NO19G01090, NO19G01090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01090 vs. NCBI_GenBank
Match: OEU20386.1 (dynactin-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 81.3 bits (199), Expect = 4.100e-12 Identity = 58/113 (51.33%), Postives = 75/113 (66.37%), Query Frame = 0 Query: 14 TTTNYISRKALIEGPQYVEMRGRSIVEEDVTIRGDLAPIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIGS 127 TT NY+SR+A+I+G + VE+RGRSI+ E V +RGDL+ I++G Y + ++L P Y P XXXXXXXXXXXX YIPM IGS T+IG + IQAA+IGS Sbjct: 26 TTHNYVSRRAIIDGAKQVEIRGRSIIHEKVKVRGDLSIIKIGRYVEIGSSTLLE-------PSYNP-------YNXXXXXXXXXXXXXYIPMIIGSHTHIGKECTIQAAAIGS 124
BLAST of NO19G01090 vs. NCBI_GenBank
Match: XP_001949241.1 (PREDICTED: dynactin subunit 5 [Acyrthosiphon pisum]) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-7 Identity = 42/120 (35.00%), Postives = 58/120 (48.33%), Query Frame = 0 Query: 7 ASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDLAPIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIG 126 + SEY+ TTT N +SR+A I G Q + + G+ I++ V IRGDLA +++G YCF GSV+ P Y + IG +IG +VIQAA IG Sbjct: 9 SKSEYVETTTGNKVSRQAQIYGSQNIILNGKVILQSGVMIRGDLASVKMGRYCFVGKGSVVRP-----------------------PCKKFSGGFTYFALQIGDHVHIGEQSVIQAAIIG 105
BLAST of NO19G01090 vs. NCBI_GenBank
Match: XP_015370786.1 (PREDICTED: dynactin subunit 5 [Diuraphis noxia]) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-7 Identity = 42/120 (35.00%), Postives = 58/120 (48.33%), Query Frame = 0 Query: 7 ASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDLAPIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIG 126 + SEY+ TTT N +SR+A I G Q + + G+ I++ V IRGDLA +++G YCF GSV+ P Y + IG +IG +VIQAA IG Sbjct: 9 SKSEYVETTTGNKVSRQAQIYGSQNIILNGKVILQSGVMIRGDLASVKMGRYCFVGRGSVVRP-----------------------PCKKFSGGFTYFALQIGDHVHIGEQSVIQAAIIG 105
BLAST of NO19G01090 vs. NCBI_GenBank
Match: XP_022173379.1 (dynactin subunit 5 [Myzus persicae]) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-7 Identity = 42/120 (35.00%), Postives = 58/120 (48.33%), Query Frame = 0 Query: 7 ASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDLAPIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIG 126 + SEY+ TTT N +SR+A I G Q + + G+ I++ V IRGDLA +++G YCF GSV+ P Y + IG +IG +VIQAA IG Sbjct: 9 SKSEYVETTTGNKVSRQAQIYGSQNIILNGKVILQSGVMIRGDLASVKMGRYCFVGRGSVVRP-----------------------PCKKFSGGFTYFALQIGDHVHIGEQSVIQAAIIG 105
BLAST of NO19G01090 vs. NCBI_GenBank
Match: XP_007406117.1 (hypothetical protein MELLADRAFT_33751 [Melampsora larici-populina 98AG31] >EGG10648.1 hypothetical protein MELLADRAFT_33751 [Melampsora larici-populina 98AG31]) HSP 1 Score: 65.9 bits (159), Expect = 1.800e-7 Identity = 67/190 (35.26%), Postives = 86/190 (45.26%), Query Frame = 0 Query: 9 SEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDLAPIRVGHYCFFAAGS--VLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGAPAKMVGELPPSVVSTMKEKAQGRYRR 196 S YI T T N +SRKALI G Q + + G++I++ V IRGDL VG+ G +L +I PP Y PM IG +IG D+VI+AASIG+ XXXXXXXXXXXXX SG+P + +LP M+ K +G Y R Sbjct: 11 SAYIETDTGNKVSRKALISGSQNIILGGKTIIQHQVVIRGDLRRSGVGNSVVIGIGKFCLLGERSVIRPP-----------------YKTYKGVFSYYPMKIGDHVHIGSDSVIEAASIGNLXXXXXXXXXXXXXIIKDCVTIADNTIIPPGTVIASMSYYSGSPGQWQSDLPEGTPELMESKTKGYYAR 183
BLAST of NO19G01090 vs. NCBI_GenBank
Match: BAO52721.1 (gamma carbonic anhydrase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 65.1 bits (157), Expect = 3.100e-7 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0 Query: 4 ASSASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDL-APIRVGHYCFFAAGSVLSPCFI 72 +S + S+YIRTTT NYISR A + G V ++G+SIV+ +VTI GD AP+ +G YC+ G V++P + Sbjct: 3 SSQSESDYIRTTTQNYISRSANLLGASNVRIKGKSIVQPNVTIHGDYGAPVHIGRYCYIDEGVVIAPTVV 72
BLAST of NO19G01090 vs. NCBI_GenBank
Match: XP_002291806.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED90657.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 65.1 bits (157), Expect = 3.100e-7 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0 Query: 4 ASSASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDL-APIRVGHYCFFAAGSVLSPCFI 72 +S + S+YIRTTT NYISR A + G V ++G+SIV+ +VTI GD AP+ +G YC+ G V++P + Sbjct: 3 SSQSESDYIRTTTQNYISRSANLLGASNVRIKGKSIVQPNVTIHGDYGAPVHIGRYCYIDEGVVIAPTVV 72
BLAST of NO19G01090 vs. NCBI_GenBank
Match: OWZ63563.1 (hypothetical protein AYX15_04510 [Cryptococcus neoformans var. grubii] >OWZ69802.1 hypothetical protein AYX14_04787 [Cryptococcus neoformans var. grubii] >OXC64634.1 hypothetical protein AYX13_06061 [Cryptococcus neoformans var. grubii]) HSP 1 Score: 64.7 bits (156), Expect = 4.000e-7 Identity = 51/196 (26.02%), Postives = 73/196 (37.24%), Query Frame = 0 Query: 9 SEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDL--------APIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGAPAKMVGELPPSVVSTMKEKAQGRYRR 196 S YI T T N +SRKALI G + + G+SI++ +RGDL I VG YC G+V+ P P + + P+ I T+IGP+ +I+AA IGS G P +MV LP + TM+ + + Y+R Sbjct: 13 STYIETDTGNKVSRKALIAGATNIVLGGKSIIQTSSILRGDLRRSTAGQHVVISVGRYCLIGEGAVIRP-----PGKMYKGLVLTVRPSPIRLLIKQIRTFTFYPVRIADFTHIGPNCIIEAAQIGSCVEIGEGSIIGKFVVIKDLAVILPNTVLPEGTVVASMSVWGGNPGRMVDTLPETYQETMEARCKSYYQR 203
BLAST of NO19G01090 vs. NCBI_GenBank
Match: CBJ28813.1 (dynactin 4 [Ectocarpus siliculosus]) HSP 1 Score: 63.9 bits (154), Expect = 6.800e-7 Identity = 49/191 (25.65%), Postives = 73/191 (38.22%), Query Frame = 0 Query: 4 ASSASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDLAPIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGAPAKMVGELPPSVVSTMKEKAQGRY 194 A SA EY++T + + +KA + G + + GRSI+ V IRG+L IR+G YC G+V+ P + I + R+ P+++GS T IG V+++A IG + G PA+MV L S S E A Y Sbjct: 2 AGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEE-------------------SNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFY 173
BLAST of NO19G01090 vs. NCBI_GenBank
Match: CEQ40741.1 (SPOSA6832_02372 [Sporidiobolus salmonicolor]) HSP 1 Score: 63.9 bits (154), Expect = 6.800e-7 Identity = 64/207 (30.92%), Postives = 88/207 (42.51%), Query Frame = 0 Query: 4 ASSASSEYIRTTT-NYISRKALIEGPQYVEMRGRSIVEEDVTIRGDL--------------APIRVGHYCFFAAGSVLSPCFIIAPPQYEPXXXXXXXXXXXXXXXXXXXXXRYIPMTIGSMTNIGPDAVIQAASIGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGAPAKMVGELPPSVVSTMKEKAQGRYRR 196 ++S+ S YI T T N +SR + I G Q + + G+SI++ IRGDL +G YC G+VL PC+ Y PM IG +IGP +V++AASIG+XXXXXXXXXXX SG+PA+ +LP S ++ KA+ Y R Sbjct: 7 SASSKSSYIHTDTGNIVSRASTITGSQNIVLGGKSILQPGCIIRGDLRRSGXXXXXXXXXXXXXAMGKYCVVGEGTVLRPCY-----------------------KTYKGVFSYYPMKIGDYVSIGPGSVVEAASIGTXXXXXXXXXXXPLAILKDYSRIADGAVVGAGTIVPSLTEWSGSPARPTAQLPESTPELVEAKAKAFYSR 190 The following BLAST results are available for this feature:
BLAST of NO19G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01090 ID=NO19G01090|Name=NO19G01090|organism=Nannochloropsis oceanica|type=gene|length=4087bpback to top protein sequence of NO19G01090.1 >NO19G01090.1-protein ID=NO19G01090.1-protein|Name=NO19G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
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