NO18G01740, NO18G01740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G01740 vs. NCBI_GenBank
Match: XP_005853393.1 (heat shock protein, mitochondrial [Nannochloropsis gaditana CCMP526] >EKU22964.1 heat shock protein, mitochondrial [Nannochloropsis gaditana CCMP526] >EWM23380.1 chaperonin cpn10 [Nannochloropsis gaditana]) HSP 1 Score: 235.3 bits (599), Expect = 1.400e-58 Identity = 122/170 (71.76%), Postives = 137/170 (80.59%), Query Frame = 0 Query: 13 LQFLLVVVIVTLLVERAAAFIPRLPLLS------GASSSALKMVAVDDSTTLVGMTHDEYIGTLPEQAKSMAAEWQYLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRDETWEGRKFSFIRSHDVLSRIGATQ 177 +Q+LLVVV++ L + A AFIP LP + A + +AV DS+TLV + HDEYI TLPEQA+SM AEWQYLLVERLE PT+TQGGLFLPSTDQDPLHMVRIVSIGSGLVGESG+LT I+NL GDVA VKQPWGIGPRDE WEGRKFSFIRSHDVLSRIG T+ Sbjct: 19 MQYLLVVVVLILSLGPAKAFIPLLPHMPLQHHKYLAGGPDVVRMAVQDSSTLVSLPHDEYINTLPEQARSMKAEWQYLLVERLEAPTETQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGMLTTIENLGPGDVAYVKQPWGIGPRDENWEGRKFSFIRSHDVLSRIGPTK 188
BLAST of NO18G01740 vs. NCBI_GenBank
Match: CBJ32290.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.4 bits (233), Expect = 3.900e-16 Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 70 LPEQAKSMAAEWQYLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRDETWEGRKFSFIRSHDVLSRIGATQE 178 LP QA+ A + + VERL Q GLFLP+ +H+ ++VSIG+G GESG +T +K GD+ VK P+GIGPRD+ + G+KFSF+R + + I +++ Sbjct: 7 LPTQAQRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSIGNGREGESGNVTPNDAVKQGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSED 114
BLAST of NO18G01740 vs. NCBI_GenBank
Match: GAX22573.1 (hypothetical protein FisN_14Hh201 [Fistulifera solaris]) HSP 1 Score: 89.0 bits (219), Expect = 1.600e-14 Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 0 Query: 81 WQYLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRD-ETWEGRKFSFIRSHDVLSRI 173 + LVER++ + GLFLP+ D LH+ R++++G G E+G++ + ++K GD+ + K PWGIGP+D ET +GRK+SF+RS D+ + I Sbjct: 52 YDMFLVERIQGRPKLDSGLFLPNEDLPRLHLCRVIAMGPGREEENGLVAPMPDVKIGDIVVAKNPWGIGPKDEETTDGRKYSFMRSQDLAAVI 144
BLAST of NO18G01740 vs. NCBI_GenBank
Match: GAX10688.1 (hypothetical protein FisN_14Lh201 [Fistulifera solaris]) HSP 1 Score: 89.0 bits (219), Expect = 1.600e-14 Identity = 39/93 (41.94%), Postives = 63/93 (67.74%), Query Frame = 0 Query: 81 WQYLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRD-ETWEGRKFSFIRSHDVLSRI 173 + LVER++ + GLFLP+ D LH+ R++++G G E+G++ + ++K GD+ + K PWGIGP+D ET +GRK+SF+RS D+ + I Sbjct: 54 YDMFLVERIQGRPKLDSGLFLPNEDLPRLHLCRVIAMGPGREEENGLVAPMPDVKIGDIVVAKNPWGIGPKDEETTDGRKYSFMRSQDLAAVI 146
BLAST of NO18G01740 vs. NCBI_GenBank
Match: EJK70949.1 (hypothetical protein THAOC_07652 [Thalassiosira oceanica]) HSP 1 Score: 88.2 bits (217), Expect = 2.800e-14 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 0 Query: 78 AAEWQYLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRD-ETWEGRKFSFIRSHDV 169 A + +LVERL+ T+ GLF+P + LH+ R++S+G G E+G++ + N+ G + + K PWGIGP+D ET +GRK SF+RS D+ Sbjct: 21 ACTYDMVLVERLQDRPDTESGLFVPRENLPALHLCRVISMGPGREEENGMVAPMPNISPGSIVIAKNPWGIGPKDEETPDGRKLSFMRSQDI 112
BLAST of NO18G01740 vs. NCBI_GenBank
Match: XP_002179516.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49339.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.1 bits (209), Expect = 2.400e-13 Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 0 Query: 39 LSGASSSALKMVAVDDSTTLVGMTHDEYIGTLP-EQAKSMAAEWQ----YLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRD-ETWEGRKFSFIRSHDV 169 L+ A+SS ++ A+ IG L +++ WQ +LVER++ T+ GLF+P D LH+ +++S+G G E+G ++ + ++ GD+ + K PWGIGP+D ET +G+K SF+RS D+ Sbjct: 8 LAMAASSLSRVSALSSKAPKAKFYGGAGIGRLVFDESAGKENAWQCHYDMVLVERVQGKPPTESGLFVPQEDLPKLHLCKVLSVGPGREEENGRVSPMPEIRVGDIVIAKNPWGIGPKDEETADGKKLSFMRSQDI 143
BLAST of NO18G01740 vs. NCBI_GenBank
Match: OEU11154.1 (hypothetical protein FRACYDRAFT_246265 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 80.1 bits (196), Expect = 7.600e-12 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 0 Query: 64 DEYIGTLPEQAKSMAAEWQYLLVERLE----PPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESG-VLTQIQNLKAGDVAMVKQPWGIGPRDETW-EGRKFSFIRSHDVLSRI 173 DEY G +A + + +LVER++ P + LF+P LH+ RI+S+G+G E+G V + NLK GD+ K PWGIGP+DE +G K SFIR+ DV ++I Sbjct: 54 DEYSG----KAGTWNCHYDMVLVERIQKRKGPADVDENSLFVPDDQLPRLHLCRILSVGNGREEENGSVAPDLDNLKVGDMIYSKHPWGIGPKDEELADGTKLSFIRTIDVAAKI 164
BLAST of NO18G01740 vs. NCBI_GenBank
Match: XP_002286407.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96048.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.6 bits (187), Expect = 8.400e-11 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 0 Query: 80 EWQYLLVERLEPPTQTQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGVLTQIQNLKAGDVAMVKQPWGIGPRD-ETWEGRKFSFIRSHDVLSRIGAT 176 ++ +LVERL+ +T+ GLF+P + LH+ + G E+G++ + N+ GDV + K PWGIGP+D ET +G+K SF+R D+ + + T Sbjct: 75 KYDMILVERLQDRPKTESGLFVPRENLPKLHLCK------GREEENGMIAPMPNVNVGDVVIAKNPWGIGPKDEETADGKKLSFMRGADIAAVVEGT 165 The following BLAST results are available for this feature:
BLAST of NO18G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01740 ID=NO18G01740|Name=NO18G01740|organism=Nannochloropsis oceanica|type=gene|length=2266bpback to top protein sequence of NO18G01740.1 >NO18G01740.1-protein ID=NO18G01740.1-protein|Name=NO18G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=178bpback to top Synonyms
Publications
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