NO18G02620.1, NO18G02620.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO18G02620.1
Unique NameNO18G02620.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3939
Alignment locationchr18:849170..857211 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr18genomechr18:849170..857211 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO18G02620.1 vs.
Match: EWM23468.1 (hypothetical protein Naga_100651g4 [Nannochloropsis gaditana])

HSP 1 Score: 349.0 bits (894), Expect = 4.300e-92
Identity = 185/206 (89.81%), Postives = 193/206 (93.69%), Query Frame = 0
Query:  669 MEKAGDMFAHVAPNVTDIAPVLYQGQTPPRKLEMIYSRYCQHALVEDASGQGNDKAVRIQELFDISNKKAEKISTKILSSQDNLMKMLEKQFGAGGEGMGDMGAELEKMFEQFGGMPGGGGGGGMGGGGAGPGAMPQKEMEETLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFKQALNR 875
            MEKAGD+F HVAPNVT+I+PVLYQGQ PPRKLEMIYSRYCQ+ALVEDASGQGNDKAVRIQELFDISNKKAEKIS+KILSSQDN+MKMLEKQFGAGGEGMG+MGAELEKMFE FGGMP  G    MG G   PGAMPQKEM+ETLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFKQALNR
Sbjct:    1 MEKAGDIFMHVAPNVTEISPVLYQGQAPPRKLEMIYSRYCQYALVEDASGQGNDKAVRIQELFDISNKKAEKISSKILSSQDNMMKMLEKQFGAGGEGMGEMGAELEKMFESFGGMPDMGSMPDMGAG--APGAMPQKEMQETLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTMEGLSAEMPPESQELTKMFKQALNR 204          
The following BLAST results are available for this feature:
BLAST of NO18G02620.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM23468.14.300e-9289.81hypothetical protein Naga_100651g4 [Nannochloropsi... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO18G02620NO18G02620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO18G02620.1NO18G02620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO18G02620.1.cds1NO18G02620.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds2NO18G02620.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds3NO18G02620.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds4NO18G02620.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds5NO18G02620.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds6NO18G02620.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds7NO18G02620.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds8NO18G02620.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds9NO18G02620.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds10NO18G02620.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds11NO18G02620.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds12NO18G02620.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds13NO18G02620.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds14NO18G02620.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds15NO18G02620.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds16NO18G02620.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds17NO18G02620.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds18NO18G02620.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds19NO18G02620.1.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds20NO18G02620.1.cds20Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds21NO18G02620.1.cds21Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds22NO18G02620.1.cds22Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO18G02620.1.cds23NO18G02620.1.cds23Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO18G02620.1 ID=NO18G02620.1|Name=NO18G02620.1|organism=Nannochloropsis oceanica|type=mRNA|length=3939bp
TGCTGTCCTTTTGACCTCATCTGTCAATGTGTAAAATCGGATAAGGGGAT
CAGCCACATTAAATTCAAAAAAAGTAACAAGTTGTAGTCGAGTGCACGTG
TGCAGAGGAACAGGTGTCGGATGACATTATCGCCAACTTATTCGAGAGGG
GTTTCCTCAACACCACCCAAAAACCCAAACGCCATACCGCCAGCCCACGC
CCTAACCTAGGCTGACAATCTGCGGTCGTGTCATTCTACGTGCTCAGCAG
GGCACATGCGCGTGCTCTAGGTGCGGACACGCGAATGTGGGGCAGGAGGT
TTCCACCGCCTTCCTTCCCTTGCCTCCTTATGTTGCTCTGCTTCAGTCCA
TTCCCGCCCACACCAGACGCACGGATAAATGTACCATGCCCCATTTACAC
TACCGTACACTAGTAGACGACACAAAGGAGGATATGAAAGGATCTCAATT
GCCTTTGGTTCGGGAATGAGACGAGGCTCTGGTGTTATCTCCTGCCCTTA
TTCAAAAGTTGGCGCCTCGCAACAAAGTCTGTTCTTCCATGCGACCCCTC
CACACCAGACTCCCAACATTTGATTTCCATTTCCATACCACACAAATACT
TAATAGTAAACGACGACCATGACGGTCAGGACGCGCAGCGGTGGCGGAAA
CGGCCGGCGCGAGACGAGGGTCACCCTCCTTCTTGGCTTGCTGGCCTTTG
CCTCTCTTTCTCCCATCGTGCACCCTTTTGACCTCCGCCTTCGCATGGCG
GCTTCTCACAAGAAAGGGGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCACCGCTCTCGCGGCCTCGAAAGGAGGGAGTGTGTCAGTGGGGG
CCTCGTCGGGCGGGGCGGGTGGGAGGATCGGGGGAAGCTTGTTAAAATCT
TTGAACAGCATCCAGCGCTCTTCCTCCTCTTCCTCCTCTTCCTCCTTCGC
CCTCGGCTCCTGGCGACACGCCCTCATCCAGTCGCCCTCCTCCTCCTCGT
CCTCCCCGTCCTCTTCGTCCTCTTCCTCCTCATCCTCCTCTTCCTCCTCC
TCACTGACCATCAAAGCCGCCTCCCCCTTCCTGTATGGAATCGTGGACGA
AAGCGCGCCTCTGCGCTTGGGAGCAGCGCTACTCCGAGGGGCGGCGGAGA
GGTTCTGGGCAGTATCTGAGCAGTTTGACATGATGCACGGCACGCTTGAC
AAGATGGCCAGGCTGCTAGCCTTCCTGTGGCTGCGGGCGGTCGAGCGAGT
CTTTGACCCGGCCCTGGACCATTTCGGGCACCCCATGATGGAGGCAGTGG
TGGAGCCGTTGGTAGTTGAACCCCTGGGAATGTTGAAACGGACAGTTCGC
CGTTTCCTCCGACGGGGACGCCGCTCCCTGGCCCTCGCCTCCGCGGGCAT
CGCAGTCGGTATAGCGGGAGGCGGGGGAGGGAGCATTTTGGCGCGAGCAG
CAATGGGGAGGAAAGCCGCCTCCACAGCCGCCCCCACCCCAACTCCGGTC
TCTGTCCGACGTGACGTTACGCCCGTAGCCTCCGTGCTCGGCCGAGGAGG
AGGGAGAGGAAAGGAAGCTGTGGAAGAGAAAGTGTCCCCTGCCACCGGGA
AGAAGCTGGTGCGGAAGCGGAAGAAGAGCGTGGTTCTACAGAAGACGCAG
GTCCGTCAGGAGGACGGCAGCCTCGTCACCAAGATCAAAGGCGTCATTGT
CGATAGTCCCCCAAAGGCCGTTGCCGTGGGCGCCGTGGCTGCGGGCGGGC
TGGCGTACGTGTACAAGAAGAAGAAGGAGAAGGACGAGCTCTGGTCGCAC
CTCGACGACGAGTGGTACTACCAGGAGGAAGATATCCCCAAGGCCCGTCA
TCTCGCAAAGTCCGGCCATCTCTCCGACATCAAAGTCGGCGACATCGAGC
AAGCCGTGGCCGAGGGGCGGGCGGGCTCCAAAGGCTCTAAGAAAGATCCC
AAGTTCAGGAAGGTGATCAAACCAGAACAGGTCATCCAGAAGGAGTACAA
GGAAGAGAAGAAATCCATCTTTACACTCTTCCAGAAGCCCAAGCCCACCC
GGATGACGAGCGAGGAGGAGTTGATGTTTGTCGGTCTGGACGCAGAGCGG
AAGGAAGGACCTTTCCTGATTGCCTCGGCCATTGCACTTTCTCACGTGGC
CCCCGTGCCTTTCCTGACAGCCGCGCTCCTGGAGAAGGAGGAGGTGATGG
GGAAAATCGTCATGGACGCCGCAGAGTTCACGCAGGAGGAGAAGGAGGTG
GAAGAAGAGAAGAAGGAGGAGGAGGCTGCTGCTATTGCTGCGTCTGACCC
CATGGCGAGGGCAGCGGAGGAAGGGAAGGACGGCGAGGTCAAGGCTGAGT
CTGTCGCGGCTCCTGCTGCTGGTGCTGCTGCTGCTATTGCTGCTGCTGGA
GAGGAGGAGAAGAAAGAGGAGACAACAGCCGCTCCAAGGAAAGCCCGCTA
CCCCTCCCTCCTCGCTGCACGGGATGCCGCCAAGCTGACAGCTGGCGAGG
CAGCTGACGCTTTTGCCGAGGCCGTTAACGTGGCCGTCGTGAAGATCGTG
GACGAGCTGGTGCCCACCCTGAAAGGCAGCGAGGCCCAGACATTGAACGG
AGTGGATGCCTTGCTAAAGTTCATGGAGAAAGCCGGAGACATGTTCGCGC
ATGTGGCGCCGAATGTGACGGACATCGCCCCAGTGCTGTACCAGGGGCAG
ACCCCGCCCCGCAAGCTGGAGATGATCTACTCGCGCTACTGCCAGCACGC
TCTGGTGGAGGACGCCTCCGGGCAGGGCAACGACAAGGCTGTCCGCATTC
AGGAGCTCTTCGACATTTCCAACAAGAAGGCCGAGAAAATCAGCACCAAA
ATCCTCAGCTCCCAGGACAATCTGATGAAGATGCTCGAGAAGCAGTTTGG
AGCCGGTGGGGAGGGCATGGGCGATATGGGTGCTGAGCTGGAGAAGATGT
TCGAGCAGTTTGGAGGCATGCCGGGAGGAGGAGGAGGGGGAGGGATGGGG
GGAGGAGGGGCAGGGCCGGGGGCGATGCCGCAGAAGGAGATGGAGGAGAC
GCTCGAGGCCCTCAAGGCCGTGGTGCAGCAAGGCGGGCTGTCGGAACAAG
ACATGGAGGAGCTCCGCCAAGCCTGCAAGTCGCAGGGCGTGGACCTGGAA
GACCTTGTCCGTACAATGGAAGGCCTGTCGGCGGAAATGCCGCCCGAAAG
CCAGGAGCTGACGAAGATGTTCAAGCAGGCCTTGAACCGCAGTTAGGGAG
GGAAGGAAGGAAGGATGAAGGGAAGGAAGCAGGGAGGGAGAGTAGAGAGC
CCTCTTTCTCTTTCTTCTTTGGCAAGAAGTGTCGGTAGGAAGGGAGAAAA
AGGAGATAAGAACTGTCGGTTTATTTGGGTGGGACAGAGGGATTAAGAGG
TCTTGTTCAGTCGAAGGATTTCATTTGTTATTATGCACACGGATTTGGAA
GGGCAGGAGGGAGGGTAGCAGGTATTTGTTGTTTGTTGTGAGCTTGTTGG
GTCGGGGTGGTGCGCGCTGGTAGTGGTGTTTGTTTAAGAGAGAAAGCGCA
GCAGACAGCAGCGAGAGCAAGACAAGGAGAAAGGAAAGAAGGAGGACAAG
AAGAAATTCATAGAGCAATCAAGAGAGATGAACAGAGTGGACGAGAGCGA
GGGAAACGGGAGAGAGTTTGAGAGAGAGAGAGATGACATTAAAAAAGCAA
ACGGTAAATGGCAAATAAAAGGGAGGAGGGGAGAGAGGTGGGGAGGGGGG
GCAAGACGAGAAAAGTCACATTACGGATATAAGACAAAGCGAAAGGAAAG
ATGCTAGTACTAACAAGAGAAAAGAAGAAGAGGAGAAGAGAAAGAAGAAA
AAGAAGAAGAACTTGGTCCAATTTCCCACCATTCTCCCACGCATGGCCAA
AAAGTATAGGTACGTAAACAATTCTAGCTTTTGCCGGCA
back to top

protein sequence of NO18G02620.1

>NO18G02620.1-protein ID=NO18G02620.1-protein|Name=NO18G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=876bp
MTVRTRSGGGNGRRETRVTLLLGLLAFASLSPIVHPFDLRLRMAASHKKG
GSSSSSSSSSSSSTALAASKGGSVSVGASSGGAGGRIGGSLLKSLNSIQR
SSSSSSSSSFALGSWRHALIQSPSSSSSSPSSSSSSSSSSSSSSSLTIKA
ASPFLYGIVDESAPLRLGAALLRGAAERFWAVSEQFDMMHGTLDKMARLL
AFLWLRAVERVFDPALDHFGHPMMEAVVEPLVVEPLGMLKRTVRRFLRRG
RRSLALASAGIAVGIAGGGGGSILARAAMGRKAASTAAPTPTPVSVRRDV
TPVASVLGRGGGRGKEAVEEKVSPATGKKLVRKRKKSVVLQKTQVRQEDG
SLVTKIKGVIVDSPPKAVAVGAVAAGGLAYVYKKKKEKDELWSHLDDEWY
YQEEDIPKARHLAKSGHLSDIKVGDIEQAVAEGRAGSKGSKKDPKFRKVI
KPEQVIQKEYKEEKKSIFTLFQKPKPTRMTSEEELMFVGLDAERKEGPFL
IASAIALSHVAPVPFLTAALLEKEEVMGKIVMDAAEFTQEEKEVEEEKKE
EEAAAIAASDPMARAAEEGKDGEVKAESVAAPAAGAAAAIAAAGEEEKKE
ETTAAPRKARYPSLLAARDAAKLTAGEAADAFAEAVNVAVVKIVDELVPT
LKGSEAQTLNGVDALLKFMEKAGDMFAHVAPNVTDIAPVLYQGQTPPRKL
EMIYSRYCQHALVEDASGQGNDKAVRIQELFDISNKKAEKISTKILSSQD
NLMKMLEKQFGAGGEGMGDMGAELEKMFEQFGGMPGGGGGGGMGGGGAGP
GAMPQKEMEETLEALKAVVQQGGLSEQDMEELRQACKSQGVDLEDLVRTM
EGLSAEMPPESQELTKMFKQALNRS*
back to top

mRNA from alignment at chr18:849170..857211+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO18G02620.1 ID=NO18G02620.1|Name=NO18G02620.1|organism=Nannochloropsis oceanica|type=mRNA|length=8042bp|location=Sequence derived from alignment at chr18:849170..857211+ (Nannochloropsis oceanica)
TGCTGTCCTTTTGACCTCATCTGTCAATGTGTAAAATCGGATAAGGGGAT CAGCCACATTAAATTCAAAAAAAGTAACAAGTTGTAGTCGAGTGCACGTG TGCAGAGGAACAGGTGTCGGATGACATTATCGCCAACTTATTCGAGAGGG GTTTCCTCAACACCACCCAAAAACCCAAACGCCATACCGCCAGCCCACGC CCTAACCTAGGCTGACAATCTGCGGTCGTGTCATTCTACGTGCTCAGCAG GGCACATGCGCGTGCTCTAGGTGCGGACACGCGAATGTGGGGCAGGAGGT TTCCACCGCCTTCCTTCCCTTGCCTCCTTATGTTGCTCTGCTTCAGTCCA TTCCCGCCCACACCAGACGCACGGATAAATGTACCATGCCCCATTTACAC TACCGTACACTAGTAGACGACACAAAGGAGGATATGAAAGGATCTCAATT GCCTTTGGTTCGGGAATGAGACGAGGCTCTGGTGTTATCTCCTGCCCTTA TTCAAAAGTTGGCGCCTCGCAACAAAGTCTGTTCTTCCATGCGACCCCTC CACACCAGACTCCCAACATTTGATTTCCATTTCCATACCACACAAATACT TAATAGTAAACGACGACCATGACGGTCAGGACGCGCAGCGGTGGCGGAAA CGGCCGGCGCGAGACGAGGGTGAGTGATATGATTGTTCGGCTATGTGATC TGCCTCCTTCTCTTGAGCCATGATGACTCATCCTTTATCCTGTAGGTCAC CCTCCTTCTTGGCTTGCTGGCCTTTGCCTCTCTTTCTCCCATCGTGCACC CTTTTGACCTCCGCCTTCGCATGGCGGCTTCTCACAAGAAAGGGGGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCGCTCTCGCGGCCTC GAAAGGAGGGAGTGTGTCAGTGGGGGCCTCGTCGGGCGGGGCGGGTGGGA GGATCGGGGGAAGCTTGTTAAAATCTTTGAACAGCATCCAGCGGTAGGTT TTGGAGGGAAAAAGGGAAGAAGGGAGGGGTGGATGAAGAAGGGTATTTGT GGCGCCTGGGGGGGTTACGAAACGCTTTCCATACAGGTCTAGCTGGCTGC GTTTCAGAGGTGGATGTATGGGTGTATGGGTGCATGGATGTGTATGCCCT TCTACCCTTTCGCGTCAGTACCATCACTTTCCCCCTTTATCTCCCATTTC AACAACGAAGCAGCTCTTCCTCCTCTTCCTCCTCTTCCTCCTTCGCCCTC GGCTCCTGGCGACACGCCCTCATCCAGTCGCCCTCCTCCTCCTCGTCCTC CCCGTCCTCTTCGTCCTCTTCCTCCTCATCCTCCTCTTCCTCCTCCTCAC TGACCATCAAAGCCGCCTCCCCCTTCCTGTATGGAATCGTGGACGAAAGC GCGCCTCTGCGCTTGGGAGCAGCGCTACTCCGAGGGGCGGCGGAGAGGTT CTGGGCAGTATCTGAGCAGTTTGACATGATGCACGGCACGCTTGACAAGA TGGCCAGGTAGGTTTGTAGAGAAGGAGAGGAGGGAGAGAGGGAAGGAGGG AAGGGGAGATCGTCGATTTGCCCATCTGCCCGTGCTTTTTGCTTACGTCA CGCAACCCCTCCCTCCCTTCCTCCCCTCCCTATCTACCCCTCCCTCCCTC CGTTCTTCCCCTCCCTCCCTCCATCTTCTTCCTTTCTCCCCCCCATCCTC CCCTCCTTCCTTCCCACTCCAGGCTGCTAGCCTTCCTGTGGCTGCGGGCG GTCGAGCGAGTCTTTGACCCGGCCCTGGACCATTTCGGGCACCCCATGAT GGAGGCAGTGGTGCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC TCCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCTCCCCCTCTCCA TTCCACCGATGGAGCCCTTGGCCCCGAGTATCAAGGGAAGGGAAAGTGAA CTGTCCCTCGATTTCAGAGAGGGGGATAACGCGCTTCCTGCCCCTGCTTG ACTCCCCCCCTCCCACCCTCCCTCTCTCTCTCTTCTTGCATCAGGTGGAG CCGTTGGTAGTTGAACCCCTGGGAATGTTGAAACGGACAGTTCGCCGTTT CCTCCGACGGGGACGCCGCTCCCTGGCCCTCGCCTCCGCGGGCATCGCAG TCGGTATAGCGGGAGGCGGGGGAGGGAGCATTTTGGCGCGAGCAGCAATG GGGAGGAAAGGTAGGGAGGGGAGTGAAGGGGAGGGAGGGGACGGATGGGA GGGAGGGAAGGAGGAAAGCAGGGAGGAAGAAAACAGATAGTTACATGCAT AGGATGGTGGGCTAATTACACCCTCCTTCCCTCCCTCTCTCCCTCCCTCC CTCCCTCCCTCCCTCTCATTTCTGCTGCTTCCTTGGGCGCTCCTACCCCC ATCCCGGGCCCATCACTCATGTCTTCCTCCCTTCATCCCTACCTTGTTCC CTCCCTCCCTTCCTCCCTCCCAGCCGCCTCCACAGCCGCCCCCACCCCAA CTCCGGTCTCTGTCCGACGTGACGTTACGCCCGTAGCCTCCGTGCTCGGC CGAGGAGGAGGGAGAGGAAAGGAAGCTGTGGAAGAGAAAGTGGTAAGTAC AAACGCAATTAGACAGGCAAGAGGGAGGGGTGGGGATGAGGCTTAGGGAG CCCCAGGCCGACACTTCCACTTGACTGGGCCGTTGAAAATAGCGGCTCAG CGACCGTTGGCCTCGAATATCAATGTCTGCCTGTCTGTCTTTGTTTAATT ATTTATTTGCTGTGAACCCTCTTCGTGTGTGGGGATGAGGATGGGGGTAT GAATAAAGGGAACGTCAGTGCTTTGTGTCTTCATGACCGGCTCGAGTGGT GTAGGTGCGCTCTTACCCTCCTCCCCTCCCTCCCACCCTCCCTCCCTCCC TCCTCGTCCCCTGTCAGTCCCCTGCCACCGGGAAGAAGCTGGTGCGGAAG CGGAAGAAGAGCGTGGTTCTACAGAAGACGCAGGTCCGTCAGGAGGACGG CAGCCTCGTCACCAAGATCAAAGGCGTCATTGTCGATAGTCCCCCAAAGG TACGCCTGCCCTCCCTCCCTCCCTCCCTCCCTCTCCCCCCTCCCTGGCCT CACTCAAACACGGCCGCAGCATCGTCTGATTTACAAGGGAGATTGCCAGA AGCCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCGTCCTTCTCCTGCC GCATTGTGAAGCTCTCTTCGACTCACCTCTCCCTCCCTCCCTCCCTCCCT CCCTTCCTCCCCAAGGCCGTTGCCGTGGGCGCCGTGGCTGCGGGCGGGCT GGCGTACGTGTACAAGAAGAAGAAGGAGAAGGACGAGCTCTGGTCGCACC TCGACGACGAGTGGTACTACCAGGAGGAAGAGTAAGCATCCCCTCCCTCC CTCCCCCTCCCTCCCTCCCCCCTCCTTTCCTCCCTCCTTCCCTCCCTCCT TTCCCCTCCTGTCTTCTTCCATTCCCTAAGCTGTAGGTTTTTCCTTCTGA TTTCCCTTCCCTCATTTCCCCTCCTGTCTTCCTCCAATCCCTTGAGTGCG TCCTTTTGACCCACCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCC TTTCTTTCGCGCAAAAGTATCCCCAAGGCCCGTCATCTCGCAAAGTCCGG CCATCTCTCCGACATCAAAGTACGCCCTCTTCCCCCCCTTCCCTCCCTCC CTCCCTCCCTCCCTCCCACTCCGTCTCCCTCCCTCTTTCGCCCCACCCCA CCCCCCTCTCCTCCCCCCCTCCCTCCCTCCCTCAGGTCGGCGACATCGAG CAAGCCGTGGCCGAGGGGCGGGCGGGCTCCAAAGGCTCTAAGAAAGATCC CAAGTTCAGGAAGGTGATCAAACCAGAACAGGTATCTCCCTCCCCCTCTC CCTGCCCCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTTCT ATCTACCTGTCTTTCCCTGTCTGCTCTCCAACGAACCCTCCCTCCTTGCC TCCCTCCTTGCCTCCCTCCCTCAGGTCATCCAGAAGGAGTACAAGGAAGA GAAGAAATCCATCTTTACACTCTTCCAGAAGCCCAAGCGTACGTAGGGGA GGAAAGAAAAGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAAGGAAG AGAAAAAGGAGGCGTGGTGCCACGGGGTTTCATGTGGACCGAACGCCGAC TCGTCCCTCCCTCCCTCCCTCCTTCCCTCCTCCCTCCCTTGGACCCATGC CCTGTCATCCGACCACCTACACTGCCACCGACACACTCTGCCTCCCTCCC TCCCTCCCTCCCTCCCTTCCCCCCTCCCTCCCTCCCTCCCTCCCCCCCTC CCTTCCTCCCTGGCAGCCACCCGGATGACGAGCGAGGAGGAGTTGATGTT TGTCGGTCTGGACGCAGAGCGGAAGGAAGGACCTTTCCTGATTGCCTCGG CCATTGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGAGTACTG CTTCGCTCGATGAGCACATTCATTTATGCAACTGACTCAATCCCTCCCTC CCTCCCTCTCCCTCCCTCCCTCCCTCCCCTCCTAGCACTTTCTCACGTGG CCCCCGTGCCTTTCCTGACAGCCGCGCTCCTGGAGAAGGAGGAGGTGATG GGGAAAATCGTCATGGACGCCGCAGAGTTCACGGTAAGAAGGAAGGAAGG AGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAAGGAGGGAG GGAGTATGACGGATTAGCCCTTATCTTCTGACGATGCCCTCTTTGGATGT ACTCTTAATCTATCCCTCCACACACCGACAGCAGGAGGAGAAGGAGGTGG AAGAAGAGAAGAAGGAGGAGGAGGCTGCTGCTATTGCTGCGTCTGACCCC ATGGCGAGGGCAGCGGAGGAAGGGAAGGACGGCGAGGTCAAGGCTGAGTC TGTCGCGGCTCCTGCTGCTGGTGCTGCTGCTGCTATTGCTGCTGCTGGAG AGGAGGAGAAGAAAGAGGAGACAACAGCCGCTCCAAGGAAAGGTGAGTGA AGAAGGGAGAGACAAGTAGGCTCAGGAAAGGAAATGCTCAAACTCATCTC CCTCCCTCCCTCCCTCCCTAGCCCGCTACCCCTCCCTCCTCGCTGCACGG GATGCCGCCAAGCTGACAGCTGGCGAGGCAGCTGACGCTTTTGCCGAGGC CGTTAACGTGGCCGTCGTGAAGATCGTGGACGAGCTGGTGCCCACCCTGA AAGGCATGTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAT CCCTTATTGGTTCAGCTTGTGTAGGCATCCTCATCCTGACACACACTTTC CCCTCCCTCCCTCCCTCCCTGCAGGCAGCGAGGCCCAGACATTGAACGGA GTGGATGCCTTGCTAAAGTTCATGGAGAAAGCCGGAGACATGTTCGCGCA TGTACGAAGGAAGGGGAGGGAGGGAGGGAGGAGGGAGGGAGGGAAACGAG GAAGAAGCCTGGAAAAACCGAGACGCGTCTTCCTTTCATGGATCTTATCC CCTCCCTCCCTCCCGCCCTCCCTCCCTCCCTCCCTCAGGTGGCGCCGAAT GTGACGGACATCGCCCCAGTGCTGTACCAGGGGCAGACCCCGCCCCGCAA GCTGGAGATGATCTACTCGCGGTAGGTGCCGGGGGAGGGAGGGAGGCGGG CGTTGGTGTCGTTCCCTGTCATGGCATGACGGCCTCGTCAAACGATTTGT TTGGCAGAGCTGGCGGCCCGTGGCGACCTCTCTAACCCTCCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCTCCCCCCTTACCTAGCTACTGCCAGCACG CTCTGGTGGAGGACGCCTCCGGGCAGGGCAACGACAAGGCTGTCCGCATT CAGGAGCTCTTCGACATTTCCAACAAGAAGGCCGAGAAAATCAGCACCAA AATCCTCAGGTACCCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT CCCTCCCTCCACAGCTCTCAGATTATTCTGATGGAAGCTTCCCCCCCTCT CCGTCCTTGTCTCCCTCAATCTCCTCTCCTCCTTTCACAGCTCCTCAGAT ATCGTCGTGGAAGTTTCAACCCTTCTCACCCCCCCCTTCTCTCTCCCTTC CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGCTCCCAGGAC AATCTGATGAAGATGCTCGAGAAGCAGTTTGGAGCCGGTGGGGAGGGCAT GGGCGATATGGGTGCTGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGG GAGGAAGGAAGGAAGGAAGGAAGAGAGAGATATATCTAGTCGTCTGCAAT GCCTCTCTGCAAGGCCCAGTTTTTTCACCTCCCTCCCTCCCTCCCTCCCT CGCTCCCTCTCTCCCTCCCTCCTTTCCTCACCCCTTCCCCATTCACAGAG CTGGAGAAGATGTTCGAGCAGTTTGGAGGCATGCCGGGAGGAGGAGGAGG GGGAGGGATGGGGGGAGGAGGGGCAGGGCCGGGGGCGATGCCGCAGAAGG AGATGGAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG GGGGGAGGGAGGAGTAGATTGTAGATGTTTTTTTGTGGGTCCATTTTTGA ATTGGAAGGGAGGAGGGAGGGGGGGAGGGAAGGATGGGGGAAGGACAGAA AAGATACTCATTTGTTGTCGTGCTTGGTTGTTGTGACCGCACACACACCC CATCGAAGACTCACATGTTGTTGTAGCTGCTGTTGATGTTGTCGCGGTTG TTGTAATCGTCATTGTGACCACACACTTACACACACTTCACAGGAGACGC TCGAGGCCCTCAAGGCCGTGGTGCAGCAAGGCGGGCTGTCGGAACAAGAC ATGGAGGTGAGGGAGGGAGGGAAGGGGGGAGGGTCACCATCATCTGCGCT CTCCTCGGAGGCTTTTCGGAGGATAGGAGGGAGGGAGAGAAGGAAGGAAG GAAGAACACCCACTAACCTCTTTCATTTAATCCACAATCAACTAATTTAT AGGAGCTCCGCCAAGCCTGCAAGTCGCAGGGCGTGGACCTGGAAGACCTT GTCCGTACAATGGAAGGTAGGGAGGGAGGGAAGGAGGGAGGGAGCGAGAG GGGGAGAGGGGGAGGGATAGCATCGATTACTAGAACGAGTCAGCGATACT CCATGTCACACACACCTGCGCTCACGCCTTTTCCTCCTTCCTTCCTCCCT CCCTCCCTCCCTCCCTCCCTTCTAGGCCTGTCGGCGGAAATGCCGCCCGA AAGCCAGGAGCTGACGAAGATGTTCAAGCAGGCCTTGAACCGCAGTTAGG GAGGGAAGGAAGGAAGGATGAAGGGAAGGAAGCAGGGAGGGAGAGTAGAG AGCCCTCTTTCTCTTTCTTCTTTGGCAAGAAGTGTCGGTAGGAAGGGAGA AAAAGGAGATAAGAACTGTCGGTTTATTTGGGTGGGACAGAGGGATTAAG AGGTCTTGTTCAGTCGAAGGATTTCATTTGTTATTATGCACACGGATTTG GAAGGGCAGGAGGGAGGGTAGCAGGTATTTGTTGTTTGTTGTGAGCTTGT TGGGTCGGGGTGGTGCGCGCTGGTAGTGGTGTTTGTTTAAGAGAGAAAGC GCAGCAGACAGCAGCGAGAGCAAGACAAGGAGAAAGGAAAGAAGGAGGAC AAGAAGAAATTCATAGAGCAATCAAGAGAGATGAACAGAGTGGACGAGAG CGAGGGAAACGGGAGAGAGTTTGAGAGAGAGAGAGATGACATTAAAAAAG CAAACGGTAAATGGCAAATAAAAGGGAGGAGGGGAGAGAGGTGGGGAGGG GGGGCAAGACGAGAAAAGTCACATTACGGATATAAGACAAAGCGAAAGGA AAGATGCTAGTACTAACAAGAGAAAAGAAGAAGAGGAGAAGAGAAAGAAG AAAAAGAAGAAGAACTTGGTCCAATTTCCCACCATTCTCCCACGCATGGC CAAAAAGTATAGGTACGTAAACAATTCTAGCTTTTGCCGGCA
back to top

Coding sequence (CDS) from alignment at chr18:849170..857211+

>NO18G02620.1 ID=NO18G02620.1|Name=NO18G02620.1|organism=Nannochloropsis oceanica|type=CDS|length=2628bp|location=Sequence derived from alignment at chr18:849170..857211+ (Nannochloropsis oceanica)
ATGACGGTCAGGACGCGCAGCGGTGGCGGAAACGGCCGGCGCGAGACGAG
GGTCACCCTCCTTCTTGGCTTGCTGGCCTTTGCCTCTCTTTCTCCCATCG
TGCACCCTTTTGACCTCCGCCTTCGCATGGCGGCTTCTCACAAGAAAGGG
GGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCGCTCTCGC
GGCCTCGAAAGGAGGGAGTGTGTCAGTGGGGGCCTCGTCGGGCGGGGCGG
GTGGGAGGATCGGGGGAAGCTTGTTAAAATCTTTGAACAGCATCCAGCGC
TCTTCCTCCTCTTCCTCCTCTTCCTCCTTCGCCCTCGGCTCCTGGCGACA
CGCCCTCATCCAGTCGCCCTCCTCCTCCTCGTCCTCCCCGTCCTCTTCGT
CCTCTTCCTCCTCATCCTCCTCTTCCTCCTCCTCACTGACCATCAAAGCC
GCCTCCCCCTTCCTGTATGGAATCGTGGACGAAAGCGCGCCTCTGCGCTT
GGGAGCAGCGCTACTCCGAGGGGCGGCGGAGAGGTTCTGGGCAGTATCTG
AGCAGTTTGACATGATGCACGGCACGCTTGACAAGATGGCCAGGCTGCTA
GCCTTCCTGTGGCTGCGGGCGGTCGAGCGAGTCTTTGACCCGGCCCTGGA
CCATTTCGGGCACCCCATGATGGAGGCAGTGGTGGAGCCGTTGGTAGTTG
AACCCCTGGGAATGTTGAAACGGACAGTTCGCCGTTTCCTCCGACGGGGA
CGCCGCTCCCTGGCCCTCGCCTCCGCGGGCATCGCAGTCGGTATAGCGGG
AGGCGGGGGAGGGAGCATTTTGGCGCGAGCAGCAATGGGGAGGAAAGCCG
CCTCCACAGCCGCCCCCACCCCAACTCCGGTCTCTGTCCGACGTGACGTT
ACGCCCGTAGCCTCCGTGCTCGGCCGAGGAGGAGGGAGAGGAAAGGAAGC
TGTGGAAGAGAAAGTGTCCCCTGCCACCGGGAAGAAGCTGGTGCGGAAGC
GGAAGAAGAGCGTGGTTCTACAGAAGACGCAGGTCCGTCAGGAGGACGGC
AGCCTCGTCACCAAGATCAAAGGCGTCATTGTCGATAGTCCCCCAAAGGC
CGTTGCCGTGGGCGCCGTGGCTGCGGGCGGGCTGGCGTACGTGTACAAGA
AGAAGAAGGAGAAGGACGAGCTCTGGTCGCACCTCGACGACGAGTGGTAC
TACCAGGAGGAAGATATCCCCAAGGCCCGTCATCTCGCAAAGTCCGGCCA
TCTCTCCGACATCAAAGTCGGCGACATCGAGCAAGCCGTGGCCGAGGGGC
GGGCGGGCTCCAAAGGCTCTAAGAAAGATCCCAAGTTCAGGAAGGTGATC
AAACCAGAACAGGTCATCCAGAAGGAGTACAAGGAAGAGAAGAAATCCAT
CTTTACACTCTTCCAGAAGCCCAAGCCCACCCGGATGACGAGCGAGGAGG
AGTTGATGTTTGTCGGTCTGGACGCAGAGCGGAAGGAAGGACCTTTCCTG
ATTGCCTCGGCCATTGCACTTTCTCACGTGGCCCCCGTGCCTTTCCTGAC
AGCCGCGCTCCTGGAGAAGGAGGAGGTGATGGGGAAAATCGTCATGGACG
CCGCAGAGTTCACGCAGGAGGAGAAGGAGGTGGAAGAAGAGAAGAAGGAG
GAGGAGGCTGCTGCTATTGCTGCGTCTGACCCCATGGCGAGGGCAGCGGA
GGAAGGGAAGGACGGCGAGGTCAAGGCTGAGTCTGTCGCGGCTCCTGCTG
CTGGTGCTGCTGCTGCTATTGCTGCTGCTGGAGAGGAGGAGAAGAAAGAG
GAGACAACAGCCGCTCCAAGGAAAGCCCGCTACCCCTCCCTCCTCGCTGC
ACGGGATGCCGCCAAGCTGACAGCTGGCGAGGCAGCTGACGCTTTTGCCG
AGGCCGTTAACGTGGCCGTCGTGAAGATCGTGGACGAGCTGGTGCCCACC
CTGAAAGGCAGCGAGGCCCAGACATTGAACGGAGTGGATGCCTTGCTAAA
GTTCATGGAGAAAGCCGGAGACATGTTCGCGCATGTGGCGCCGAATGTGA
CGGACATCGCCCCAGTGCTGTACCAGGGGCAGACCCCGCCCCGCAAGCTG
GAGATGATCTACTCGCGCTACTGCCAGCACGCTCTGGTGGAGGACGCCTC
CGGGCAGGGCAACGACAAGGCTGTCCGCATTCAGGAGCTCTTCGACATTT
CCAACAAGAAGGCCGAGAAAATCAGCACCAAAATCCTCAGCTCCCAGGAC
AATCTGATGAAGATGCTCGAGAAGCAGTTTGGAGCCGGTGGGGAGGGCAT
GGGCGATATGGGTGCTGAGCTGGAGAAGATGTTCGAGCAGTTTGGAGGCA
TGCCGGGAGGAGGAGGAGGGGGAGGGATGGGGGGAGGAGGGGCAGGGCCG
GGGGCGATGCCGCAGAAGGAGATGGAGGAGACGCTCGAGGCCCTCAAGGC
CGTGGTGCAGCAAGGCGGGCTGTCGGAACAAGACATGGAGGAGCTCCGCC
AAGCCTGCAAGTCGCAGGGCGTGGACCTGGAAGACCTTGTCCGTACAATG
GAAGGCCTGTCGGCGGAAATGCCGCCCGAAAGCCAGGAGCTGACGAAGAT
GTTCAAGCAGGCCTTGAACCGCAGTTAG
back to top
Synonyms
Publications