NO18G00920, NO18G00920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_005854904.1 (small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526] >EKU21448.1 small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 342.4 bits (877), Expect = 9.000e-91 Identity = 172/192 (89.58%), Postives = 185/192 (96.35%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQTD 193 MAT+KIVKP+GQE D+ D KVASEL LE+NNPEWKADLKDLYITAAKEVDVGKTQAIVVFVP++LLK YHKIQQRLVRELEKKFSGSHVV++AQRTILGKSYGRSTKT+G RPRSRTL+AVQDAILED+VYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKL+TFKEVYKKLTNKEVEFTFFVKQT+ Sbjct: 1 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTE 192
BLAST of NO18G00920 vs. NCBI_GenBank
Match: EWM23287.1 (40s ribosomal protein s7 [Nannochloropsis gaditana]) HSP 1 Score: 342.4 bits (877), Expect = 9.000e-91 Identity = 172/192 (89.58%), Postives = 185/192 (96.35%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQTD 193 MAT+KIVKP+GQE D+ D KVASEL LE+NNPEWKADLKDLYITAAKEVDVGKTQAIVVFVP++LLK YHKIQQRLVRELEKKFSGSHVV++AQRTILGKSYGRSTKT+G RPRSRTL+AVQDAILED+VYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKL+TFKEVYKKLTNKEVEFTFFVKQT+ Sbjct: 26 MATKKIVKPRGQEPDEWDTKVASELMNLENNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTE 217
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_005853994.1 (small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526] >EKU22363.1 small subunit ribosomal protein S7e [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 303.1 bits (775), Expect = 6.000e-79 Identity = 151/164 (92.07%), Postives = 162/164 (98.78%), Query Frame = 0 Query: 29 ESNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQTD 193 ++NNPEWKADLKDLYITAAKEVDVGKTQAIVVFVP++LLK YHKIQQRLVRELEKKFSGSHVV++AQRTILGKSYGRSTKT+G RPRSRTL+AVQDAILED+VYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKL+TFKEVYKKLTNKEVEFTFFVKQT+ Sbjct: 7 KNNNPEWKADLKDLYITAAKEVDVGKTQAIVVFVPYRLLKAYHKIQQRLVRELEKKFSGSHVVVIAQRTILGKSYGRSTKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLDTFKEVYKKLTNKEVEFTFFVKQTE 170
BLAST of NO18G00920 vs. NCBI_GenBank
Match: CBJ27078.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 255.8 bits (652), Expect = 1.100e-64 Identity = 130/187 (69.52%), Postives = 161/187 (86.10%), Query Frame = 0 Query: 5 KIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 KIVKP+GQEAD+ + +VA ELF LE + + KAD++DLYIT AK+VDV G +AI++FVP++LL+ YHKIQ RLVRELEKKFSG HVV++A RTILGKSY RSTKTQG+RPRSRTL+AVQDA+LED+V+PTEIVGKRTRCK+DG+K LKV LD KDQ+NV+ KL+TF VYKK+TNK+V F F V++ Sbjct: 525 KIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 711
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_008618076.1 (40S ribosomal protein S7 [Saprolegnia diclina VS20] >XP_012207567.1 40S ribosomal protein S7 [Saprolegnia parasitica CBS 223.65] >EQC28428.1 40S ribosomal protein S7 [Saprolegnia diclina VS20] >KDO21767.1 40S ribosomal protein S7 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 248.4 bits (633), Expect = 1.800e-62 Identity = 133/191 (69.63%), Postives = 159/191 (83.25%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVD-VGKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 M++ KIVKP GQ ADD + +VA EL LE+++ + KADLKDLYITAAK+VD VG +AIV+FVPF+LLK ++KIQ RLVRELEKKFSG HVV++AQRTILGK + RS T R RSRTL++VQDAIL+D+VYPTEIVGKRTRCK+DGTK LKVFLD KDQ+NV+ KL+TF VYKKLTNKEV F F V+Q Sbjct: 1 MSSAKIVKPAGQVADDFEKQVAHELAALENSSADIKADLKDLYITAAKQVDVVGGRKAIVIFVPFRLLKSFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRSAHTSAPRARSRTLTSVQDAILDDLVYPTEIVGKRTRCKLDGTKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKEVVFEFPVQQ 191
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_009033445.1 (hypothetical protein AURANDRAFT_70049 [Aureococcus anophagefferens] >EGB12412.1 hypothetical protein AURANDRAFT_70049 [Aureococcus anophagefferens]) HSP 1 Score: 247.3 bits (630), Expect = 3.900e-62 Identity = 127/187 (67.91%), Postives = 158/187 (84.49%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTF 187 MA++K VKP+GQE D+ + +VA+EL+ LE ++ E KA+LK+LY +AKEV+V G +AI+VFVPF LLK YHKIQ RLVRELEKKFSG HV++VAQRTILGK+Y RS+ ++G RPRSRTL++VQD IL+D+VYPTEIVGKRTRCK+DG+K LKV LD KDQ+NV+ KL+TF VYKKLTNKEV F F Sbjct: 141 MASKKCVKPEGQEPDEIESQVAAELYNLEQSSTELKAELKELYFLSAKEVEVGGGKKAIIVFVPFGLLKSYHKIQTRLVRELEKKFSGRHVIIVAQRTILGKNYARSSSSKGPRPRSRTLTSVQDCILDDLVYPTEIVGKRTRCKLDGSKVLKVLLDPKDQVNVETKLDTFSFVYKKLTNKEVIFEF 327
BLAST of NO18G00920 vs. NCBI_GenBank
Match: OQR82502.1 (40S ribosomal protein S7 [Achlya hypogyna]) HSP 1 Score: 240.0 bits (611), Expect = 6.300e-60 Identity = 133/202 (65.84%), Postives = 159/202 (78.71%), Query Frame = 0 Query: 1 MATRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVD-VGKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILE-----------DIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 M++ KIVKP GQ ADD + +VA EL LE+++ E KADLKDLYITAAK+VD VG +AIV+FVPF+LLK ++KIQ RLVRELEKKFSG HVV++AQRTILGK + RS T R RSRTL+AVQDAIL+ D+VYPTEIVGKRTRCK+DG+K LKV+LD KDQ+NV+ KL+TF VYKKLTNKEV F F V+Q Sbjct: 1 MSSAKIVKPAGQVADDFEKQVAQELAALENSSAEIKADLKDLYITAAKQVDVVGGRKAIVIFVPFRLLKSFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRSAHTSAPRARSRTLTAVQDAILDVRIFLARGISMDLVYPTEIVGKRTRCKLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKEVVFEFPVQQ 202
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_009836859.1 (hypothetical protein H257_11575 [Aphanomyces astaci] >ETV73433.1 hypothetical protein H257_11575 [Aphanomyces astaci]) HSP 1 Score: 234.6 bits (597), Expect = 2.600e-58 Identity = 127/189 (67.20%), Postives = 153/189 (80.95%), Query Frame = 0 Query: 3 TRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 T KIVKP GQ ADD + +VA EL LE++ E KADLKDLYITAAK+VDV G +AIV+FVPF+LLK ++KIQ RLVRELEKKFSG HVV++AQRTILGK + R R RSRTL+AVQD+IL+D+VYPTEIVGKRTR ++DG+K LKVFLD KDQ+NV+ KL+TF VYKKLT+K+V F F V+Q Sbjct: 6 TAKIVKPAGQVADDFEKQVAQELVALENSAAEIKADLKDLYITAAKQVDVPGGRKAIVIFVPFRLLKNFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHARGHNVSAPRARSRTLTAVQDSILDDLVYPTEIVGKRTRVRLDGSKLLKVFLDPKDQVNVETKLDTFATVYKKLTSKDVVFEFPVQQ 194
BLAST of NO18G00920 vs. NCBI_GenBank
Match: XP_008872303.1 (hypothetical protein H310_08370 [Aphanomyces invadans] >ETV98875.1 hypothetical protein H310_08370 [Aphanomyces invadans]) HSP 1 Score: 234.6 bits (597), Expect = 2.600e-58 Identity = 127/189 (67.20%), Postives = 153/189 (80.95%), Query Frame = 0 Query: 3 TRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDV-GKTQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 T KIVKP GQ ADD + +VA EL LE++ E KADLKDLYITAAK+VDV G +AIV+FVPF+LLK ++KIQ RLVRELEKKFSG HVV++AQRTILGK + R R RSRTL+AVQDAIL+D+VYPTEIVGKRTR ++DG+K LKV+LD KDQ+NV+ KL+TF VYKKLT+K+V F F V+Q Sbjct: 5 TSKIVKPAGQVADDFEKQVAQELVTLENSAAEIKADLKDLYITAAKQVDVPGGRKAIVIFVPFRLLKNFNKIQARLVRELEKKFSGRHVVIIAQRTILGKGHSRGHNVSAPRARSRTLTAVQDAILDDLVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTSKDVVFEFPVQQ 193
BLAST of NO18G00920 vs. NCBI_GenBank
Match: CCI10376.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 232.3 bits (591), Expect = 1.300e-57 Identity = 124/189 (65.61%), Postives = 152/189 (80.42%), Query Frame = 0 Query: 3 TRKIVKPKGQEADDTDLKVASELFQLESNNPEWKADLKDLYITAAKEVDVGK-TQAIVVFVPFKLLKVYHKIQQRLVRELEKKFSGSHVVLVAQRTILGKSYGRSTKTQGVRPRSRTLSAVQDAILEDIVYPTEIVGKRTRCKVDGTKTLKVFLDNKDQMNVDYKLETFKEVYKKLTNKEVEFTFFVKQ 191 T KIVKP+GQ D+ + +VA EL LE + E K +L+DLYITAAK+VDV +AIV+FVP++L+K + KIQ RL RELEKKFSG HVV +AQRTILGKSY RS K +G RPRSRTL AVQ++ILED+V+PTEIVGKRTRC +DGTK+LKV LD KDQ+NV+ KL+TF VYKKLTNK+V F F ++Q Sbjct: 4 TSKIVKPEGQFPDEFEQQVAQELQNLEGSAGELKNELQDLYITAAKQVDVASGRKAIVLFVPYRLMKAFRKIQIRLTRELEKKFSGRHVVFIAQRTILGKSYARSKKVKGPRPRSRTLKAVQESILEDLVFPTEIVGKRTRCLLDGTKSLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPMQQ 192 The following BLAST results are available for this feature:
BLAST of NO18G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00920 ID=NO18G00920|Name=NO18G00920|organism=Nannochloropsis oceanica|type=gene|length=2292bpback to top protein sequence of NO18G00920.1 >NO18G00920.1-protein ID=NO18G00920.1-protein|Name=NO18G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=194bpback to top Synonyms
Publications
|