NO18G02570, NO18G02570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_008900750.1 (hypothetical protein PPTG_08422 [Phytophthora parasitica INRA-310] >ETI53510.1 hypothetical protein F443_03567 [Phytophthora parasitica P1569] >ETL46781.1 hypothetical protein L916_03407 [Phytophthora parasitica] >ETL99903.1 hypothetical protein L917_03331 [Phytophthora parasitica] >ETN13674.1 hypothetical protein PPTG_08422 [Phytophthora parasitica INRA-310] >ETO82176.1 hypothetical protein F444_03640 [Phytophthora parasitica P1976] >ETP51299.1 hypothetical protein F442_03547 [Phytophthora parasitica P10297]) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 44/147 (29.93%), Postives = 66/147 (44.90%), Query Frame = 0 Query: 63 QASSLSPSPKSPPRGRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYVALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHAD 210 + + + P G+W+ C C+ +CL+ + C+ + Q++ R LG+ T +C L + G A+V ++ + QLR M R R IPG D CAS WC CCTLTQ+A HV Y+ D Sbjct: 29 EETKIDRDPSGILLGKWEAQLCGCCTHCVPNCLMATFCPCISVAQISAR--------------LGMTTYTCALLTFVLLFAFTCGFAHVVLFVW----IWQLRQMTRERFKIPGGCCEDYCASFWCPCCTLTQIATHVKSYKPGSCD 157
BLAST of NO18G02570 vs. NCBI_GenBank
Match: EJK71107.1 (hypothetical protein THAOC_07484 [Thalassiosira oceanica]) HSP 1 Score: 75.1 bits (183), Expect = 3.100e-10 Identity = 63/203 (31.03%), Postives = 83/203 (40.89%), Query Frame = 0 Query: 46 LPAVFVSVGPTSSNPFEQASSLSPSPKSPPRGRWKDGFCDWHK-DCLHSCL-LGSLLNCVLLGQVAQRMKF-----------CMRFKEVTLVSLGLWTLSCVLYVALPKNVGPG-GL------------ANVAYSL----FFLLVLCQLRGMVRSRDAIPGDRFW---DCCASLWCSCCTLTQMARHVFHYQDNHADCSLRPG 216 +PA VS G T PFE P+ + P G WKDG CD C H L +G LLGQV R++ FK + ++ S + L + P GL N+A+SL F + V+ + R +R R IP DCC + WC CCT+TQMAR Y+ A C G Sbjct: 47 VPAGGVSRGQTFRAPFEPGGGGVPA-SAVPEGLWKDGLCDCCMFGCCHPTLWMGMCCPLALLGQVQNRLRLNWLGVRANPGDQSPFKVLLGITFFAMVWSQLFSSLLSGYIDPNTGLPIEGSPFWSIYSVNIAFSLALGVFSIYVIFKTRQHIRERSGIPEKSCQGCEDCCCAFWCGCCTVTQMARQTAEYETYVAQCCSETG 248
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_012206049.1 (hypothetical protein SPRG_11191 [Saprolegnia parasitica CBS 223.65] >KDO23261.1 hypothetical protein SPRG_11191 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 71.6 bits (174), Expect = 3.400e-9 Identity = 48/145 (33.10%), Postives = 63/145 (43.45%), Query Frame = 0 Query: 77 GRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYV--ALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHADCSLRPGSDSF 220 GRWK G C+ + + + CV L QV R+ + F V L S L+ L +L A+ + G L S L +C LR VR IPG DC +L+C CC+L QMA HV Y+ R SF Sbjct: 21 GRWKIGIFGCLDTCIPNTAMVTFCPCVSLAQVTTRIGYGQYFLHVLLASFVLYILYLILCFVDAMWFQIVVGIL-----SFLMFLFMCHLRCKVRDLFHIPGSIIEDCLCALFCGCCSLAQMATHVESYKPGDCQFEARATLPSF 160
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_009537139.1 (hypothetical protein PHYSODRAFT_340648 [Phytophthora sojae] >XP_009540027.1 hypothetical protein PHYSODRAFT_343193 [Phytophthora sojae] >EGZ04531.1 hypothetical protein PHYSODRAFT_343193 [Phytophthora sojae] >EGZ07573.1 hypothetical protein PHYSODRAFT_340648 [Phytophthora sojae]) HSP 1 Score: 71.2 bits (173), Expect = 4.500e-9 Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 0 Query: 57 SSNPFEQASSL---SPSPKSPPR----GRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYVALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHAD 210 +++P E A ++ P P P G+W+ FC C+ +CL+ + CV + Q+ R LGL T +CVL + + +A+++ F+ + QLR + R R IPG D CAS W CCTL Q+A H+ Y+ D Sbjct: 16 NASPTEVAVAIPVEDPKPDKDPSGIMLGKWEAQFCGCCTHCVPNCLMATCCPCVSVAQITAR--------------LGLTTYTCVLITLV---LLFSFTCGIAHAILFVWI-WQLRQLTRERFKIPGGCCEDYCASFWFPCCTLAQIATHIKSYKPGTCD 157
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_008616269.1 (hypothetical protein SDRG_11991 [Saprolegnia diclina VS20] >EQC30416.1 hypothetical protein SDRG_11991 [Saprolegnia diclina VS20]) HSP 1 Score: 70.5 bits (171), Expect = 7.600e-9 Identity = 50/179 (27.93%), Postives = 75/179 (41.90%), Query Frame = 0 Query: 53 VGPTSSNPFEQAS--SLSPSPKSP--------PRGRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSC--VLYVALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHADCSLRPGSDSF 220 + PT+ P + A + PSP + G W G CD +K + + + CV L Q R+ ++ LV L+ L+ + + +SL +LVL LRG VR IPG+ DCC +++C CCTL Q+A V Y N S + +F Sbjct: 3 IKPTTDAPTDMAPYVVVIPSPNAVGVHAMTALTTGHWSTGICDCYKSLIPNACMAWWCPCVSLAQTTTRIGLSSSYRATVLVFAVLYLLATGPIFLPVYWDRWSHWDNGCLIFSLIVVLVLMILRGRVRIMLRIPGNVLEDCCCAIFCHCCTLAQLATQVDAYDANTCHFSAKDTLPAF 181
BLAST of NO18G02570 vs. NCBI_GenBank
Match: ETK93370.1 (hypothetical protein L915_03455 [Phytophthora parasitica] >ETM53064.1 hypothetical protein L914_03433 [Phytophthora parasitica] >ETP23288.1 hypothetical protein F441_03561 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 70.5 bits (171), Expect = 7.600e-9 Identity = 43/147 (29.25%), Postives = 65/147 (44.22%), Query Frame = 0 Query: 63 QASSLSPSPKSPPRGRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYVALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHAD 210 + + + P G+ + C C+ +CL+ + C+ + Q++ R LG+ T +C L + G A+V ++ + QLR M R R IPG D CAS WC CCTLTQ+A HV Y+ D Sbjct: 29 EETKIDRDPSGILLGKREAQLCGCCTHCVPNCLMATFCPCISVAQISAR--------------LGMTTYTCALLTFVLLFAFTCGFAHVVLFVW----IWQLRQMTRERFKIPGGCCEDYCASFWCPCCTLTQIATHVKSYKPGSCD 157
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_002179189.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49012.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.3 bits (168), Expect = 1.700e-8 Identity = 50/169 (29.59%), Postives = 72/169 (42.60%), Query Frame = 0 Query: 75 PRGRWKDGFCD-----------WHKDCLHSCLLGSLLN---CVLLGQVAQRMKFCMRFKEVTLVSLGLWTLS-CVLYVALPKNV----GPGGLANVAY------SLFFLLVLCQLRGMVRSRDAIPGDRFWDC---CASLWCSCCTLTQMARHVFHYQDNHADCSLRPG 216 P G+WKDG CD W C +G +++ LG+ F+ V L+ + S C+L LP P +A + + S++ + LC++R VR+R IP R C C SLWCSCC +QM RH ++ A C R G Sbjct: 83 PVGQWKDGLCDCCALGVCHPTLWCALCCTQIAMGQIMSRMQLTWLGEYGPIASTANTFRVVVLLVASYYAYSTCLLMAELPYATQGVPTPTSIAVLKFVGSFVVSVWAVYSLCRVRENVRARYQIPETRCAGCEDLCCSLWCSCCVTSQMLRHTGEHETYPAVCCTRTG 251
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_012209029.1 (hypothetical protein SPRG_14426 [Saprolegnia parasitica CBS 223.65] >KDO20291.1 hypothetical protein SPRG_14426 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 69.3 bits (168), Expect = 1.700e-8 Identity = 47/145 (32.41%), Postives = 63/145 (43.45%), Query Frame = 0 Query: 77 GRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYV--ALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHADCSLRPGSDSF 220 GRWK G C+ + + ++ CV L QV R+ + F V L S L+ + L A+ + G L S L +C LR VR IPG DC +L+C CC+L QMA HV Y+ R SF Sbjct: 21 GRWKIGIFGCLDTCIPNTAMVTICPCVSLAQVTTRIGYGEYFLHVLLASFFLYIMYLTLCFVDAMWFQIIVGIL-----SFIMFLFMCHLRCKVRDLFHIPGSIIEDCLCALFCGCCSLAQMATHVESYKPGDCQFEARATLPSF 160
BLAST of NO18G02570 vs. NCBI_GenBank
Match: GAP84871.1 (putative plac8 family protein [Rosellinia necatrix]) HSP 1 Score: 68.2 bits (165), Expect = 3.800e-8 Identity = 41/124 (33.06%), Postives = 58/124 (46.77%), Query Frame = 0 Query: 77 GRWKDGFCDWHKDCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYVALPKNVGPGGLANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHV 201 G W+ G C SCLLG L C+LLGQ ++R+ ++ ++ S + C+++ AL G G + Y++ RG +R R I G DCC S WCSCC L Q V Sbjct: 51 GEWQTGICSCGP--CSSCLLGWCLPCILLGQTSERI------RDPSMQSADMLNSDCLIHGALTCFTGCGWI----YAMI-------KRGEIRERYGIKGSGCGDCCVSFWCSCCALIQQDNEV 155
BLAST of NO18G02570 vs. NCBI_GenBank
Match: XP_008611353.1 (hypothetical protein SDRG_07306 [Saprolegnia diclina VS20] >EQC35069.1 hypothetical protein SDRG_07306 [Saprolegnia diclina VS20]) HSP 1 Score: 67.8 bits (164), Expect = 4.900e-8 Identity = 60/195 (30.77%), Postives = 82/195 (42.05%), Query Frame = 0 Query: 35 EDDKLLSPENLLPAVFVSVGPTSSNPFEQASSLSPSPKSPPRGRW-KDGFC--DWHK--------DCLHSCLLGSLLNCVLLGQVAQRMKFCMRFKEVTLVSLGLWTLSCVLYVALPKNVGPGGL----ANVAYSLFFLLVLCQLRGMVRSRDAIPGDRFWDCCASLWCSCCTLTQMARHVFHYQDNHADCSLRP 215 +DD P N P + + G P E +L G W ++G W D + + ++ LL CV LGQV+ R+ F + L+ VLYV G L A SL ++++ LR VR IPG D CA LWC CCT+ Q+A HV Y+ + CSLRP Sbjct: 13 DDDVPSLPPNQEPVLLHTTGDDGGRPTE-VGTLQRDHGLKEFGEWDRNGILCRQWRSSLLGALCVDVVPNGIVSILLPCVPLGQVSHRLGL-RPFSTMA-------ALTGVLYVTAIACSGINDLYAHSAGAVASLLLVVLVTSLRTTVRHLFFIPGSCLGDVCAVLWCGCCTVAQLAAHVQAYEPH--TCSLRP 196 The following BLAST results are available for this feature:
BLAST of NO18G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02570 ID=NO18G02570|Name=NO18G02570|organism=Nannochloropsis oceanica|type=gene|length=2921bpback to top protein sequence of NO18G02570.2 >NO18G02570.2-protein ID=NO18G02570.2-protein|Name=NO18G02570.2|organism=Nannochloropsis oceanica|type=polypeptide|length=207bpback to top protein sequence of NO18G02570.1 >NO18G02570.1-protein ID=NO18G02570.1-protein|Name=NO18G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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