NO19G00900, NO19G00900 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G00900 vs. NCBI_GenBank
Match: EWM23593.1 (nuclear y ccaat-box binding factor c subunit nf yc [Nannochloropsis gaditana]) HSP 1 Score: 231.1 bits (588), Expect = 7.500e-57 Identity = 136/241 (56.43%), Postives = 168/241 (69.71%), Query Frame = 0
Query: 189 SDRFLLSQTLKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRD--RRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKASGKKKTLKADDVTAAMRRYGPFCFLRPDFPMGG--XXXXXXXXXXXXXXXXXXXXXXXXNMNAIAKLAAADRRKMKERAWE 426
+DR L + AKSAWML+T+EAR LK+ QPSL+VTEQ+KIMSEQWK+L AR+PFL+RAAADKERY+ +K LR + + +GG E RD R L++EMLFPLARIR++MKLDPEVKT+SKEAA+LV KATELFLD++GEE+HKASG+++TLK++DV AAMRR G F FLRPDFPMGG MNAIAKLAAAD+R+ +ER E
Sbjct: 153 ADRILSAAKPVPAKSAWMLFTAEARELLKEEQPSLRVTEQVKIMSEQWKTLDDEARRPFLERAAADKERYQEEK-------LRWEGNQVAKAVPKGGKESRRDVEAGRGLADEMLFPLARIRKIMKLDPEVKTVSKEAALLVGKATELFLDMIGEESHKASGRRRTLKSEDVAAAMRRQGKFAFLRPDFPMGGKSNTGKEGGSGMSKRGEGGNLEGKAGKMNAIAKLAAADKRRQEEREKE 386
BLAST of NO19G00900 vs. NCBI_GenBank
Match: XP_009825578.1 (hypothetical protein H257_03268 [Aphanomyces astaci] >ETV85560.1 hypothetical protein H257_03268 [Aphanomyces astaci]) HSP 1 Score: 86.7 bits (213), Expect = 2.300e-13 Identity = 62/182 (34.07%), Postives = 93/182 (51.10%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEML-FPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
L + SA+ + + RA + P L + KI+S +W LS A++PF AAADKERY +DKQ + +G R E +L P AR++R+M DP+V +SK++ + V KATELF+ L + H ++ K+KT+K DV A+ + +LR DFP
Sbjct: 69 LAKPLSAYFHFLAANRAIVVAENPGLGIGPVQKILSTKWNELSAEAKEPFTTMAAADKERYLNDKQSLMD---------------QGIDIEAAPRVPRNDESLLTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFP 235
BLAST of NO19G00900 vs. NCBI_GenBank
Match: GAX28190.1 (hypothetical protein FisN_35Lh046 [Fistulifera solaris]) HSP 1 Score: 83.6 bits (205), Expect = 1.900e-12 Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPD 375
+K+A++A+ ++ E R L+K + V K++++ W SLS + ++ + D+A A++E+ + Q + +A + A H + + ++FP ARIR++ KLDPEVK +SKEA +LV KA EL L LG E K + ++ L DDV F FLR D
Sbjct: 118 VKKARTAYFIFAEEKRPELQKQNTGVGVAGMAKLIAQLWNSLSADEKKIYQDKATAEREQVAKEMQAWKDAGGVVEEPTAATHTSDPNA-------------LIFPAARIRKICKLDPEVKNLSKEALLLVCKAAELALSQLGRETVKVAQIQNRRKLIPDDVATVCNTREQFLFLRED 283
BLAST of NO19G00900 vs. NCBI_GenBank
Match: XP_008876230.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >XP_008876231.1 hypothetical protein H310_11353 [Aphanomyces invadans] >ETV95055.1 hypothetical protein H310_11353 [Aphanomyces invadans] >ETV95056.1 hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 83.2 bits (204), Expect = 2.500e-12 Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 0
Query: 195 SQTLKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAEL---REKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
S+ L + SA+ + +E RAA+ P L + KI+S +W L ++P++ +A DK+RY +KQ + + T+RAK + P AR++R+M+ DP+V +SKEA + + KATE F+ L + H ++ K+KT+K DV A+ + +LR DFP
Sbjct: 96 SKKLSKPLSAYFHFLAENRAAVIAENPGLGIGPVQKILSTKWNELDAVEKEPYVAKATEDKQRYMKEKQALVDRGIDVDAPSTKRAKSSD---------------DHVLTLPNARVKRIMQTDPDVHKVSKEAVLAITKATEQFIQFLTTKGHDSAVMAKRKTVKNSDVLQAIHSHPTLDWLRDDFP 267
BLAST of NO19G00900 vs. NCBI_GenBank
Match: GAX16342.1 (hypothetical protein FisN_35Hh046 [Fistulifera solaris]) HSP 1 Score: 82.0 bits (201), Expect = 5.600e-12 Identity = 58/179 (32.40%), Postives = 92/179 (51.40%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPD 375
+K+A++A+ ++ E R L+K + V K++ + W SLS + ++ + D+A A++E+ + Q + +A + A H + + + FP ARIR++ KLDPEVK +SKEA +LV KA EL L LG E K + ++ L DDV F FLR D
Sbjct: 108 VKRARTAYFIFAEEKRPELQKQNTGVGVAGMAKLIGQLWNSLSADEKKIYQDKATAEREQVAKEMQAWKDAGGVVEEPTAANHTSDPNA-------------LTFPAARIRKICKLDPEVKNLSKEALLLVCKAAELALSQLGRETVKVAQIQNRRKLVPDDVATVCNTREQFLFLRED 273
BLAST of NO19G00900 vs. NCBI_GenBank
Match: XP_009516749.1 (hypothetical protein PHYSODRAFT_309820 [Phytophthora sojae] >EGZ29474.1 hypothetical protein PHYSODRAFT_309820 [Phytophthora sojae]) HSP 1 Score: 81.6 bits (200), Expect = 7.300e-12 Identity = 55/181 (30.39%), Postives = 99/181 (54.70%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
+K+ +S+++L+ +E R + P ++ + KI+S QWK L ++ ++ AA DKERY+ + + + E +EG R S ++PL R+R++++ DP+V ISK+A + +AKA+ELF LG ++++ + K+ +KA DVT ++ +LR DFP
Sbjct: 4 VKKPQSSYLLFCNERRKQVMDENPGARIGDIQKIISAQWKELKPEEKEVYVQLAAKDKERYQQELLDNPQID------------AEPTAEG---RAAHDSNACIYPLGRVRKIVQSDPDVGKISKDALIAIAKASELFAQFLGTKSYEQALYRNKRQVKASDVTRTIQTTASLDWLREDFP 169
BLAST of NO19G00900 vs. NCBI_GenBank
Match: OQS03233.1 (hypothetical protein THRCLA_04475 [Thraustotheca clavata]) HSP 1 Score: 80.5 bits (197), Expect = 1.600e-11 Identity = 55/177 (31.07%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 202 KSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
+SA+ + ++ R +K P+ + KI+ WK LS ++P++ +A DKERY K++ L E+ + K E SE + +L PLAR++R+++ DP+V ISK+A +++ KATE F+ L + ++ K+KT+K D+ + +G +LR DFP
Sbjct: 52 QSAYFHFLADKRPQVKAENPNATIGALQKILGTLWKELSAEDKEPYIQKALLDKERYAKAKER-----LLERGIDIEPEKPEVASE----------DILLLPLARVKRIIQADPDVGKISKDALIVITKATEQFIQYLAAKGQDSAMISKRKTIKDSDLLQVIHGHGSLDWLRDDFP 213
BLAST of NO19G00900 vs. NCBI_GenBank
Match: XP_008913557.1 (hypothetical protein PPTG_17634 [Phytophthora parasitica INRA-310] >ETI34754.1 hypothetical protein F443_18818 [Phytophthora parasitica P1569] >ETK75051.1 hypothetical protein L915_18286 [Phytophthora parasitica] >ETL28472.1 hypothetical protein L916_18195 [Phytophthora parasitica] >ETL81727.1 hypothetical protein L917_18010 [Phytophthora parasitica] >ETM34933.1 hypothetical protein L914_18093 [Phytophthora parasitica] >ETN01230.1 hypothetical protein PPTG_17634 [Phytophthora parasitica INRA-310] >ETP04605.1 hypothetical protein F441_18670 [Phytophthora parasitica CJ01A1] >KUF87899.1 WRKY transcription factor 19 [Phytophthora nicotianae]) HSP 1 Score: 80.1 bits (196), Expect = 2.100e-11 Identity = 54/181 (29.83%), Postives = 99/181 (54.70%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
+K+ +S+++++ +E R + P ++ + KI+S QWK L + +++ AA DK RY E EL + + + E D+ + S ++PL R+RR+++ DP+V +SK+A + +AKA+ELF LG ++++ + K+ +KA DVT ++ +LR DFP
Sbjct: 4 VKKPQSSYLIFCNERRKQVMDENPGTRIGDIQKIISAQWKELKPEEKDVYVELAAKDKARY--------EQELLDNPQVNEEPTAE-------DKAAQDSNACIYPLGRVRRIVQSDPDVGKVSKDALIAIAKASELFAQFLGTKSYEQALYRNKRQIKASDVTRTIQTTASLDWLREDFP 169
BLAST of NO19G00900 vs. NCBI_GenBank
Match: ETO63507.1 (hypothetical protein F444_18804 [Phytophthora parasitica P1976] >ETP32742.1 hypothetical protein F442_18629 [Phytophthora parasitica P10297]) HSP 1 Score: 79.0 bits (193), Expect = 4.800e-11 Identity = 53/181 (29.28%), Postives = 99/181 (54.70%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
+K+ +S+++++ +E R + P ++ + KI+S QWK L + +++ AA DK RY E EL + + + E D+ + S ++PL R+R++++ DP+V +SK+A + +AKA+ELF LG ++++ + K+ +KA DVT ++ +LR DFP
Sbjct: 4 VKKPQSSYLIFCNERRKQVMDENPGTRIGDIQKIISAQWKELKPEEKDVYVELAAKDKARY--------EQELLDNPQVNEEPTAE-------DKAAQDSNACIYPLGRVRKIVQSDPDVGKVSKDALIAIAKASELFAQFLGTKSYEQALYRNKRQIKASDVTRTIQTTASLDWLREDFP 169
BLAST of NO19G00900 vs. NCBI_GenBank
Match: GAX98176.1 (Hypothetical protein PINS_006050 [Pythium insidiosum]) HSP 1 Score: 78.2 bits (191), Expect = 8.100e-11 Identity = 52/181 (28.73%), Postives = 94/181 (51.93%), Query Frame = 0
Query: 198 LKQAKSAWMLYTSEARAALKKAQPSLKVTEQLKIMSEQWKSLSRNARQPFLDRAAADKERYRHDKQQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMKLDPEVKTISKEAAMLVAKATELFLDLLGEEAHKAS--GKKKTLKADDVTAAMRRYGPFCFLRPDFP 377
+K+ +SA+ +++ E R + A P L+V + K+++ +WK L+ + +LD AA DKERY R ++ + E+ L+PL R++R ++ DP+V +S+EA + ++KA+ELF L ++++ + K+ +KA DV A+ +LR DFP
Sbjct: 4 VKKPRSAYFIFSGEKRKEITDANPGLRVGDVQKLITARWKELTPEEKXVYLDLAAKDKERY----------------ERERLENPVXDAPADVVAPVEVEHACLYPLGRVKRXIQSDPDVNKVSREALVAISKASELFAQYLATKSYEQTLFNNKRQVKASDVARAIHTTPVLDWLRDDFP 168 The following BLAST results are available for this feature:
BLAST of NO19G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G00900 ID=NO19G00900|Name=NO19G00900|organism=Nannochloropsis oceanica|type=gene|length=2138bpback to top protein sequence of NO19G00900.1 >NO19G00900.1-protein ID=NO19G00900.1-protein|Name=NO19G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bpback to top protein sequence of NO19G00900.2 >NO19G00900.2-protein ID=NO19G00900.2-protein|Name=NO19G00900.2|organism=Nannochloropsis oceanica|type=polypeptide|length=362bpback to top Synonyms
Publications
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