCATCTTGCTCGCGGGCCCCGACAGGGTCCTGC
GTGTGCGGGCATTTCGACACGCGACGGATGGAGGAAATGCAGGAGATTCA
GTTGCAGTAGCAGAAAAAGCTGAAGCGGCAGAGGCGATGGCGGATGAGCA
AGAGAGTCTGGACATAGCAGGAAAGGTGCGGCAGGCGTTCAAACTCTACA
TGGAGCTACAGCCAGCTCAGGCTCAGGCATTGGTGGAGGCGGAGGGCCTC
CTTGACCTTTCTGACGGACTACCGAAACTGGGTGAGGGGCTGCGGAAGGC
TATTTGGCAGGAGGTGGACTTAGAACCGGACACGGCGTCTTACTGGGTTG
GTGGTTGTGGTGGTGGGAGAGGGCATGGGGAGGGAGGGCAGACAGCACAA
GAGGCTTTTCATTTGTTGATTCAGCATTCGCTTCGACGGAAGCTGGCGGT
AGCTGAGAGGTGGCTTCGGTTTTTGTCCGAGACGGGAATGTGGGCTAAGC
TCTCGGAGGCTCAATGTGCAGCTCTGCTGGAGGGAGCTGAACGGATCGCT
GCCTGCCAGGAGCTGTGCGCGGCGCTGCTTCCAGGAGGAGATGATGGAGG
GCGAGAGATGCCCGCAGCGCTTGCGGAGTTGCTAAGGGCACATGCCATGC
CACGGTGGGGGGAGGATTTGCAACCACAGGTCCGTGCCAGATTAGATGGC
GCGGGTTTGCCACCTTTGGATTTGTTCTTAGCGAACCCTAGTCAGGTGAC
GAGGAAATTGGCGTCTTTGCAGGCGGCAAGGACACAATACATGCGTCGGA
CTGAGAGGCCGCTACCTAAGAAGGAGCAGATAGAAGCTAGCATGGCTATT
TCTACTGTGGTTTGGTGCGCGCTTGAATCGGCGATTAGGACGAGAGCGCG
CTTGCAGATAGAGCATGGAGTGCTGCGGAGGGAGGCCGGGAGGGGGGGGT
GGTTGACTGAGGCACCGACCTTGCAAGTAATGGAGAGTGAGGTGGAGAGG
CTCAGGGAGTTGGTGAGGGAGACAACCCAACCCCTCTCTCGGGCGCATTG
TGCGGTTATAGGTGAGAAGGCTCGACAGCTGGGCACTCTGTGGTTGGAGA
TGGGGGAGATGAGTGGACGATGGGAGGAGAGGGAGAGAGGGGAAAAGAAG
CGGATGGCTATTTTGTGCGTGGCGGAGTACGGGCTGGTCAAGGATGCTCT
AGCAATGGCGAGGCAGGCGAGCGCATGGGATGTGTTGGGAGAGTTGGAGT
GGCTTCATCGAGGATGGGCATCAGGGGCGTTGGTGGATGATATGGCGAGG
CATGAGGAGGTGGCCTCGCACATATTGAATTGGCTGTTGGAGCACGCGGA
GCTCGAGGATGTTTTAGAGTATGGCGCGAGTTCAGCGTTGGCGAGGGTTG
AGTTGGAGAAACTACTCGGGAGTCGGCCCGATGTGCCGGCCGCGGCGAGG
TTGGCATGGATGCACCATGTGCATGTGGCGGCATTCGGgtgagtgcctta
taattgcgtttggcatatataccttcatcttgatccagctcatttacatt
tcaatcctctaatgtagttgatgaatgtctgatgccttcgaaaatgttcc
acttcacgatgcttaagtctgccctttatttgttttccctccttcccttt
ccttcctttctttctcaatcgtaatcaagGCGCGCGACGGAAGACTTAAA
ATGCCTAGCCGAAGGTGAAAGGGCGCTCGATCTAAAAAAGCTCTGGGTGG
ATCTAGGTATTCTTAGCGATGAAGCAGCACGGCGGCATCTGCGCGGACAG
GTAGCGGAGGAGGAAGCGCTGATGGCGTTGAAGGAGGAGCAGGAGCTGCT
GCAGGCTCAGAGTTGGCTGGCTGAGCTCTGCCGCCAGCGGGGCGAGATGG
GGGTTGAGGTAAGGAAGATTTTGGAGGGACTCGCTATCGGCCCGGAAGAG
ACTGTTATAGCCTTGATCGACTGGGTCCCGCGGGTAGGGGTGGTCAAAGG
CCAGGCTGTTGAGCTGGCTTTGCGGGCGATGGACCTTATTGATTACTACG
CGGGCCGGCGAGGGGAGGTCTCGCGAGAAGCAGCGAAAGGGTACGTGAAG
GCCTTGTGGGCGGCATTGATTCGGCGGGAAGAGGATTGGAAGGCCGTGTG
GTCGAATTGTGGGGCTAGAGATCCAGGACGCAAGGTAGAGGCGACGGCGT
ATGCAGAGGTGGTGAGTGAATACATGCGCCCTTGGGGCGGCGAAGGCGAG
CGGGCAGGGTACCCGGAACGTCTTGCCACGCCCACTGAAGAAGTGCTAAA
GACGGCAGTACATGGATTGCTTGCCACCATGAAGTACAAACCTCAGGAAG
CGGCGCTTATTACGGCGTTGGAGCGAACACGCAACACTTTGTGGCGTGAG
GAATAAGGAGGAGAATACTTAGCGTGGATGGAGGCATGGATATGTAGAGC
CCATGGCTAAGAAGCCAAAAGTAGAAAAATGAAGTGAAGTGAAAAGTAAA
AATAAAAAAAGTCTAACCGGCAGG back to topprotein sequence of NO19G01770.2 >NO19G01770.2-protein ID=NO19G01770.2-protein|Name=NO19G01770.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1021bp
MFMLPSHKHYCQPAHPLDTTMNALVPTFCCLSPRKAIPIIMMIIFRCFLF
LHHFYSLMSFLPAKRRRGGKQPPFAHLIRERHRGEVADLAQVGLLPEQVT
LALVNHQHIEDDAAPVLAGVDGRTARAYILVDNTLYIWQLETAELGKELE
SPADRSLELLDRQGYPCITADTPAVAVLAPFGPRLPIAVVLTNGRLIWRE
LDRGGSKSEYTAQLEAGEEVTTAAWEMVRGDLAAGGGEAAGVQIMAFLGT
THGRVYRVGPLGGGGGGGAGGPTISSGPMARPGGLTDYLPWRLRGPGPLE
RVRSLLVWEEGKGRNQMRRVMALTGERVHLYDTSGAIIAQVKILEQLRAL
SHDEAVTLVGATLLRPGVALLAAAVGMEEGGDIRLSLFLLDLRQGGGGGN
GGERPLANAQAVPLLMQMTSPAGRGGASLPVDAFLQTRLEASRGNTATDM
VAYIVQASSLRQQQQQQDDIISVLHFQLDGSRELLRANDLQRTELVVPRA
ADAENSAEAHPAARAGGLLGGGTLLHSDMLILLAGPDRVLRVRAFRHATD
GGNAGDSVAVAEKAEAAEAMADEQESLDIAGKVRQAFKLYMELQPAQAQA
LVEAEGLLDLSDGLPKLGEGLRKAIWQEVDLEPDTASYWVGGCGGGRGHG
EGGQTAQEAFHLLIQHSLRRKLAVAERWLRFLSETGMWAKLSEAQCAALL
EGAERIAACQELCAALLPGGDDGGREMPAALAELLRAHAMPRWGEDLQPQ
VRARLDGAGLPPLDLFLANPSQVTRKLASLQAARTQYMRRTERPLPKKEQ
IEASMAISTVVWCALESAIRTRARLQIEHGVLRREAGRGGWLTEAPTLQV
MESEVERLRELVRETTQPLSRAHCAVIGEKARQLGTLWLEMGEMSGRWEE
RERGEKKRMAILCVAEYGLVKDALAMARQASAWDVLGELEWLHRGWASGA
LVDDMARHEEVASHILNWLLEHAELEDVLEYGASSALARVELEKLLGSRP
DVPAAARLAWMHHVHVAAFG* back to topprotein sequence of NO19G01770.1 >NO19G01770.1-protein ID=NO19G01770.1-protein|Name=NO19G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1262bp
MFMLPSHKHYCQPAHPLDTTMNALVPTFCCLSPRKAIPIIMMIIFRCFLF
LHHFYSLMSFLPAKRRRGGKQPPFAHLIRERHRGEVADLAQVGLLPEQVT
LALVNHQHIEDDAAPVLAGVDGRTARAYILVDNTLYIWQLETAELGKELE
SPADRSLELLDRQGYPCITADTPAVAVLAPFGPRLPIAVVLTNGRLIWRE
LDRGGSKSEYTAQLEAGEEVTTAAWEMVRGDLAAGGGEAAGVQIMAFLGT
THGRVYRVGPLGGGGGGGAGGPTISSGPMARPGGLTDYLPWRLRGPGPLE
RVRSLLVWEEGKGRNQMRRVMALTGERVHLYDTSGAIIAQVKILEQLRAL
SHDEAVTLVGATLLRPGVALLAAAVGMEEGGDIRLSLFLLDLRQGGGGGN
GGERPLANAQAVPLLMQMTSPAGRGGASLPVDAFLQTRLEASRGNTATDM
VAYIVQASSLRQQQQQQDDIISVLHFQLDGSRELLRANDLQRTELVVPRA
ADAENSAEAHPAARAGGLLGGGTLLHSDMLILLAGPDRVLRVRAFRHATD
GGNAGDSVAVAEKAEAAEAMADEQESLDIAGKVRQAFKLYMELQPAQAQA
LVEAEGLLDLSDGLPKLGEGLRKAIWQEVDLEPDTASYWVGGCGGGRGHG
EGGQTAQEAFHLLIQHSLRRKLAVAERWLRFLSETGMWAKLSEAQCAALL
EGAERIAACQELCAALLPGGDDGGREMPAALAELLRAHAMPRWGEDLQPQ
VRARLDGAGLPPLDLFLANPSQVTRKLASLQAARTQYMRRTERPLPKKEQ
IEASMAISTVVWCALESAIRTRARLQIEHGVLRREAGRGGWLTEAPTLQV
MESEVERLRELVRETTQPLSRAHCAVIGEKARQLGTLWLEMGEMSGRWEE
RERGEKKRMAILCVAEYGLVKDALAMARQASAWDVLGELEWLHRGWASGA
LVDDMARHEEVASHILNWLLEHAELEDVLEYGASSALARVELEKLLGSRP
DVPAAARLAWMHHVHVAAFGRATEDLKCLAEGERALDLKKLWVDLGILSD
EAARRHLRGQVAEEEALMALKEEQELLQAQSWLAELCRQRGEMGVEVRKI
LEGLAIGPEETVIALIDWVPRVGVVKGQAVELALRAMDLIDYYAGRRGEV
SREAAKGYVKALWAALIRREEDWKAVWSNCGARDPGRKVEATAYAEVVSE
YMRPWGGEGERAGYPERLATPTEEVLKTAVHGLLATMKYKPQEAALITAL
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