NO19G01020, NO19G01020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01020 vs. NCBI_GenBank
Match: CBJ26696.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.1 bits (375), Expect = 2.300e-32 Identity = 84/197 (42.64%), Postives = 119/197 (60.41%), Query Frame = 0 Query: 63 FTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260 + + E+ Y+G WRSI++R +R P G+ S+D++ Q SVLVF W++ ++TTT+++EY PG +++ G V G E DKH AA ELEEEAHL G WY+L+++ A KYS+ F YLVVDP +G RG D+ E + RGV EVR +I G M+V + A+L+A+EKLRELG Sbjct: 80 YECISESPAYKG-WRSILRRRIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKD---------ERTVAGAGKYSTQVFYSYLVVDP--VVKGTPRGLDDGEFIEYIRGVSLEEVRAMIHSGDMSVTSGFAALMAIEKLRELG 264
BLAST of NO19G01020 vs. NCBI_GenBank
Match: CBJ27508.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.9 bits (359), Expect = 1.600e-30 Identity = 88/230 (38.26%), Postives = 125/230 (54.35%), Query Frame = 0 Query: 33 SFSRARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELGLLK 263 SF AR A G G P + DF +L Y G WR I+++ VR D ++ FD++ Q SV VF W++ ++T TLI+E+APG +V G VAG E +KH+ P AA ELEEEAHL+GG W++L E+ ADKYSS F +LVVDP + D+EE + + RGV E R++ G +++ ++ L+ KLR+LGLL+ Sbjct: 25 SFGTARHCAGFSSPVGEGKP-------QHDFKVLNRDLAYSG-WRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCED---------DETTINADKYSSNEFYCWLVVDP--YVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLGLLE 235
BLAST of NO19G01020 vs. NCBI_GenBank
Match: EJK57100.1 (hypothetical protein THAOC_22894 [Thalassiosira oceanica]) HSP 1 Score: 141.4 bits (355), Expect = 4.700e-30 Identity = 98/239 (41.00%), Postives = 127/239 (53.14%), Query Frame = 0 Query: 46 GDGGGPPGITPGLDKRD----FTLLKEADLYRGKWRSIMQRDVRYP--DGREVSFDIMDQPGS--SVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKH--EDPGH------AAVLELEEEAHLIGGRWYSLLEEG---------GXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260 G+GG P +D RD +T++ E Y G WR +++R V P + + FD++DQ S +V++FAWNSTS T T+I EY PG +V++G AG EDDKH E G AA ELEEE HL GG WY L +EG DKY T +LV+DPE E R D+EE +V+ GV ++ + IREG M + A ASLLALEKLR LG Sbjct: 19 GEGGRTPPTKLYVDGRDREHGYTIIDEQIRYSG-WRQVLRRRVSAPHLGDKHLDFDVIDQAKSCGAVVIFAWNSTSKTATIIREYMPGPHRVLSGLAAGIVEDDKHGIELDGRESLELIAARCELEEECHLAGGTWYRLTDEGVSSKNKLNSQFACSQAQMKSAVSMDKYVVTEITPWLVIDPEHVLE--PRPMDDEEDIVIISGVPTDDILKTIREGDMNIVGAFASLLALEKLRSLG 254
BLAST of NO19G01020 vs. NCBI_GenBank
Match: CEM38352.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 132.1 bits (331), Expect = 2.900e-27 Identity = 77/202 (38.12%), Postives = 109/202 (53.96%), Query Frame = 0 Query: 60 KRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELGLL 262 + F ++ E +Y+G W+++M R + P+G+ +DI +V V W++ TT EEY PG Q G VAG E KHE P HAA LELEEEAHL+GG+W +L+ E G +KYS F +L +DP ++ R D+ E++ +HR V V G TV + A+LLA+EKLRE+G L Sbjct: 34 REPFKVIGEQMVYQG-WKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLINERGVMDY----------EKYSDQIFYAFLCLDPVHTDD--PRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGEL 222
BLAST of NO19G01020 vs. NCBI_GenBank
Match: OEU08442.1 (hypothetical protein FRACYDRAFT_229133 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 129.0 bits (323), Expect = 2.400e-26 Identity = 80/205 (39.02%), Postives = 116/205 (56.59%), Query Frame = 0 Query: 59 DKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDI--MDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGH--AAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260 +K +F ++ E +Y G WR+I+QR VR + + V FD+ + S+VL+FAW++ S T TLI EY P S +++ G +A G ++KH++ AA ELEEE HL G+W LL + DKYS+T YLV+DPE+E+ + DEEE + + GV E+ R + G M + LLA+EKLRELG Sbjct: 44 NKNNFEIIDEKTVYSG-WRTIVQRKVRMRNNKVVDFDLVGVKTGDSAVLIFAWDTKSKTATLIREYMPASNRILWG-LAAGLVEEKHDNHNTELAARHELEEECHLKNGKWIPLLHQ------------PTAMDKYSTTTIQCYLVLDPEKED--NPKALDEEEDIEIIPGVTIPEILRWVNNGEMNLVGGFGCLLAIEKLRELG 232
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_002294477.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88311.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 127.1 bits (318), Expect = 9.200e-26 Identity = 83/220 (37.73%), Postives = 112/220 (50.91%), Query Frame = 0 Query: 64 TLLKEADLYRGKWRSIMQRDVRYP-------------DGREVSFDIMDQ---PGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKH--------EDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260 T++ + Y G WR +++R V P + + FD++DQ +V++FAWNSTS T T++ EY PG +V+ G AG E+ KH ED AA ELEEE HL GG+W+ L E G P DKY T YLV+DP R D+EE + + GV E+R++IREG M + +LLALEKLRE G Sbjct: 57 TIVNDEVRYSG-WRKVIRRTVSSPIRHHPHHYDTYDRQHKTIEFDVIDQNHDTNGAVIIFAWNSTSKTATIVREYMPGCHRVLGGLAAGLVENAKHASGDGEIEEDSLVAARFELEEECHLAGGKWFRLTENG----------VSIPMDKYVVTEITPYLVIDPHHVP--NPRPLDDEEDIEIITGVTVKEIRQMIREGDMNLVGCFGALLALEKLREFG 263
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_002178849.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49547.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 117.9 bits (294), Expect = 5.600e-23 Identity = 93/253 (36.76%), Postives = 118/253 (46.64%), Query Frame = 0 Query: 12 LLASATTFFLSSGSASPFPFSSFSRARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGS--SVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHE--DPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDE-EELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260 +LAS L+ GS SS S W G GG I P DF L+ + WR + R +R P GR V F+++ Q G+ +VLV AW+ + T TL+ EY P Q + G AG ED KH+ D AA EL EEA L GG W+ L E DKYS+T F +L +DP R RD EE L + GV E+R I +G +TV A AL KL+ELG Sbjct: 10 ILASVMALPLAVGS------SSSSTGWW-----GWHGG---AIIPVNQTLDFRLVGNETVLHQGWRVVTNRQIRMPSGRLVDFEVVGQRGTDQAVLVLAWHRATQTVTLVREYTPSVQQFMLGLPAGMVEDQKHDASDAWTAARAELLEEARLEGGIWHQLGER------------PTVMDKYSTTGFTVFLCIDPIAVAADRAPPRDAGEEGLEIITGVTVAELRTYIHDGNLTVVGGWAVQRALHKLKELG 236
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_002178850.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49548.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 116.7 bits (291), Expect = 1.200e-22 Identity = 86/233 (36.91%), Postives = 110/233 (47.21%), Query Frame = 0 Query: 32 SSFSRARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGS--SVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHE--DPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDE-EELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260 SS S W RG G I P DF L+ + WR + R +R P GR V F+++ Q G+ +V+V AW+ + T TL+ EY P + + G AG ED KH+ D AA EL EEA L GG WY L E DKYS+T F +L +DP R RD EE L + GV E+R I +G +TV A AL KL+ELG Sbjct: 9 SSSSSTGW----RGWHG---DAIIPVNQTLDFRLVGNETVLHQGWRVVTNRQIRMPSGRLVDFEVVGQRGTDQAVVVLAWHRATQTVTLVREYTPSVQRFMLGLPAGMVEDRKHDASDAWTAARAELLEEARLEGGIWYQLGER------------PTVMDKYSTTGFTVFLCIDPIAVAADRAPPRDAGEEGLEIISGVTVAELRTYIHDGNLTVVGGWAVQRALHKLKELG 222
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_003881243.1 (hypothetical protein NCLIV_042770 [Neospora caninum Liverpool] >CBZ51210.1 hypothetical protein NCLIV_042770 [Neospora caninum Liverpool] >CEL68524.1 TPA: hydrolase, NUDIX family protein [Neospora caninum Liverpool]) HSP 1 Score: 108.6 bits (270), Expect = 3.400e-20 Identity = 77/222 (34.68%), Postives = 108/222 (48.65%), Query Frame = 0 Query: 37 ARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLREL 259 AR LV G GGG P +L E +YRG WR++++R V++P+G+ V FD+ D P +VLV W S + T TL++EY PG + + G ++KH E EEEAHL GG L++ P KY+ F Y+V D ER + R D++EL++ G+ GE L GRMT ++L KLREL Sbjct: 9 ARVAELVSG--GGGLP------------ILSEKIVYRG-WRNVIKRTVQFPNGQPVVFDVTDAP-PAVLVLPWCSRTKTVTLLKEYCPGVNEKGMYTLVAGLYEEKHTSVEDCVRCETEEEAHLRGGELIPLMDS---------EDLSLPGAKYTGQKFLPYIVKDAERVSD--PRPMDDDELILPVHGITPGEAIWLAMHGRMTSTGCMMLFMSLHKLREL 203
BLAST of NO19G01020 vs. NCBI_GenBank
Match: PHJ22087.1 (nudix family protein [Cystoisospora suis]) HSP 1 Score: 101.3 bits (251), Expect = 5.400e-18 Identity = 67/197 (34.01%), Postives = 101/197 (51.27%), Query Frame = 0 Query: 65 LLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELGLL 262 +L + Y+G WR++++R V++P+G+ V+FDI P +VLV W S + T TL+ EY PG + G ++KH E EEEA L GGR ++ P KY++ F Y+V+D E+ + R D++E++ GV E LI GRMT ++ LLALEKLR++ L Sbjct: 24 VLSDVVAYKG-WRNVIKRTVQFPNGKPVTFDITTAP-PAVLVLPWCSQTRTLTLLREYCPGLNDKHMYTLVAGLFEEKHATIEDCIRWETEEEAQLRGGRLVPVMNS---------EDRTLPGAKYTAQKFIPYIVMDAEKVTDS--RPLDDDEIIQPVHGVSVNEALWLIMNGRMTSTSSMMVLLALEKLRQMDAL 207 The following BLAST results are available for this feature:
BLAST of NO19G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01020 ID=NO19G01020|Name=NO19G01020|organism=Nannochloropsis oceanica|type=gene|length=1298bpback to top protein sequence of NO19G01020.1 >NO19G01020.1-protein ID=NO19G01020.1-protein|Name=NO19G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bpback to top Synonyms
Publications
|