NO18G01380, NO18G01380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G01380 vs. NCBI_GenBank
Match: GAX24494.1 (hypothetical protein FisN_18Lh044 [Fistulifera solaris]) HSP 1 Score: 96.3 bits (238), Expect = 4.500e-16 Identity = 63/175 (36.00%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 317 IPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMAGER-YKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDDAILAEK--GGEEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRFAVQDK 489 + + VLKS LQK+IRR R + KV ++L ++ EL RRLPII+LED HP + WLMMA + Y +L + +++EI + + D S+ ++ DP + D++ EE + L S+ L+ M+AR YGGM D MLR+ A +WR RF D+ Sbjct: 203 LSVPVLKSILQKSIRRRRPLPSVKVAMELADKSLGELLRRLPIIVLEDSTLHPD-FDLLVWLMMANSKDYSIPPSLLARVFEIIFEICSCPWIDSCSSITPEVDDPPNAIGDSLATASLTSLHEELLTQQLFSQSSSLIW-AMLARAEYGGMKGDVQMLRSFATVWRTRFERDDQ 375
BLAST of NO18G01380 vs. NCBI_GenBank
Match: GAX17843.1 (hypothetical protein FisN_18Hh044 [Fistulifera solaris]) HSP 1 Score: 93.2 bits (230), Expect = 3.800e-15 Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 317 IPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMA-GERYKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDD--AILAEKGGEEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRFAVQDK 489 + + VLKS LQK+IRR R + KV ++L ++ EL RRLPII+LED HP + WLMMA + Y ++ + +++EI + + D S+ ++ DP D+ + + + EE +L S L+ M+AR YGGM D MLR+ A +WR RF D+ Sbjct: 286 LSVPVLKSILQKSIRRRRPLPSVKVAMELADKSLGELLRRLPIIVLEDSTLHPD-FDLLVWLMMAHSKEYSIPPSILPRVFEIIFEICSCPWVDSCSSVTPEVDDPPKDIGNSPSTASLTSLHEEFVTHELPSHSSSLIW-AMLARAEYGGMKGDIQMLRSFATVWRTRFESGDQ 458
BLAST of NO18G01380 vs. NCBI_GenBank
Match: EJK52028.1 (hypothetical protein THAOC_28746 [Thalassiosira oceanica]) HSP 1 Score: 92.0 bits (227), Expect = 8.600e-15 Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 0 Query: 320 SVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMAGER-YKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLP---DVDDAILA--EKGGEEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRF 484 S LKS LQK+ RR GE +V ++L+ RA + RRLPII+LED HP + WLM+A + Y P + L+ ++YE+A+ DF D ++ + L+ EK GEEE +++R M+ R YGGM+CD M+ A++WR RF Sbjct: 276 SHLKSCLQKSTRRRSGEQAVRVAMELIDRAYDQFIRRLPIIILEDSTLHPD-FGLLVWLMIAESKGYVPSRQILNRLLEIVYEVASCPLKDFLNKDIDCSSDSFSLSLNLPSSALSPNEKPGEEE------------VVVRSMLLRAQYGGMSCDIDMMLRFARIWRNRF 432
BLAST of NO18G01380 vs. NCBI_GenBank
Match: GAX78038.1 (hypothetical protein CEUSTIGMA_g5480.t1 [Chlamydomonas eustigma]) HSP 1 Score: 90.9 bits (224), Expect = 1.900e-14 Identity = 81/255 (31.76%), Postives = 115/255 (45.10%), Query Frame = 0 Query: 263 QEYWWEKEIVLP---------------------GSKTARLLLRTNIAPLQPFCSSSLSTSFSQNHHQRHHLPLPD------IPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMA-GERYKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDD--AILAEKGGEEE--RREEDL--SSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRF 484 Q YWW+K V+P ++L++TN+ P + L T + + H H P P+ IP LKSALQK +R R A+ + L+ P +L RRLPII LED I H P L V W+M A + Y L +++ YEIA+ K + D LP ++D I + GE + E L +S++ LL + R +GGM+ D MLR +KLW RF Sbjct: 119 QCYWWQKGEVIPPYARSLPPALWSKSMLMRLDSNGVEKKVLIQTNMKPDE----DCLVTWDNMSLHSNSHFP-PEGRWKGGIP--ALKSALQKCVRLGRASCAARCAMHLMKEDPSQLLRRLPIICLEDAILH-PRLAVIVWIMAAQAKGYVFGLMLASEILKFTYEIASVK-----------VKDILPTIEDNMRISTNQDGENSILQMENSLGDASKDEITLLNAINLRASFGGMSGDVVMLRGYSKLWSSRF 354
BLAST of NO18G01380 vs. NCBI_GenBank
Match: PNH10384.1 (hypothetical protein TSOC_002885 [Tetrabaena socialis]) HSP 1 Score: 90.9 bits (224), Expect = 1.900e-14 Identity = 76/215 (35.35%), Postives = 101/215 (46.98%), Query Frame = 0 Query: 281 LLLRTNIAP----LQPFCSSSLSTSFSQNHHQRHHLPLPDIPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMA-GERYKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDDA------ILAEKGG-EEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRF 484 L L TN+AP L + S L ++ + P S LKSALQK +R RG A+ L L P +L RRL II +ED I H P L + WLM A G+ Y AA L+ + Y++AT + D LP+ D + A GG + + DL + E L+RC++ R YGGMACD +LR A W RF Sbjct: 286 LALATNVAPRDGGLVSWSSDGLPSNVLPPEGRWRGSP------SALKSALQKAVRLGRGGCAARAALHLAKEDPAQLLRRLSIICVEDSILH-PGLPLVVWLMAAQGKGYIMGAAHVSALLCLTYQLAT-----------VGVRDGLPEPWDGGGGEAEVGASGGGPQADDPARDLPAAEAG-LIRCLLLRASYGGMACDVRLLRGFAAYWSARF 481
BLAST of NO18G01380 vs. NCBI_GenBank
Match: OEU10666.1 (hypothetical protein FRACYDRAFT_247207 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 86.7 bits (213), Expect = 3.600e-13 Identity = 79/258 (30.62%), Postives = 123/258 (47.67%), Query Frame = 0 Query: 267 WEKEIVLPGSKTARLLLRTNIAPLQPFCSS---SLSTSFSQNHHQ--RHHLPLPDIPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHP--PALVVFTWLMMA-GERYKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDDAILAEKGGEEERREEDLS---------------------------SRECQLLLR-------CMVARRHYGGMACDAHMLRNLAKLWRVR 483 W + + G+K L P++ SS SLS S SQNHH+ ++H L + VLKS LQK+IRR + + ++ +L+ ++ ++ RRLPII+LED HP P L+ WLM++ + Y P ++K ++ ++YEI++ +Y D H I AE GG ++ + EDLS + C +LL+ ++ R HYGGMA D ML A++W R Sbjct: 245 WMSTVQVRGNKERGSL------PIELIVSSSIPSLSLSSSQNHHRLVQNHTKL---SVPVLKSILQKSIRRRKPLPSIRIASELIDKSLGDVLRRLPIIILEDSTYHPKFPFLI---WLMISVSKHYIPSLEIKKQILCIVYEISSCRYQD------HII------TSSTTTAESGGRQD-QNEDLSLASIHRNVISDDNXXXXXXXXXXXXXXHQPCAVLLKDDGLIIWSILMRSHYGGMAGDVRMLHIYAQIWYER 477
BLAST of NO18G01380 vs. NCBI_GenBank
Match: XP_002290034.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91786.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.4 bits (202), Expect = 6.800e-12 Identity = 54/168 (32.14%), Postives = 86/168 (51.19%), Query Frame = 0 Query: 317 IPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMA-GERYKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDDAILAEKGGEEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRF 484 + ++ LKS LQK+IRR +V L+L+ ++ L RRLPII LED HP + WLM+A + Y P +L ++++++E+A+ D Y + + + + + + R L + ++R M+ R YGGMACD ML + AK W RF Sbjct: 328 LSVAQLKSCLQKSIRRRAPLPAVRVALELVDKSWEALIRRLPIICLEDSFLHPD-FALLVWLMVADSKNYAPPTSLIVRVMQIVFEMASCPRQDICIESYGDMSGMIWSFSMSTPSSQLLPSKLRSPSLDN--AGTVIRTMLLRAQYGGMACDVQMLNSFAKTWLKRF 492
BLAST of NO18G01380 vs. NCBI_GenBank
Match: XP_004993084.1 (hypothetical protein PTSG_06192 [Salpingoeca rosetta] >EGD74184.1 hypothetical protein PTSG_06192 [Salpingoeca rosetta]) HSP 1 Score: 80.9 bits (198), Expect = 2.000e-11 Identity = 60/172 (34.88%), Postives = 83/172 (48.26%), Query Frame = 0 Query: 315 PDIPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMAGERYKP-DAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDDAILAEKGGEEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRFAV 486 PD +S+LKS LQK +RR R E A +L+ A +L RRLPII++ED +C V WLM A + A + LV +A + D S PD +A +K +E + EE S LL M RR +GGM+CD M+ + ++W RF V Sbjct: 110 PDHAVSILKSHLQKCVRRQRAELVASTMRELMALAMFDLLRRLPIIVIED-VCLHQQFPVLVWLMAAVSKGADLSAEMLDWLVSFAAMLANCPHRDDSAM--------FPDSAEAFDVQKISKELKNEEQKS------LLYSMQLRRSFGGMSCDGAMMDKMTRVWLRRFKV 266
BLAST of NO18G01380 vs. NCBI_GenBank
Match: XP_003055706.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60958.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 79.7 bits (195), Expect = 4.400e-11 Identity = 64/193 (33.16%), Postives = 85/193 (44.04%), Query Frame = 0 Query: 315 PDIPLSVLKSALQKNIRRSRGEATAKVGLQLLHRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMAGER-YKPDAALRKVLVRMLYEIAT--GKYTDFSRSLYHQILDPLPDVDDAILAEKGGEEERREEDLSSRE-CQLLLRC--------------MVARRHYGGMACDAHMLRNLAKLWRVRFAVQDKD 490 P + VLKSALQKNIRR R + A+ LL ++P E RRLP+I LED + H PA + WL A + Y + R V+VR E+A GK D +DA ++ G E C L + C + R H+GGM D MLR A WR RF ++ + Sbjct: 204 PHLSPGVLKSALQKNIRRGRIVSAARCARLLLLQSPSEALRRLPVIALEDAVAH-PATPLVAWLAAAHSKGYALPRSARDVVVRYAAELAACDGKDVDVVG-------------EDAFDEKENGAXXXXXXXXXXXELCNLAVACRGLDASRQSGMIVALCVRAHFGGMKGDVDMLRASAATWRARFVEENAE 382
BLAST of NO18G01380 vs. NCBI_GenBank
Match: XP_001418812.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97105.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 79.7 bits (195), Expect = 4.400e-11 Identity = 62/170 (36.47%), Postives = 90/170 (52.94%), Query Frame = 0 Query: 317 IPLSVLKSALQKNIRRSRGEATAKVGLQLL--HRAPLELYRRLPIIMLEDGICHPPALVVFTWLMMAGER-YKPDAALRKVLVRMLYEIATGKYTDFSRSLYHQILDPLPDVDDAILAEKGGEEERREEDLSSRECQLLLRCMVARRHYGGMACDAHMLRNLAKLWRVRF 484 + LSV+KSALQKNIRR R A ++V + + +A +E RRL II LED I HP +V+ TWLM A + ++P ALR + R+ E+A + D S+ + + D +LA E L + E ++ M+ R H+GGM D ML + +W RF Sbjct: 199 LKLSVIKSALQKNIRRGRAAAASRVAMHMCLDPQALIECVRRLVIISLEDAILHPD-VVLLTWLMCATSKGFEPTDALRAAVARIAGEMAAIRIKD---SVSYGVAG---DSASGMLALNDVEAA-----LPAAEATVVQALMI-RAHFGGMPGDVAMLHGFSHVWFNRF 355 The following BLAST results are available for this feature:
BLAST of NO18G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G01380 ID=NO18G01380|Name=NO18G01380|organism=Nannochloropsis oceanica|type=gene|length=2962bpback to top protein sequence of NO18G01380.1 >NO18G01380.1-protein ID=NO18G01380.1-protein|Name=NO18G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=785bpback to top Synonyms
Publications
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