Naga_100030g33, gene6778 (gene) Nannochloropsis gaditana

Overview
NameNaga_100030g33
Unique Namegene6778
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:234237..238351 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100030g33
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:234237..238351 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL039ngnoL039Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01770NO19G01770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7012rna7012-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7012rna7012Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7012

>rna7012-protein ID=rna7012-protein|Name=rna7012|organism=Nannochloropsis gaditana|type=polypeptide|length=1172bp
MSFLPAKRRRGGKQAVQVRSLRNYLLVDNADQGQVGLLPESVACNLSGCD
ASSILAGVDDRTARAYILAGNRLFTWRLEPAELDKEMQAPTDTCLELLDR
QGLPCVTTSAPAVTVLAPAGPRMPVAVVLSNGRLIWRELERGGANSEYMA
QLDPEEEVTAAAWEVVAGDLLAGGGEGPQTMAFLGTSYGRVYRVGPLGGG
GVRRGNAVMASGAMARPGGLSDYLPWRIRGPGPLESVRSLMVWEEPTGQE
ARRVMTLTGEGVHLYDASGAILLQLKLLEQLRGMCSNDSVTLVRATWLAP
RVVLLAAAVGAVEGEAHLSLFLLDFREQRSTSSVRVIPLVLELAAPTAGS
SSLDALLQTQLVSSRGNTRTDLLAYVIHAFDSHQEGFVSIVNFRLDDGSQ
SLEPDSLQIRSMAVPRGVIGEGLTAGRLLGTGMYLRTDGLILLMEPNCVM
RVRYLRHARGPSAKQGAAWARDGGHGSRGRELTEKLQAAFRLHLDARPAA
AQSILEAEGLFDLPDGDSDLGAGLLCAIWQDVDLEPDTAPYWAGQGPLPP
QHKGSQDVAEGETFHLLIQQSLRRKLAVAERWLRFVTETGLWTKLTEAQA
EALLEGAEHVAACEQICEALLPGGGHQGERKGRDMPIALRKLLREHAMPR
WGEDLGPHVRARLEAAGLPPLDIFLANPSQVVGKLASLQAARKEFIRRTA
QPVPQKEQVEASVAVTVVVRRALEAAINRRARLRKEYGLRPHTGGQGGWL
TEPPTLQVMECEVGRLQDLKRETTKLIPTQRAAIGEEARLLGVRWLELGT
LSGRWKAAGEETRKKKRLAVTCVAEYGLAREAIDMARRFAAWEVLGELEY
QYRDWAPLVEDMARHQEVAAHVLNWLLECAHLEDVLEYGATSSMARAEIE
KIFMSRPDQLAAARLSWIHHTHVQAFDNGAQDLLGLADEEKTLDLKRLWV
DIGILSDETARNHSQSEEINLEARWALQEEQELLQAQSWLVSLIRDGQQD
AKGAMKSLQEGVAIGPSQTIEALIQLVPLRGTSKEKAVELSLRAMDLIEH
YGGRRQEVPRPVVRQLVEALWEALLRRDDDWNLVWCNCGTVDPGRNIEET
AYATVIRRYFESPRRKEDRRHYSELLSTPTEDVLAVVVRGVLATTKYKPQ
YSALLTALDRTRNTLWREFGEK
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Synonyms
Publications