NO18G02650, NO18G02650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G02650 vs. NCBI_GenBank
Match: EWM23475.1 (hypothetical protein Naga_101028g2 [Nannochloropsis gaditana]) HSP 1 Score: 270.8 bits (691), Expect = 4.500e-69 Identity = 156/243 (64.20%), Postives = 177/243 (72.84%), Query Frame = 0 Query: 29 MSVNPCPAGAPPTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPVSCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQEG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYMDPNDPSRVLVNAPMATASYADPMNQASAPPSGGYASYS 264 MS NPCPA APP+WYPGE L+ + D V+F+LSLGRL P Q+ ATCKAKG LHLTNIRLLFIA KPT SPVP GPEF+SFDVPLRGIVDVKFNQPIFGANNLQGKV PVSCL A++PV+WKA F+AGGT VLIP+LLRLMDQLH+E XXXXXXXXXXXXXXX GYMDP+DPSRVLV+AP+ATA+Y +PM ASAPP +S++ Sbjct: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGXXXXXXXXXXXXXXXWYGGEGTLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPVATATYTNPMPHASAPPPSSGSSFN 243
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_005854651.1 (arabinogalactan protein [Nannochloropsis gaditana CCMP526] >EKU21708.1 arabinogalactan protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 248.8 bits (634), Expect = 1.800e-62 Identity = 144/219 (65.75%), Postives = 160/219 (73.06%), Query Frame = 0 Query: 29 MSVNPCPAGAPPTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPVSCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQEG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYMDPNDPSRVLVNAPM 240 MS NPCPA APP+WYPGE L+ + D V+F+LSLGRL P Q+ ATCKAKG LHLTNIRLLFIA KPT SPVP GPEF+SFDVPLRGIVDVKFNQPIFGANNLQGKV PVSCL A++PV+WKA F+AGGT VLIP+LLRLMDQLH+E XXXXXXXXXXXXXXX GYMDP+DPSRVLV+AP+ Sbjct: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHREAQGQAIPAQQLRTPQQQPHHGXXXXXXXXXXXXXXXWYGGEGNLPVAQAVAPGVEGGGYMDPSDPSRVLVDAPV 219
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_005854652.1 (arabinogalactan protein [Nannochloropsis gaditana CCMP526] >EKU21709.1 arabinogalactan protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 244.6 bits (623), Expect = 3.500e-61 Identity = 115/145 (79.31%), Postives = 128/145 (88.28%), Query Frame = 0 Query: 29 MSVNPCPAGAPPTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPVSCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQE 174 MS NPCPA APP+WYPGE L+ + D V+F+LSLGRL P Q+ ATCKAKG LHLTNIRLLFIA KPT SPVP GPEF+SFDVPLRGIVDVKFNQPIFGANNLQGKV PVSCL A++PV+WKA F+AGGT VLIP+LLRLMDQLH+E Sbjct: 1 MSFNPCPASAPPSWYPGEGLLVTADNVEFSLSLGRLPPRQSKATCKAKGRLHLTNIRLLFIATKPTASPVPGGPEFASFDVPLRGIVDVKFNQPIFGANNLQGKVTPVSCLEASAPVEWKAAFIAGGTTVLIPTLLRLMDQLHRE 145
BLAST of NO18G02650 vs. NCBI_GenBank
Match: OWZ03920.1 (Arabinogalactan protein [Phytophthora megakarya]) HSP 1 Score: 82.8 bits (203), Expect = 1.800e-12 Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 0 Query: 71 ATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPVSCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQEG 175 A K KG ++ T R++F+A K NG F +F++PL + D KFNQPIFGA ++ G V P + + WK F GGT V++P LRLM++ ++G Sbjct: 42 AVFKGKGRIYCTTQRIIFVAEK---GITQNGCYFEAFEIPLVKMTDEKFNQPIFGACSISGLVAPSGSIEGSGNFSWKITFANGGTGVVLPVFLRLMEKRKKKG 142
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_022932704.1 (uncharacterized protein LOC111439171 [Cucurbita moschata] >XP_023539771.1 uncharacterized protein LOC111800356 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.0 bits (201), Expect = 3.000e-12 Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 0 Query: 40 PTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPV----SCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQ 173 P + E V + DGV+F + P T KAKGT++L+N+R++F+++KP P F++FD+PL + D KFNQPIF NN+ G V PV S +K F GG +P L+ + Q Sbjct: 13 PVPFTNELFVLARDGVEFVID---KIPGANTDRVKAKGTIYLSNVRMVFVSSKP-------DPWFTAFDMPLLFVHDEKFNQPIFFCNNISGLVEPVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQ 139
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_022972085.1 (uncharacterized protein LOC111470726 [Cucurbita maxima]) HSP 1 Score: 82.0 bits (201), Expect = 3.000e-12 Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 0 Query: 40 PTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPV----SCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQ 173 P + E V + DGV+F + P T KAKGT++L+N+R++F+++KP P F++FD+PL + D KFNQPIF NN+ G V PV S +K F GG +P L+ + Q Sbjct: 13 PVPFTNELFVLARDGVEFVID---KIPGANTDRVKAKGTIYLSNVRMVFVSSKP-------DPWFTAFDMPLLFVHDEKFNQPIFFCNNISGLVEPVVPDDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQ 139
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_006844782.1 (UPF0664 stress-induced protein C29B12.11c [Amborella trichopoda] >ERN06457.1 hypothetical protein AMTR_s00016p00259850 [Amborella trichopoda]) HSP 1 Score: 81.6 bits (200), Expect = 3.900e-12 Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 0 Query: 32 NPCPAGAPPTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPV----SCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQ 173 +P P + E + S DGV+F + P+ KAKGT++L+N+R+LF+A KP +F +FD+PL + D KFNQPIF NN+ G V PV SP +K F GG +P L+ + Q Sbjct: 5 SPLLPNGMPVPFENEMFILSRDGVEFEID---KIPTAPGGKIKAKGTIYLSNVRMLFVAKKPV-------GDFRAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSPHSFKILFKEGGCGTFVPLFFNLIASVKQ 139
BLAST of NO18G02650 vs. NCBI_GenBank
Match: KMZ74790.1 (hypothetical protein ZOSMA_122G00580 [Zostera marina]) HSP 1 Score: 80.9 bits (198), Expect = 6.700e-12 Identity = 54/150 (36.00%), Postives = 77/150 (51.33%), Query Frame = 0 Query: 29 MSVNP--CPAGAPPTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPV----SCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQ 173 M+VNP G P + GE LV + +GV+F + P KAKGT++++N+R++F+A KP + F++FD+PL I + KFNQPIF NN+ G V PV S +K F GG IP L L+ + Q Sbjct: 1 MTVNPQLLSHGGMPVPFVGEILVLNRNGVEFEVD---KIPGADGGKMKAKGTIYISNVRMVFVADKPVGN-------FTAFDMPLLYIHEEKFNQPIFFCNNITGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFIPLFLNLIASVRQ 140
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_012207802.1 (hypothetical protein SPRG_12501 [Saprolegnia parasitica CBS 223.65] >KDO21457.1 hypothetical protein SPRG_12501 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 80.5 bits (197), Expect = 8.700e-12 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 0 Query: 74 KAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPVSC--LGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQEG 175 KA G +++T RL+F A K + +G F +F++PL I D KFNQP+FG+ N+ G V PV A+P++W+ F GGT +P LRLM+ G Sbjct: 43 KASGRIYITTQRLVFCADK---AATQHGRFFQAFEIPLDNIADDKFNQPMFGSCNISGDVFPVGTDEGDVATPIEWRVSFPNGGTGTFLPIFLRLMEHKKHAG 142
BLAST of NO18G02650 vs. NCBI_GenBank
Match: XP_022152415.1 (UPF0664 stress-induced protein C29B12.11c [Momordica charantia]) HSP 1 Score: 80.5 bits (197), Expect = 8.700e-12 Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 0 Query: 29 MSVNP--CPAGAPPTWYPGECLVSSTDGVDFTLSLGRLSPSQATATCKAKGTLHLTNIRLLFIAAKPTRSPVPNGPEFSSFDVPLRGIVDVKFNQPIFGANNLQGKVMPV----SCLGAASPVDWKARFLAGGTDVLIPSLLRLMDQLHQ 173 M++NP P G P + E V + DGV+F + P + KAKGT++L+N+R++F+A+KP S F +FD+PL + D KFNQPIF NN+ G V PV S +K F GG +P L+ + Q Sbjct: 1 MALNPNLFPNGMPVP-FTNELFVLARDGVEFEVD---KIPGANSGRVKAKGTIYLSNVRMVFVASKPDAS-------FIAFDMPLLFVHDEKFNQPIFHCNNISGFVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQ 139 The following BLAST results are available for this feature:
BLAST of NO18G02650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02650 ID=NO18G02650|Name=NO18G02650|organism=Nannochloropsis oceanica|type=gene|length=1542bpback to top protein sequence of NO18G02650.1 >NO18G02650.1-protein ID=NO18G02650.1-protein|Name=NO18G02650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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