NO19G01020, NO19G01020 (gene) Nannochloropsis oceanica

Overview
NameNO19G01020
Unique NameNO19G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1298
Alignment locationchr19:345609..346906 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:345609..346906 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
Homology
BLAST of NO19G01020 vs. NCBI_GenBank
Match: CBJ26696.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 149.1 bits (375), Expect = 2.300e-32
Identity = 84/197 (42.64%), Postives = 119/197 (60.41%), Query Frame = 0
Query:   63 FTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260
            +  + E+  Y+G WRSI++R +R P G+  S+D++ Q   SVLVF W++ ++TTT+++EY PG  +++ G V G  E DKH     AA  ELEEEAHL  G WY+L+++               A KYS+  F  YLVVDP    +G  RG D+ E +   RGV   EVR +I  G M+V +  A+L+A+EKLRELG
Sbjct:   80 YECISESPAYKG-WRSILRRRIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKD---------ERTVAGAGKYSTQVFYSYLVVDP--VVKGTPRGLDDGEFIEYIRGVSLEEVRAMIHSGDMSVTSGFAALMAIEKLRELG 264          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: CBJ27508.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 142.9 bits (359), Expect = 1.600e-30
Identity = 88/230 (38.26%), Postives = 125/230 (54.35%), Query Frame = 0
Query:   33 SFSRARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELGLLK 263
            SF  AR  A      G G P       + DF +L     Y G WR I+++ VR  D ++  FD++ Q   SV VF W++ ++T TLI+E+APG  +V  G VAG  E +KH+ P  AA  ELEEEAHL+GG W++L E+               ADKYSS  F  +LVVDP        +  D+EE + + RGV   E  R++  G +++ ++   L+   KLR+LGLL+
Sbjct:   25 SFGTARHCAGFSSPVGEGKP-------QHDFKVLNRDLAYSG-WRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCED---------DETTINADKYSSNEFYCWLVVDP--YVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLGLLE 235          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: EJK57100.1 (hypothetical protein THAOC_22894 [Thalassiosira oceanica])

HSP 1 Score: 141.4 bits (355), Expect = 4.700e-30
Identity = 98/239 (41.00%), Postives = 127/239 (53.14%), Query Frame = 0
Query:   46 GDGGGPPGITPGLDKRD----FTLLKEADLYRGKWRSIMQRDVRYP--DGREVSFDIMDQPGS--SVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKH--EDPGH------AAVLELEEEAHLIGGRWYSLLEEG---------GXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260
            G+GG  P     +D RD    +T++ E   Y G WR +++R V  P    + + FD++DQ  S  +V++FAWNSTS T T+I EY PG  +V++G  AG  EDDKH  E  G       AA  ELEEE HL GG WY L +EG                        DKY  T    +LV+DPE   E   R  D+EE +V+  GV   ++ + IREG M +  A ASLLALEKLR LG
Sbjct:   19 GEGGRTPPTKLYVDGRDREHGYTIIDEQIRYSG-WRQVLRRRVSAPHLGDKHLDFDVIDQAKSCGAVVIFAWNSTSKTATIIREYMPGPHRVLSGLAAGIVEDDKHGIELDGRESLELIAARCELEEECHLAGGTWYRLTDEGVSSKNKLNSQFACSQAQMKSAVSMDKYVVTEITPWLVIDPEHVLE--PRPMDDEEDIVIISGVPTDDILKTIREGDMNIVGAFASLLALEKLRSLG 254          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: CEM38352.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 132.1 bits (331), Expect = 2.900e-27
Identity = 77/202 (38.12%), Postives = 109/202 (53.96%), Query Frame = 0
Query:   60 KRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELGLL 262
            +  F ++ E  +Y+G W+++M R +  P+G+   +DI      +V V  W++   TT   EEY PG  Q   G VAG  E  KHE P HAA LELEEEAHL+GG+W +L+ E G              +KYS   F  +L +DP   ++   R  D+ E++ +HR V    V      G  TV  + A+LLA+EKLRE+G L
Sbjct:   34 REPFKVIGEQMVYQG-WKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLINERGVMDY----------EKYSDQIFYAFLCLDPVHTDD--PRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGEL 222          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: OEU08442.1 (hypothetical protein FRACYDRAFT_229133 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 129.0 bits (323), Expect = 2.400e-26
Identity = 80/205 (39.02%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   59 DKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDI--MDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGH--AAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260
            +K +F ++ E  +Y G WR+I+QR VR  + + V FD+  +    S+VL+FAW++ S T TLI EY P S +++ G +A G  ++KH++     AA  ELEEE HL  G+W  LL +                DKYS+T    YLV+DPE+E+    +  DEEE + +  GV   E+ R +  G M +      LLA+EKLRELG
Sbjct:   44 NKNNFEIIDEKTVYSG-WRTIVQRKVRMRNNKVVDFDLVGVKTGDSAVLIFAWDTKSKTATLIREYMPASNRILWG-LAAGLVEEKHDNHNTELAARHELEEECHLKNGKWIPLLHQ------------PTAMDKYSTTTIQCYLVLDPEKED--NPKALDEEEDIEIIPGVTIPEILRWVNNGEMNLVGGFGCLLAIEKLRELG 232          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_002294477.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88311.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 127.1 bits (318), Expect = 9.200e-26
Identity = 83/220 (37.73%), Postives = 112/220 (50.91%), Query Frame = 0
Query:   64 TLLKEADLYRGKWRSIMQRDVRYP-------------DGREVSFDIMDQ---PGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKH--------EDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260
            T++ +   Y G WR +++R V  P               + + FD++DQ      +V++FAWNSTS T T++ EY PG  +V+ G  AG  E+ KH        ED   AA  ELEEE HL GG+W+ L E G             P DKY  T    YLV+DP        R  D+EE + +  GV   E+R++IREG M +     +LLALEKLRE G
Sbjct:   57 TIVNDEVRYSG-WRKVIRRTVSSPIRHHPHHYDTYDRQHKTIEFDVIDQNHDTNGAVIIFAWNSTSKTATIVREYMPGCHRVLGGLAAGLVENAKHASGDGEIEEDSLVAARFELEEECHLAGGKWFRLTENG----------VSIPMDKYVVTEITPYLVIDPHHVP--NPRPLDDEEDIEIITGVTVKEIRQMIREGDMNLVGCFGALLALEKLREFG 263          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_002178849.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49547.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 117.9 bits (294), Expect = 5.600e-23
Identity = 93/253 (36.76%), Postives = 118/253 (46.64%), Query Frame = 0
Query:   12 LLASATTFFLSSGSASPFPFSSFSRARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGS--SVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHE--DPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDE-EELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260
            +LAS     L+ GS      SS S   W     G  GG    I P     DF L+    +    WR +  R +R P GR V F+++ Q G+  +VLV AW+  + T TL+ EY P   Q + G  AG  ED KH+  D   AA  EL EEA L GG W+ L E                 DKYS+T F  +L +DP      R   RD  EE L +  GV   E+R  I +G +TV    A   AL KL+ELG
Sbjct:   10 ILASVMALPLAVGS------SSSSTGWW-----GWHGG---AIIPVNQTLDFRLVGNETVLHQGWRVVTNRQIRMPSGRLVDFEVVGQRGTDQAVLVLAWHRATQTVTLVREYTPSVQQFMLGLPAGMVEDQKHDASDAWTAARAELLEEARLEGGIWHQLGER------------PTVMDKYSTTGFTVFLCIDPIAVAADRAPPRDAGEEGLEIITGVTVAELRTYIHDGNLTVVGGWAVQRALHKLKELG 236          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_002178850.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49548.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 116.7 bits (291), Expect = 1.200e-22
Identity = 86/233 (36.91%), Postives = 110/233 (47.21%), Query Frame = 0
Query:   32 SSFSRARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGS--SVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHE--DPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDE-EELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELG 260
            SS S   W    RG  G     I P     DF L+    +    WR +  R +R P GR V F+++ Q G+  +V+V AW+  + T TL+ EY P   + + G  AG  ED KH+  D   AA  EL EEA L GG WY L E                 DKYS+T F  +L +DP      R   RD  EE L +  GV   E+R  I +G +TV    A   AL KL+ELG
Sbjct:    9 SSSSSTGW----RGWHG---DAIIPVNQTLDFRLVGNETVLHQGWRVVTNRQIRMPSGRLVDFEVVGQRGTDQAVVVLAWHRATQTVTLVREYTPSVQRFMLGLPAGMVEDRKHDASDAWTAARAELLEEARLEGGIWYQLGER------------PTVMDKYSTTGFTVFLCIDPIAVAADRAPPRDAGEEGLEIISGVTVAELRTYIHDGNLTVVGGWAVQRALHKLKELG 222          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: XP_003881243.1 (hypothetical protein NCLIV_042770 [Neospora caninum Liverpool] >CBZ51210.1 hypothetical protein NCLIV_042770 [Neospora caninum Liverpool] >CEL68524.1 TPA: hydrolase, NUDIX family protein [Neospora caninum Liverpool])

HSP 1 Score: 108.6 bits (270), Expect = 3.400e-20
Identity = 77/222 (34.68%), Postives = 108/222 (48.65%), Query Frame = 0
Query:   37 ARWVALVRGGDGGGPPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLREL 259
            AR   LV G  GGG P            +L E  +YRG WR++++R V++P+G+ V FD+ D P  +VLV  W S + T TL++EY PG  +     +  G  ++KH         E EEEAHL GG    L++               P  KY+   F  Y+V D ER  +   R  D++EL++   G+  GE   L   GRMT        ++L KLREL
Sbjct:    9 ARVAELVSG--GGGLP------------ILSEKIVYRG-WRNVIKRTVQFPNGQPVVFDVTDAP-PAVLVLPWCSRTKTVTLLKEYCPGVNEKGMYTLVAGLYEEKHTSVEDCVRCETEEEAHLRGGELIPLMDS---------EDLSLPGAKYTGQKFLPYIVKDAERVSD--PRPMDDDELILPVHGITPGEAIWLAMHGRMTSTGCMMLFMSLHKLREL 203          
BLAST of NO19G01020 vs. NCBI_GenBank
Match: PHJ22087.1 (nudix family protein [Cystoisospora suis])

HSP 1 Score: 101.3 bits (251), Expect = 5.400e-18
Identity = 67/197 (34.01%), Postives = 101/197 (51.27%), Query Frame = 0
Query:   65 LLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQPGSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAAVLELEEEAHLIGGRWYSLLEEGGXXXXXXXXXXXXPADKYSSTFFNFYLVVDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLLALEKLRELGLL 262
            +L +   Y+G WR++++R V++P+G+ V+FDI   P  +VLV  W S + T TL+ EY PG        +  G  ++KH         E EEEA L GGR   ++                P  KY++  F  Y+V+D E+  +   R  D++E++    GV   E   LI  GRMT  ++   LLALEKLR++  L
Sbjct:   24 VLSDVVAYKG-WRNVIKRTVQFPNGKPVTFDITTAP-PAVLVLPWCSQTRTLTLLREYCPGLNDKHMYTLVAGLFEEKHATIEDCIRWETEEEAQLRGGRLVPVMNS---------EDRTLPGAKYTAQKFIPYIVMDAEKVTDS--RPLDDDEIIQPVHGVSVNEALWLIMNGRMTSTSSMMVLLALEKLRQMDAL 207          
The following BLAST results are available for this feature:
BLAST of NO19G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ26696.12.300e-3242.64conserved unknown protein [Ectocarpus siliculosus][more]
CBJ27508.11.600e-3038.26conserved unknown protein [Ectocarpus siliculosus][more]
EJK57100.14.700e-3041.00hypothetical protein THAOC_22894 [Thalassiosira oc... [more]
CEM38352.12.900e-2738.12unnamed protein product [Vitrella brassicaformis C... [more]
OEU08442.12.400e-2639.02hypothetical protein FRACYDRAFT_229133 [Fragilario... [more]
XP_002294477.19.200e-2637.73predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002178849.15.600e-2336.76predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002178850.11.200e-2236.91predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_003881243.13.400e-2034.68hypothetical protein NCLIV_042770 [Neospora caninu... [more]
PHJ22087.15.400e-1834.01nudix family protein [Cystoisospora suis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004434NSK004434Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01020.1NO19G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01020.1NO19G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01020 ID=NO19G01020|Name=NO19G01020|organism=Nannochloropsis oceanica|type=gene|length=1298bp
ATGCCATCCCATTTCAGCCGCTTAAGCCTCCTTCTCCTCGCCTCAGCGAC
AACCTTCTTCTTGTCTTCTGGCTCTGCCTCTCCATTCCCCTTCTCTTCAT
TCTCAAGGGCTCGGTGGGTTGCGCTTGTCCGTGGCGGTGATGGTGGCGGC
CCTCCCGGCATCACGCCGGGCTTGGACAAGAGGGACTTTACATTGCTGAA
AGAAGCAGATCTCTACCGTGGAAAGTGgtacgtaagtatgagataggaca
aaaaagagatatgagaaaagaaatgtttgtgctatagcaaggaggaatgc
ctactcatagcctcccctccctgtctacctgcctccctcctccctcgctc
tgtcccctcccactttgacctccctttctctttccccctcctcccttcat
tcacaagGCGTTCGATCATGCAACGCGATGTGCGTTACCCCGATGGTCGT
GAGGTTTCCTTCGACATCATGGATCAGCCTGGGAGTAGCGTGCTGGTGTT
TGCATGGAATAGCACCAGCCATACCACGACTTTAATTGAGGAATACGCAC
CTGGATCGTTGCAGgtaggattatttcgattgaaatcgatgctattctcg
atattgttacgattagattgcgtatgtatgcttcttgatgagggtctcct
cctgtgggtatgaaagcgcggggatgcagtgtctcggggtggtgctgtga
gacacacaatatcacactaactctctcgtctcgcatcctccctccctgct
tcactttcctctttcattcgcccacgcagGTGATTACTGGTCCTGTGGCG
GGTGGGTGTGAGGACGACAAACACGAGGACCCCGGGCACGCGGCCGTGCT
GGAGCTGGAAGAAGAAGCGCATTTAATAGGAGGAAGATGGTACTCGCTCC
TGGAGGAGGGAGGGCGGGAGGGAGGGAGGGAGGGAGGGGTACAGGGAGCA
CCTGCAGATAAATATAGTAGCACCTTCTTCAACTTCTATTTGGTCGTAGA
TCCGGAGAGGGAGGAGGAGGGGAGGGTGCGGGGAAGGGATGAGGAGGAAC
TGCTTGTTGTGCATCGCGGGGTTGGAGAGGGGGAGGTACGGAGGTTGATA
CGGGAGGGAAGGATGACGGTCCCTGCTGCCTGCGCCTCTTTGTTGGCATT
GGAGAAACTACGGGAATTGGGGTTGTTGAAGGCGGGGGAAGGGAGGGAGG
AAGGGAGGGAGAGGGCGGGAGGGGAGGAGGAGAAGAAGAAGAAGAAGGAG
GCGTGGATGTCAACGGTCAGGGGGGGGGACAGGGAGGGAGGGAGGTAG
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protein sequence of NO19G01020.1

>NO19G01020.1-protein ID=NO19G01020.1-protein|Name=NO19G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bp
MPSHFSRLSLLLLASATTFFLSSGSASPFPFSSFSRARWVALVRGGDGGG
PPGITPGLDKRDFTLLKEADLYRGKWRSIMQRDVRYPDGREVSFDIMDQP
GSSVLVFAWNSTSHTTTLIEEYAPGSLQVITGPVAGGCEDDKHEDPGHAA
VLELEEEAHLIGGRWYSLLEEGGREGGREGGVQGAPADKYSSTFFNFYLV
VDPEREEEGRVRGRDEEELLVVHRGVGEGEVRRLIREGRMTVPAACASLL
ALEKLRELGLLKAGEGREEGRERAGGEEEKKKKKEAWMSTVRGGDREGGR
*
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Synonyms
Publications