NO19G01350, NO19G01350 (gene) Nannochloropsis oceanica

Overview
NameNO19G01350
Unique NameNO19G01350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2152
Alignment locationchr19:419783..421934 -

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Properties
Property NameValue
DescriptionDihydrolipoamide succinyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:419783..421934 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006091generation of precursor metabolites and energy
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR011053Single_hybrid_motif
IPR000089Biotin_lipoyl
IPR0010782-oxoacid_DH_actylTfrase
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO19G01350 vs. NCBI_GenBank
Match: EWM23638.1 (dihydrolipoamide succinyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 537.7 bits (1384), Expect = 3.500e-149
Identity = 367/470 (78.09%), Postives = 392/470 (83.40%), Query Frame = 0
Query:    1 MLRRGVQSTSQGLQGSINAATKMAVGHTRNTFKSVPLVRLLHASSSPSSTHLLLRSTVNRIQHTFTQRDPFQFAVRAFSTPDGSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            MLRRG+ STS  LQG+I AA   A GH R T ++ P+  L+HA S+ + + L  +     I    T R      +RA S   G +F+LNVPSMGDSITEGTIVNWQK+ GDWV+ADDVIVVLETDKVSVDVRAPR+GI+ EVIGAE DTVGVG PLAKIDT+A          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 AERLKSAQNTAAMLTTFQEVDMGNLM+MR AYKEEFEK HGVKLGFMSAFVKASTAAL E+PAVNAFID+GTKEIVYR+YCDVSVAVASPAGLVVPVLRNAE MSFAGVE+QIA+YGKKAKEG LALEDMAGGTFTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVVG+DGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL
Sbjct:    2 MLRRGLWSTSSRLQGNIRAAAGRA-GHIRLTTQAAPVTNLVHAFSNSTLSTLPHQGPCRPIPAWSTHR---SLPIRALSASAGQDFILNVPSMGDSITEGTIVNWQKKVGDWVDADDVIVVLETDKVSVDVRAPRSGIITEVIGAEDDTVGVGVPLAKIDTTA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNRSETRVKMNRMRLRIAERLKSAQNTAAMLTTFQEVDMGNLMDMRKAYKEEFEKVHGVKLGFMSAFVKASTAALQEIPAVNAFIDDGTKEIVYRDYCDVSVAVASPAGLVVPVLRNAERMSFAGVERQIAMYGKKAKEGALALEDMAGGTFTISNGGVFGSLLGTPIINPPQSAILGMHATKMRAVVGKDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 465          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_009037630.1 (hypothetical protein AURANDRAFT_71782 [Aureococcus anophagefferens] >EGB07632.1 hypothetical protein AURANDRAFT_71782 [Aureococcus anophagefferens])

HSP 1 Score: 404.4 bits (1038), Expect = 4.700e-109
Identity = 272/401 (67.83%), Postives = 301/401 (75.06%), Query Frame = 0
Query:   70 PFQFAVRAFSTPDGSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            P   A R FS  D     + VPSMGDSITEGT+  W    GD V  DD++V++ETDKVSV+VRAP +G V E++    D V VG+PL KIDTS      A                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   AERLK AQNTAA LTTFQE DMG LME+R A+K+EFEK HGVKLGFMSAFV AST AL+E+PAVNA+ID+  KEIVYR+YCDVSVAVASP GLVVPVLRN E+MSFA VEK I  +G KA+ G LALEDMAGGTFTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVV +DG V+ARPMMYLALTYDHR+IDGREAVTFLKSVA KIEDP R++L++
Sbjct:  419 PRAVAARCFSVED-----VPVPSMGDSITEGTVAEWSVEVGDTVAVDDIVVMIETDKVSVEVRAPVSGAVTELLAELDDVVEVGAPLFKIDTSVEVAAAA-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSRGETRVKMNRMRQRIAERLKEAQNTAACLTTFQECDMGALMELRKAHKDEFEKVHGVKLGFMSAFVAASTKALIEIPAVNAYIDDDAKEIVYRDYCDVSVAVASPNGLVVPVLRNTEAMSFADVEKTIGAFGAKARAGALALEDMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVAKDGSVVARPMMYLALTYDHRMIDGREAVTFLKSVANKIEDPARLLLDI 795          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_002184355.1 (dihydrolipoamide succinyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC44104.1 dihydrolipoamide succinyltransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 395.2 bits (1014), Expect = 2.800e-106
Identity = 277/379 (73.09%), Postives = 310/379 (81.79%), Query Frame = 0
Query:   93 MGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEG-ASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            MGDSI+EGTIV+     GD+VN DDV+VVLETDKVSVDVRAP AG + E++G   D V VG+ L +IDT A  PE   +PE+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   A RLK AQNTAAMLTTFQEVDMGNLME+R  YK+ F++ HGVKLGFMSAFVKA+TAAL E+PAVN +ID  T+EIVYR + D+SVAVASP GLVVPVLRN E+MSFA VE+ IA YG+KAKEG L+L+DMAGGTFTISNGGVFGSL GTPIINPPQSAILGMHATKMRAVV   G+V+ARPMMYLALTYDHRLIDGRE VTFLKS+A KI DP +++LE+
Sbjct:    1 MGDSISEGTIVDLPVAPGDFVNVDDVVVVLETDKVSVDVRAPEAGALVEILGEIDDVVEVGTNLFRIDTDADAPEAPVAPES--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLGTRNERRTKMSRMRQRVAARLKDAQNTAAMLTTFQEVDMGNLMELRKRYKDVFQEKHGVKLGFMSAFVKATTAALQEIPAVNGYIDNDTQEIVYREFVDISVAVASPNGLVVPVLRNTETMSFADVERNIAAYGQKAKEGSLSLDDMAGGTFTISNGGVFGSLMGTPIINPPQSAILGMHATKMRAVVNEQGEVVARPMMYLALTYDHRLIDGREGVTFLKSIAEKIADPSKLLLEI 377          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: GAX15623.1 (2-oxoglutarate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 391.3 bits (1004), Expect = 4.100e-105
Identity = 265/385 (68.83%), Postives = 297/385 (77.14%), Query Frame = 0
Query:   88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGAS-PEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVG-RDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            + VP+MGDSITEGTIV+     GD++  DDV+VVLETDKVSVDVRAP AG + EV+G   D V VGS L +IDT A  PE ++ P             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      A RLK AQNTAAMLTTFQE DMGNLMEMR  YK+EF K H VKLGFMSAFVKA+TAAL ELPAVNA++D+  KEIVYR Y D+SVAVASPAGLVVPVLRN E+M FA VE+ IA+Y +KAK G L+L+DMAGGTFTISNGGVFGSL GTPI+NPPQSAILGMHATKMR VV  + G ++ARPMMYLALTYDHRLIDGRE VTFLKS+A KI DP +++LE+
Sbjct:   45 IEVPTMGDSITEGTIVDIPVGPGDFLQVDDVVVVLETDKVSVDVRAPVAGALVEVLGEVDDVVEVGSALFRIDTDADAPESSTQPPVPEEVAHSIEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTLFLGQRTERRTKMSRMRQRVAARLKDAQNTAAMLTTFQECDMGNLMEMRNKYKDEFFKKHDVKLGFMSAFVKAATAALQELPAVNAYMDDENKEIVYREYVDISVAVASPAGLVVPVLRNTETMGFADVERNIAMYAEKAKNGTLSLDDMAGGTFTISNGGVFGSLMGTPILNPPQSAILGMHATKMRPVVDPKTGDIIARPMMYLALTYDHRLIDGREGVTFLKSIAEKISDPAKLLLEI 429          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_002293235.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89696.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 388.3 bits (996), Expect = 3.500e-104
Identity = 263/381 (69.03%), Postives = 296/381 (77.69%), Query Frame = 0
Query:   90 VPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            VP+MGDSITEGTIV+     GD+V+ DDV++VLETDKVSVDVRAP  G V E++G   D V VGS L ++DT   KP   +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              A RLK +QNTAAMLTTFQEVDMGN MEMR  +K++F K HGVKLGFMS FVKA T+AL E+PA+NA+ID+  KEIVYR+YCD+SVAVASP GLVVPVLRN E M+FA VE+ IAL+G+KAK+G LA++DMAGGTFTISNGGVFGSL GTPIIN PQSAILGMHATKMRAVV   G V+ARPMMYLALTYDHRLIDGRE VTFLKSVA KI DP R+V ++
Sbjct:    1 VPTMGDSITEGTIVDIPVAPGDYVSEDDVVLVLETDKVSVDVRAPEGGCVVEILGEVDDVVEVGSALYRLDTDGVKP---AEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQLPQMESITTNLGNRPERRSKMSRMRQRVATRLKESQNTAAMLTTFQEVDMGNFMEMRHRHKDDFAKKHGVKLGFMSVFVKACTSALQEVPAINAYIDDEAKEIVYRDYCDISVAVASPNGLVVPVLRNTEFMTFADVERTIALFGQKAKDGTLAIDDMAGGTFTISNGGVFGSLMGTPIINQPQSAILGMHATKMRAVVDEKGNVVARPMMYLALTYDHRLIDGREGVTFLKSVADKITDPARLVFDI 378          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: GAX19151.1 (2-oxoglutarate dehydrogenase E2 component [Fistulifera solaris])

HSP 1 Score: 386.3 bits (991), Expect = 1.300e-103
Identity = 272/389 (69.92%), Postives = 304/389 (78.15%), Query Frame = 0
Query:   88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGA-----SPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVG-RDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            + VP+MGDSITEGTIV+     GD++  DDV+VVLETDKVSVDVRAP AG + EV+G   D V VGS L +IDT A  PE +         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         A RLK AQNTAAMLTTFQE DMGNLMEMR  YK+EF K H VKLGFMSAFVKA+TAAL ELPAVNA++D+  KEIVYR Y D+SVAVASPAGLVVPVLRN E+M FA VE+ IA+Y +KAK G L+L+DMAGGTFTISNGGVFGSL GTPI+NPPQSAILGMHATKMR VV  + G+++ARPMMYLALTYDHRLIDGRE VTFLKS+A KI DP +++LE+
Sbjct:    6 IEVPTMGDSITEGTIVDIPVGPGDFLQVDDVVVVLETDKVSVDVRAPVAGALVEVLGEVDDVVEVGSALFRIDTDADAPESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISEQTLFLGQRTERRTKMSRMRQRVAARLKDAQNTAAMLTTFQECDMGNLMEMRNKYKDEFFKKHDVKLGFMSAFVKAATAALQELPAVNAYMDDENKEIVYREYVDISVAVASPAGLVVPVLRNTETMGFADVERNIAMYAEKAKNGTLSLDDMAGGTFTISNGGVFGSLMGTPILNPPQSAILGMHATKMRPVVDPKTGEIIARPMMYLALTYDHRLIDGREGVTFLKSIAEKISDPAKLLLEI 394          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: OQS05892.1 (dihydrolipoamide succinyltransferase, partial [Thraustotheca clavata])

HSP 1 Score: 357.8 bits (917), Expect = 5.000e-95
Identity = 226/388 (58.25%), Postives = 273/388 (70.36%), Query Frame = 0
Query:   83 GSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            G    +NVPSMGDSI+EGT+V+W K  GD V+ D+V++VLETDKVSVDVRAP+AG++++ +    D V +G+PL  +   AA    ASP                       XXXXXXXXXXXXXXXXXXXXXXXXXXXX                            AERLK +QN++A LTTFQEVDM  LM MR  YK+ FE  H VKLGFMSAF+KAS  ALLE+P VNA ID+   EI+YR++ D+SVAVA+P GLV PV+RN ESMSFA +EK +A   +KA+ G++ +ED+AGGTFTISNGGVFGSL GTPIIN PQS ILGMHATKMR VV  +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L
Sbjct:   28 GEPITVNVPSMGDSISEGTVVSWTKNVGDHVDVDEVVLVLETDKVSVDVRAPQAGVIQKTLVNVDDVVEIGAPLFHLVPGAAP---ASP-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXENITAPVFAHGPSREVRREKMNRMRLRIAERLKESQNSSASLTTFQEVDMSKLMAMRKTYKDAFEAKHNVKLGFMSAFIKASANALLEVPGVNASIDDAHNEIIYRDFVDISVAVATPKGLVTPVIRNTESMSFADIEKSLAHLAEKARAGEITMEDLAGGTFTISNGGVFGSLMGTPIINVPQSGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTALKSIADKIADPERLLLDL 389          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_008613424.1 (2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), variant [Saprolegnia diclina VS20] >EQC33301.1 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), variant [Saprolegnia diclina VS20])

HSP 1 Score: 357.5 bits (916), Expect = 6.600e-95
Identity = 253/433 (58.43%), Postives = 298/433 (68.82%), Query Frame = 0
Query:   38 VRLLHASSSPSSTHLLLRSTVNRIQHTFTQRDPFQFAVRAFSTPDGSNFLLNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            V  L A+S   ++  +  +++ R+Q           A R FST D     + VPSMGDSI+EGT+V W K  GD V ADDV+VVLETDKVSVDVRAP+AG++++ +    D V +G+PL  +   AA                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      AERLK +QNT+A LTTFQEVDM  LM MR  YK+ FE  H VKLGFMSAF+KAS  ALLE+P VNA IDE   EIVYR++ D+SVAVA+P GLV PVLRN ESM FA +EK +A   +KA+ G + +EDMAGGTFTISNGGVFGSL GTPIIN PQS ILGMHATKMR VV  +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L
Sbjct:   23 VPALSAASFNGASRAISMTSMGRVQVGAP-----NMARRMFSTID-----IPVPSMGDSISEGTVVEWVKAVGDRVEADDVVVVLETDKVSVDVRAPQAGVIQKTLVNVDDVVEIGAPLFHMVPGAA-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMLGGASREVRREKMNRMRLRIAERLKESQNTSASLTTFQEVDMSKLMAMRKTYKDAFEAKHNVKLGFMSAFIKASANALLEVPGVNASIDEAHSEIVYRDFVDISVAVATPKGLVTPVLRNTESMGFADIEKSLAHLAEKARAGAITMEDMAGGTFTISNGGVFGSLMGTPIINVPQSGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTCLKSIADKIADPERLLLDL 422          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_009821610.1 (hypothetical protein H257_00569 [Aphanomyces astaci] >ETV89210.1 hypothetical protein H257_00569 [Aphanomyces astaci])

HSP 1 Score: 356.7 bits (914), Expect = 1.100e-94
Identity = 227/383 (59.27%), Postives = 275/383 (71.80%), Query Frame = 0
Query:   88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            +NVPSMGDSI+EGT+V+W K  GD V ADDV++V+ETDKVSVDVRAP+AG++++ +    D V +G+PL  +   A+   GA+  A                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              AERLK +QNT+A LTTFQEVDM  LM +R+ YK+ FEK H VKLGFMSAF+KAS AALLE P VNA ID+   EI+YR++ D+SVAVA+P GLV PVL+N ESMSFA +EK +A   +KA+ G++ +EDMAGG FTISNGGVFGSL GTPIIN PQ+ ILGMHATKMR VV  +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L
Sbjct:  168 VNVPSMGDSISEGTVVSWTKGPGDHVEADDVVLVIETDKVSVDVRAPQAGVIQQSLVNVEDVVTIGAPLFTLIPGAS---GATKAA----------------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATNISSPLLGGSLPRGTTREKMSRMRLRIAERLKESQNTSASLTTFQEVDMSKLMALRSTYKDSFEKKHHVKLGFMSAFIKASAAALLENPGVNASIDDKHAEIIYRDFVDISVAVATPKGLVTPVLKNTESMSFADIEKTLAQLAEKARAGEITMEDMAGGNFTISNGGVFGSLMGTPIINVPQAGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTCLKSIADKIADPERLLLDL 531          
BLAST of NO19G01350 vs. NCBI_GenBank
Match: XP_008613423.1 (2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [Saprolegnia diclina VS20] >EQC33300.1 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [Saprolegnia diclina VS20])

HSP 1 Score: 355.5 bits (911), Expect = 2.500e-94
Identity = 239/383 (62.40%), Postives = 280/383 (73.11%), Query Frame = 0
Query:   88 LNVPSMGDSITEGTIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTVGVGSPLAKIDTSAAKPEGASPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAFVKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRNAESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTPIINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAVTFLKSVAAKIEDPRRMVLEL 471
            +NVPSMGDSI+EGT+V+W K  GD V+ D+V++VLETDKVSVDVRAP+AG++++ +    D V +G+PL  +   AA                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      AERLK +QNT+A LTTFQEVDM  LM MR  YK+ FE  H VKLGFMSAF+KAS  ALLE+P VNA IDE   EIVYR++ D+SVAVA+P GLV PVLRN ESM FA +EK +A   +KA+ G + +EDMAGGTFTISNGGVFGSL GTPIIN PQS ILGMHATKMR VV  +G+++ARPMMYLALTYDHRL+DGREAVT LKS+A KI DP R++L+L
Sbjct:  174 VNVPSMGDSISEGTVVSWTKGAGDHVDVDEVVLVLETDKVSVDVRAPQAGVIQKTLVNVDDVVEIGAPLFHMVPGAA-----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMLGGASREVRREKMNRMRLRIAERLKESQNTSASLTTFQEVDMSKLMAMRKTYKDAFEAKHNVKLGFMSAFIKASANALLEVPGVNASIDEAHSEIVYRDFVDISVAVATPKGLVTPVLRNTESMGFADIEKSLAHLAEKARAGAITMEDMAGGTFTISNGGVFGSLMGTPIINVPQSGILGMHATKMRPVVLANGEIVARPMMYLALTYDHRLVDGREAVTCLKSIADKIADPERLLLDL 533          
The following BLAST results are available for this feature:
BLAST of NO19G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23638.13.500e-14978.09dihydrolipoamide succinyltransferase [Nannochlorop... [more]
XP_009037630.14.700e-10967.83hypothetical protein AURANDRAFT_71782 [Aureococcus... [more]
XP_002184355.12.800e-10673.09dihydrolipoamide succinyltransferase [Phaeodactylu... [more]
GAX15623.14.100e-10568.832-oxoglutarate dehydrogenase E2 component [Fistuli... [more]
XP_002293235.13.500e-10469.03predicted protein, partial [Thalassiosira pseudona... [more]
GAX19151.11.300e-10369.922-oxoglutarate dehydrogenase E2 component [Fistuli... [more]
OQS05892.15.000e-9558.25dihydrolipoamide succinyltransferase, partial [Thr... [more]
XP_008613424.16.600e-9558.432-oxoglutarate dehydrogenase E2 component (dihydro... [more]
XP_009821610.11.100e-9459.27hypothetical protein H257_00569 [Aphanomyces astac... [more]
XP_008613423.12.500e-9462.402-oxoglutarate dehydrogenase E2 component (dihydro... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL013nonsL013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR037ngnoR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004474NSK004474Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01350.1NO19G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599068gene_7529Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100165g9gene6818Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01350.1NO19G01350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01350 ID=NO19G01350|Name=NO19G01350|organism=Nannochloropsis oceanica|type=gene|length=2152bp
ACAGAGAAGCGTACGCGCTCGCTTTTTTCGTGTGATCTCATGCTGCGTCG
CGGGGTCCAGTCCACGTCCCAGGGGCTTCAGGGCAGCATCAACGCAGCGA
CCAAGATGGCGGTAGGGgtaagttcttgcttgcttccataagttgtactt
ttcgacccaagcggtgtgggaaataaaaagcggagggcattggttgtatc
ggcagggtgtgactgattcccattaagcaggtctgtgggagttccagtgc
tcgcaattgtcataacgatgtttggctggcaacgaggacaaaggcaggat
ggggagggtgatgaatcggaggaggacggacgagtcccaatcaagtccag
ctgcaatcttggggtacgcccgctcgagcaagacagaaaggggaagagga
gaagacaagtgtatcgtcacctaggacccactttatccatcgaaagaagg
acgacgatgatcgcccccccctctctcacccaccccctcccacactaccc
acaacaccacagCACACCCGCAACACCTTCAAGTCTGTGCCGCTGGTCAG
ACTTCTGCATGCCTCCTCTTCCCCCTCCTCGACTCATCTCCTGTTGCGTA
GCACAGTCAACCGAATCCAACATACCTTTACGCAGCGAGACCCCTTCCAG
TTCGCAGTTCGGGCCTTCTCCACCCCCGATGGGTCCAACTTCCTCCTCAA
CGTCCCCAGTATGGGCGATTCCATCACAGAGGGCACCATCGTCAATTGGC
AGAAACGAGAAGGGGACTGGGTGAACGCCGATGATGTCATCGTGGTCCTC
GAGACCGACAAAGTCAGTGTAGATGTCCGTGCACCCCGCGCAGGGATCGT
TAAGGAGGTGATTGGCGCTGAAGGCGATACCGTTGGCGTCGGTTCTCCCC
TAGCCAAGATTGACACGTCGGCCGCCAAGCCTGAAGGTGCTTCCCCGGAA
GCAGTTGCTTCTGCTCCTGCCCCTCCTCCCCCTAAGGCCGCTGCTGAAGC
TCCTGCTTCTGCCACCCCTCCTCCTCCCCCTCCTCCCAACCCGGCCCCTA
CTGCGGCCAAACCTACTCCTTCTCCTGCTGCTGCTGTCAAACCCTCCTCT
CCTGCCCCCGCAACCGCTGCATCAGCCGCCGCTGGCTCGCGCACGGAGAC
CCGGGTGAAGATGAACCGGATGCGTCTTCGTATTGCCGAACGGCTTAAAA
GTGCGCAGAACACCGCGGCGATGCTGACGACCTTCCAGGAAGTGGACATG
GGTAACTTGATGGAGATGCGGGCTGCTTACAAGGAGGAGTTTGAGAAGAC
CCACGGTGTGAAACTTGGTTTTATGTCGGCGTTTGTGAAGGCCTCGACGG
CCGCTCTTCTGGAGCTGCCGGCCGTGAATGCTTTCATTGACGAGGGGACC
AAGGAGATCGTGTATAGAAACTACTGCGATGTTTCGGTGGCTGTAGCGAG
TCCGGCTGGCTTAGTCGTGCCAGTGTTGAGGAATGCAGAGAGTATGTCTT
TCGCAGGGGTGGAGAAACAGATTGCTCTGTACGGGAAAAAGGCGAAGGAG
GGGCAGCTGGCCTTGGAGGACATGGCGGGCGGAACGTTCACGATTTCGAA
TGGCGGGGTGTTTGGGAGTTTGTTTGGGACTCCAATTATTAACCCGCCAC
AAAGCGCGATTCTCGGAATGCATGCAACCAAGATGAGGGCGGTGGTCGGG
AGGGATGGCCAGGTGATGGCGAGGCCGATGATGTACTTGGCGCTGACGTA
TGACCATCGTTTGATCGATGGTCGGGAGGCGGTGACGTTTTTGAAAAGCG
TTGCGGCCAAGATTGAAGACCCGAGGCGGATGGTGTTGGAACTTTGAGTG
TAGAGGGGAGTAGGGGAGCATAAGAGGAGAATTTATGTTGTGTAGGGGTA
GATGGGGGATGAATCTGGCGGGAGGGGCTTGACTTAGTATATTTATTTCT
TGTTCGGTTGGAGCGTAAGGACAAAGCATTACTTTTGTCGGAGGAACGGG
GATCTACTAAAACGGGCGAGAAAATAGAGAGAGTTGGAAACGCGGAGGGT
GGCAGGGCACGGCAGAAATGTACGAAAGAGAGTAGCCGTGCAGAAGGCAG
TTAGACGCAACGACCTCTGTATCGAAGAGAATTTTGAGGCTGTCAGGTGA
AC
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protein sequence of NO19G01350.1

>NO19G01350.1-protein ID=NO19G01350.1-protein|Name=NO19G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp
MLRRGVQSTSQGLQGSINAATKMAVGHTRNTFKSVPLVRLLHASSSPSST
HLLLRSTVNRIQHTFTQRDPFQFAVRAFSTPDGSNFLLNVPSMGDSITEG
TIVNWQKREGDWVNADDVIVVLETDKVSVDVRAPRAGIVKEVIGAEGDTV
GVGSPLAKIDTSAAKPEGASPEAVASAPAPPPPKAAAEAPASATPPPPPP
PNPAPTAAKPTPSPAAAVKPSSPAPATAASAAAGSRTETRVKMNRMRLRI
AERLKSAQNTAAMLTTFQEVDMGNLMEMRAAYKEEFEKTHGVKLGFMSAF
VKASTAALLELPAVNAFIDEGTKEIVYRNYCDVSVAVASPAGLVVPVLRN
AESMSFAGVEKQIALYGKKAKEGQLALEDMAGGTFTISNGGVFGSLFGTP
IINPPQSAILGMHATKMRAVVGRDGQVMARPMMYLALTYDHRLIDGREAV
TFLKSVAAKIEDPRRMVLEL*
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Synonyms
Publications