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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr18 | genome | chr18:849170..857211 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO18G02620 vs. NCBI_GenBank
Match: EWM23468.1 (hypothetical protein Naga_100651g4 [Nannochloropsis gaditana]) HSP 1 Score: 317.8 bits (813), Expect = 1.100e-82 Identity = 177/206 (85.92%), Postives = 184/206 (89.32%), Query Frame = 0
Query: 669 MEKAGDMFAHVAPNVTDIAPVLYQGQTPPRKLEMIYSRYCQHALVEDASGQGNDKAVRIQELFDISNKKAEKISTKILSSQDNLMKMLEKQFGAGGEGMGDMGAELEKMFEQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFKQALNR 875
MEKAGD+F HVAPNVT+I+PVLYQGQ PPRKLEMIYSRYCQ+ALVEDASGQGNDKAVRIQELFDISNKKAEKIS+KILSSQDN+MKMLEKQFGAGGEGMG+MGAELEKMFE FG XXXXXXXXX TLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFKQALNR
Sbjct: 1 MEKAGDIFMHVAPNVTEISPVLYQGQAPPRKLEMIYSRYCQYALVEDASGQGNDKAVRIQELFDISNKKAEKISSKILSSQDNMMKMLEKQFGAGGEGMGEMGAELEKMFESFG--GMPDXXXXXXXXXGAPGAMPQKEMQETLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFKQALNR 204
BLAST of NO18G02620 vs. NCBI_GenBank
Match: CEM13719.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 95.9 bits (237), Expect = 6.600e-16 Identity = 75/265 (28.30%), Postives = 127/265 (47.92%), Query Frame = 0
Query: 614 LLAARDAAKLTAGEAADAFAEAVNVAVVKIVDELVPTLKGSEAQTLNGVDALLKFMEKAGDMFAHVAPNVTDIAPVLYQGQTPPRKLEMIYSRYCQHALVEDASGQGNDKAVRIQELFDISNKKAEKISTKILSSQ--------DNLMKMLEKQFGAGGEGMGDMGAELEKMFEQFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTL-EALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFK 870
L A + LT +AA+++AEAV+V + ++V+ V LK TL +DAL +M+ A +F H A NV +I PV+Y G+ P +LE +Y RY L + + + K +++ +F IS +KA+++S + S+ +LMK++ GEG GD ++++ E G L ++ V+ G L+EQD E +R+A K+ G D + + + E+ PE +E + K
Sbjct: 317 LRALQRELNLTDADAAESYAEAVSVQLARLVENAVDALKIEGNTTLAAMDALTAYMDSAAHLFMHFASNV-NITPVVYSGRAPRNRLESLYLRYTLACLDGNDEDRDDTKVDQLRVIFGISERKAQQLSEQAWRSRMQAQMPGAGDLMKLM------SGEGGGDFNKLMQQLQEGGGLEGLGDDDAESLEALAKLTKDFDWRQVEPLMREIQEVMTSGELTEQDKENMREAWKATGADFGQI---PDEMLRELSPEQREFFETMK 571
BLAST of NO18G02620 vs. NCBI_GenBank
Match: EWM23473.1 (hypothetical protein Naga_100428g1 [Nannochloropsis gaditana]) HSP 1 Score: 84.7 bits (208), Expect = 1.500e-12 Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query: 149 KAASPFLYGIVDESAPLRLGAALLRGAAERFWAVSEQFDMMHGTLDKMAR 199
KAASPFLYG++DES PL+LGAAL+RG AERFW VSE+FD++ +LDKMAR
Sbjct: 126 KAASPFLYGMIDESTPLKLGAALMRGVAERFWVVSERFDVLQASLDKMAR 175
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02620 ID=NO18G02620|Name=NO18G02620|organism=Nannochloropsis oceanica|type=gene|length=8042bp
TGCTGTCCTTTTGACCTCATCTGTCAATGTGTAAAATCGGATAAGGGGAT
CAGCCACATTAAATTCAAAAAAAGTAACAAGTTGTAGTCGAGTGCACGTG
TGCAGAGGAACAGGTGTCGGATGACATTATCGCCAACTTATTCGAGAGGG
GTTTCCTCAACACCACCCAAAAACCCAAACGCCATACCGCCAGCCCACGC
CCTAACCTAGGCTGACAATCTGCGGTCGTGTCATTCTACGTGCTCAGCAG
GGCACATGCGCGTGCTCTAGGTGCGGACACGCGAATGTGGGGCAGGAGGT
TTCCACCGCCTTCCTTCCCTTGCCTCCTTATGTTGCTCTGCTTCAGTCCA
TTCCCGCCCACACCAGACGCACGGATAAATGTACCATGCCCCATTTACAC
TACCGTACACTAGTAGACGACACAAAGGAGGATATGAAAGGATCTCAATT
GCCTTTGGTTCGGGAATGAGACGAGGCTCTGGTGTTATCTCCTGCCCTTA
TTCAAAAGTTGGCGCCTCGCAACAAAGTCTGTTCTTCCATGCGACCCCTC
CACACCAGACTCCCAACATTTGATTTCCATTTCCATACCACACAAATACT
TAATAGTAAACGACGACCATGACGGTCAGGACGCGCAGCGGTGGCGGAAA
CGGCCGGCGCGAGACGAGGgtgagtgatatgattgttcggctatgtgatc
tgcctccttctcttgagccatgatgactcatcctttatcctgtagGTCAC
CCTCCTTCTTGGCTTGCTGGCCTTTGCCTCTCTTTCTCCCATCGTGCACC
CTTTTGACCTCCGCCTTCGCATGGCGGCTTCTCACAAGAAAGGGGGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCGCTCTCGCGGCCTC
GAAAGGAGGGAGTGTGTCAGTGGGGGCCTCGTCGGGCGGGGCGGGTGGGA
GGATCGGGGGAAGCTTGTTAAAATCTTTGAACAGCATCCAGCGgtaggtt
ttggagggaaaaagggaagaagggaggggtggatgaagaagggtatttgt
ggcgcctgggggggttacgaaacgctttccatacaggtctagctggctgc
gtttcagaggtggatgtatgggtgtatgggtgcatggatgtgtatgccct
tctaccctttcgcgtcagtaccatcactttccccctttatctcccatttc
aacaacgaagcagCTCTTCCTCCTCTTCCTCCTCTTCCTCCTTCGCCCTC
GGCTCCTGGCGACACGCCCTCATCCAGTCGCCCTCCTCCTCCTCGTCCTC
CCCGTCCTCTTCGTCCTCTTCCTCCTCATCCTCCTCTTCCTCCTCCTCAC
TGACCATCAAAGCCGCCTCCCCCTTCCTGTATGGAATCGTGGACGAAAGC
GCGCCTCTGCGCTTGGGAGCAGCGCTACTCCGAGGGGCGGCGGAGAGGTT
CTGGGCAGTATCTGAGCAGTTTGACATGATGCACGGCACGCTTGACAAGA
TGGCCAGgtaggtttgtagagaaggagaggagggagagagggaaggaggg
aaggggagatcgtcgatttgcccatctgcccgtgctttttgcttacgtca
cgcaacccctccctcccttcctcccctccctatctacccctccctccctc
cgttcttcccctccctccctccatcttcttcctttctcccccccatcctc
ccctccttccttcccactccagGCTGCTAGCCTTCCTGTGGCTGCGGGCG
GTCGAGCGAGTCTTTGACCCGGCCCTGGACCATTTCGGGCACCCCATGAT
GGAGGCAGTGgtgcgccctccctccctccctccctccctccctccctccc
tccctccctccctcccttccttcctccctccctccctctccccctctcca
ttccaccgatggagcccttggccccgagtatcaagggaagggaaagtgaa
ctgtccctcgatttcagagagggggataacgcgcttcctgcccctgcttg
actccccccctcccaccctccctctctctctcttcttgcatcagGTGGAG
CCGTTGGTAGTTGAACCCCTGGGAATGTTGAAACGGACAGTTCGCCGTTT
CCTCCGACGGGGACGCCGCTCCCTGGCCCTCGCCTCCGCGGGCATCGCAG
TCGGTATAGCGGGAGGCGGGGGAGGGAGCATTTTGGCGCGAGCAGCAATG
GGGAGGAAAGgtagggaggggagtgaaggggagggaggggacggatggga
gggagggaaggaggaaagcagggaggaagaaaacagatagttacatgcat
aggatggtgggctaattacaccctccttccctccctctctccctccctcc
ctccctccctccctctcatttctgctgcttccttgggcgctcctaccccc
atcccgggcccatcactcatgtcttcctcccttcatccctaccttgttcc
ctccctcccttcctccctcccagCCGCCTCCACAGCCGCCCCCACCCCAA
CTCCGGTCTCTGTCCGACGTGACGTTACGCCCGTAGCCTCCGTGCTCGGC
CGAGGAGGAGGGAGAGGAAAGGAAGCTGTGGAAGAGAAAGTGgtaagtac
aaacgcaattagacaggcaagagggaggggtggggatgaggcttagggag
ccccaggccgacacttccacttgactgggccgttgaaaatagcggctcag
cgaccgttggcctcgaatatcaatgtctgcctgtctgtctttgtttaatt
atttatttgctgtgaaccctcttcgtgtgtggggatgaggatgggggtat
gaataaagggaacgtcagtgctttgtgtcttcatgaccggctcgagtggt
gtaggtgcgctcttaccctcctcccctccctcccaccctccctccctccc
tcctcgtcccctgtcagTCCCCTGCCACCGGGAAGAAGCTGGTGCGGAAG
CGGAAGAAGAGCGTGGTTCTACAGAAGACGCAGGTCCGTCAGGAGGACGG
CAGCCTCGTCACCAAGATCAAAGGCGTCATTGTCGATAGTCCCCCAAAGg
tacgcctgccctccctccctccctccctccctctcccccctccctggcct
cactcaaacacggccgcagcatcgtctgatttacaagggagattgccaga
agccccttcctccctcccttcctccctccctccctcgtccttctcctgcc
gcattgtgaagctctcttcgactcacctctccctccctccctccctccct
cccttcctccccaagGCCGTTGCCGTGGGCGCCGTGGCTGCGGGCGGGCT
GGCGTACGTGTACAAGAAGAAGAAGGAGAAGGACGAGCTCTGGTCGCACC
TCGACGACGAGTGGTACTACCAGGAGGAAGAgtaagcatcccctccctcc
ctccccctccctccctcccccctcctttcctccctccttccctccctcct
ttcccctcctgtcttcttccattccctaagctgtaggtttttccttctga
tttcccttccctcatttcccctcctgtcttcctccaatcccttgagtgcg
tccttttgacccacccaccctccctccctccctccctccctccctctccc
tttctttcgcgcaaaagTATCCCCAAGGCCCGTCATCTCGCAAAGTCCGG
CCATCTCTCCGACATCAAAgtacgccctcttcccccccttccctccctcc
ctccctccctccctcccactccgtctccctccctctttcgccccacccca
cccccctctcctccccccctccctccctccctcagGTCGGCGACATCGAG
CAAGCCGTGGCCGAGGGGCGGGCGGGCTCCAAAGGCTCTAAGAAAGATCC
CAAGTTCAGGAAGGTGATCAAACCAGAACAGgtatctccctccccctctc
cctgcccccctcccttcctccctccctccctccctccttccctcccttct
atctacctgtctttccctgtctgctctccaacgaaccctccctccttgcc
tccctccttgcctccctccctcagGTCATCCAGAAGGAGTACAAGGAAGA
GAAGAAATCCATCTTTACACTCTTCCAGAAGCCCAAGCgtacgtagggga
ggaaagaaaagagggaggaagggagggagggagggagggagggaaggaag
agaaaaaggaggcgtggtgccacggggtttcatgtggaccgaacgccgac
tcgtccctccctccctccctccttccctcctccctcccttggacccatgc
cctgtcatccgaccacctacactgccaccgacacactctgcctccctccc
tccctccctccctcccttcccccctccctccctccctccctccccccctc
ccttcctccctggcagCCACCCGGATGACGAGCGAGGAGGAGTTGATGTT
TGTCGGTCTGGACGCAGAGCGGAAGGAAGGACCTTTCCTGATTGCCTCGG
CCATTGgtagggagggagggagggagggagggagggaggggggagtactg
cttcgctcgatgagcacattcatttatgcaactgactcaatccctccctc
cctccctctccctccctccctccctcccctcctagCACTTTCTCACGTGG
CCCCCGTGCCTTTCCTGACAGCCGCGCTCCTGGAGAAGGAGGAGGTGATG
GGGAAAATCGTCATGGACGCCGCAGAGTTCACGgtaagaaggaaggaagg
agggagggagggagggagggagagagggagggagggagggaaggagggag
ggagtatgacggattagcccttatcttctgacgatgccctctttggatgt
actcttaatctatccctccacacaccgacagCAGGAGGAGAAGGAGGTGG
AAGAAGAGAAGAAGGAGGAGGAGGCTGCTGCTATTGCTGCGTCTGACCCC
ATGGCGAGGGCAGCGGAGGAAGGGAAGGACGGCGAGGTCAAGGCTGAGTC
TGTCGCGGCTCCTGCTGCTGGTGCTGCTGCTGCTATTGCTGCTGCTGGAG
AGGAGGAGAAGAAAGAGGAGACAACAGCCGCTCCAAGGAAAGgtgagtga
agaagggagagacaagtaggctcaggaaaggaaatgctcaaactcatctc
cctccctccctccctccctagCCCGCTACCCCTCCCTCCTCGCTGCACGG
GATGCCGCCAAGCTGACAGCTGGCGAGGCAGCTGACGCTTTTGCCGAGGC
CGTTAACGTGGCCGTCGTGAAGATCGTGGACGAGCTGGTGCCCACCCTGA
AAGgcatgtcccttccctccctccctccctccctccctccctccctccat
cccttattggttcagcttgtgtaggcatcctcatcctgacacacactttc
ccctccctccctccctccctgcagGCAGCGAGGCCCAGACATTGAACGGA
GTGGATGCCTTGCTAAAGTTCATGGAGAAAGCCGGAGACATGTTCGCGCA
Tgtacgaaggaaggggagggagggagggaggagggagggagggaaacgag
gaagaagcctggaaaaaccgagacgcgtcttcctttcatggatcttatcc
cctccctccctcccgccctccctccctccctccctcagGTGGCGCCGAAT
GTGACGGACATCGCCCCAGTGCTGTACCAGGGGCAGACCCCGCCCCGCAA
GCTGGAGATGATCTACTCGCGgtaggtgccgggggagggagggaggcggg
cgttggtgtcgttccctgtcatggcatgacggcctcgtcaaacgatttgt
ttggcagagctggcggcccgtggcgacctctctaaccctcccctccctcc
ctccctccctccctccctccctccccccttacctagCTACTGCCAGCACG
CTCTGGTGGAGGACGCCTCCGGGCAGGGCAACGACAAGGCTGTCCGCATT
CAGGAGCTCTTCGACATTTCCAACAAGAAGGCCGAGAAAATCAGCACCAA
AATCCTCAGgtacccccttcctccctccctccctccctccctccctccct
ccctccctccacagctctcagattattctgatggaagcttccccccctct
ccgtccttgtctccctcaatctcctctcctcctttcacagctcctcagat
atcgtcgtggaagtttcaacccttctcaccccccccttctctctcccttc
ctccctccctccctccctccctccctccctccctccctagCTCCCAGGAC
AATCTGATGAAGATGCTCGAGAAGCAGTTTGGAGCCGGTGGGGAGGGCAT
GGGCGATATGGGTGCTGgtagggagggagggagggagggagggaggaagg
gaggaaggaaggaaggaaggaagagagagatatatctagtcgtctgcaat
gcctctctgcaaggcccagttttttcacctccctccctccctccctccct
cgctccctctctccctccctcctttcctcaccccttccccattcacagAG
CTGGAGAAGATGTTCGAGCAGTTTGGAGGCATGCCGGGAGGAGGAGGAGG
GGGAGGGATGGGGGGAGGAGGGGCAGGGCCGGGGGCGATGCCGCAGAAGG
AGATGGAGgtgagggagggagggagggagggagggagggagggagggagg
gggggagggaggagtagattgtagatgtttttttgtgggtccatttttga
attggaagggaggagggagggggggagggaaggatgggggaaggacagaa
aagatactcatttgttgtcgtgcttggttgttgtgaccgcacacacaccc
catcgaagactcacatgttgttgtagctgctgttgatgttgtcgcggttg
ttgtaatcgtcattgtgaccacacacttacacacacttcacagGAGACGC
TCGAGGCCCTCAAGGCCGTGGTGCAGCAAGGCGGGCTGTCGGAACAAGAC
ATGGAGgtgagggagggagggaaggggggagggtcaccatcatctgcgct
ctcctcggaggcttttcggaggataggagggagggagagaaggaaggaag
gaagaacacccactaacctctttcatttaatccacaatcaactaatttat
agGAGCTCCGCCAAGCCTGCAAGTCGCAGGGCGTGGACCTGGAAGACCTT
GTCCGTACAATGGAAGgtagggagggagggaaggagggagggagcgagag
ggggagagggggagggatagcatcgattactagaacgagtcagcgatact
ccatgtcacacacacctgcgctcacgccttttcctccttccttcctccct
ccctccctccctccctcccttctagGCCTGTCGGCGGAAATGCCGCCCGA
AAGCCAGGAGCTGACGAAGATGTTCAAGCAGGCCTTGAACCGCAGTTAGG
GAGGGAAGGAAGGAAGGATGAAGGGAAGGAAGCAGGGAGGGAGAGTAGAG
AGCCCTCTTTCTCTTTCTTCTTTGGCAAGAAGTGTCGGTAGGAAGGGAGA
AAAAGGAGATAAGAACTGTCGGTTTATTTGGGTGGGACAGAGGGATTAAG
AGGTCTTGTTCAGTCGAAGGATTTCATTTGTTATTATGCACACGGATTTG
GAAGGGCAGGAGGGAGGGTAGCAGGTATTTGTTGTTTGTTGTGAGCTTGT
TGGGTCGGGGTGGTGCGCGCTGGTAGTGGTGTTTGTTTAAGAGAGAAAGC
GCAGCAGACAGCAGCGAGAGCAAGACAAGGAGAAAGGAAAGAAGGAGGAC
AAGAAGAAATTCATAGAGCAATCAAGAGAGATGAACAGAGTGGACGAGAG
CGAGGGAAACGGGAGAGAGTTTGAGAGAGAGAGAGATGACATTAAAAAAG
CAAACGGTAAATGGCAAATAAAAGGGAGGAGGGGAGAGAGGTGGGGAGGG
GGGGCAAGACGAGAAAAGTCACATTACGGATATAAGACAAAGCGAAAGGA
AAGATGCTAGTACTAACAAGAGAAAAGAAGAAGAGGAGAAGAGAAAGAAG
AAAAAGAAGAAGAACTTGGTCCAATTTCCCACCATTCTCCCACGCATGGC
CAAAAAGTATAGGTACGTAAACAATTCTAGCTTTTGCCGGCA back to topprotein sequence of NO18G02620.1 >NO18G02620.1-protein ID=NO18G02620.1-protein|Name=NO18G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=876bp
MTVRTRSGGGNGRRETRVTLLLGLLAFASLSPIVHPFDLRLRMAASHKKG
GSSSSSSSSSSSSTALAASKGGSVSVGASSGGAGGRIGGSLLKSLNSIQR
SSSSSSSSSFALGSWRHALIQSPSSSSSSPSSSSSSSSSSSSSSSLTIKA
ASPFLYGIVDESAPLRLGAALLRGAAERFWAVSEQFDMMHGTLDKMARLL
AFLWLRAVERVFDPALDHFGHPMMEAVVEPLVVEPLGMLKRTVRRFLRRG
RRSLALASAGIAVGIAGGGGGSILARAAMGRKAASTAAPTPTPVSVRRDV
TPVASVLGRGGGRGKEAVEEKVSPATGKKLVRKRKKSVVLQKTQVRQEDG
SLVTKIKGVIVDSPPKAVAVGAVAAGGLAYVYKKKKEKDELWSHLDDEWY
YQEEDIPKARHLAKSGHLSDIKVGDIEQAVAEGRAGSKGSKKDPKFRKVI
KPEQVIQKEYKEEKKSIFTLFQKPKPTRMTSEEELMFVGLDAERKEGPFL
IASAIALSHVAPVPFLTAALLEKEEVMGKIVMDAAEFTQEEKEVEEEKKE
EEAAAIAASDPMARAAEEGKDGEVKAESVAAPAAGAAAAIAAAGEEEKKE
ETTAAPRKARYPSLLAARDAAKLTAGEAADAFAEAVNVAVVKIVDELVPT
LKGSEAQTLNGVDALLKFMEKAGDMFAHVAPNVTDIAPVLYQGQTPPRKL
EMIYSRYCQHALVEDASGQGNDKAVRIQELFDISNKKAEKISTKILSSQD
NLMKMLEKQFGAGGEGMGDMGAELEKMFEQFGGMPGGGGGGGMGGGGAGP
GAMPQKEMEETLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTM
EGLSAEMPPESQELTKMFKQALNRS* back to top
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