NO18G00540, NO18G00540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO18G00540 vs. NCBI_GenBank
Match: XP_005852470.1 (hypothetical protein NGA_0727000 [Nannochloropsis gaditana CCMP526] >EKU23362.1 hypothetical protein NGA_0727000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 240.4 bits (612), Expect = 5.600e-60 Identity = 140/226 (61.95%), Postives = 151/226 (66.81%), Query Frame = 0 Query: 30 LERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMRDRGTEIHAGDMKSIGAN---------------------------------------------------GAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQPRNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRA 205 L R QVVE GATFKKRNFTLGGFALQTKKV+V VKQ+EG L YRQADDMR GTEI AGD+KSI AN GAKS+T++SKTGDVLLEIEAAEE QRDLWLTALNE LLHNFKV E+GVV GQPRN KERAEKE RR ++IELK+KSTEAKKAKFM+EAGGLKYTALHMA RA Sbjct: 8 LARIQVVESGATFKKRNFTLGGFALQTKKVFVRVKQEEGNCTLVYRQADDMRTAGTEIQAGDIKSIDANGQEGXXXXXXXXXXXXXXXXXGAGEQAHVLAWPFQWLDCVRAPSLLVCAYSGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKE----RRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 229
BLAST of NO18G00540 vs. NCBI_GenBank
Match: EWM23255.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 202.6 bits (514), Expect = 1.300e-48 Identity = 104/125 (83.20%), Postives = 113/125 (90.40%), Query Frame = 0 Query: 80 MRDRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQPRNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRA 205 MR GTEI AGD+KSI ANGAKS+T++SKTGDVLLEIEAAEE QRDLWLTALNE LLHNFKV E+GVV GQPRN KERAEKELYFQRR ++IELK+KSTEAKKAKFM+EAGGLKYTALHMA RA Sbjct: 1 MRTAGTEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 125
BLAST of NO18G00540 vs. NCBI_GenBank
Match: CBJ29356.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.1 bits (222), Expect = 9.300e-15 Identity = 57/181 (31.49%), Postives = 110/181 (60.77%), Query Frame = 0 Query: 27 QERLERR-QVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMRDRG-TEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQPRN-FKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRA 205 ++RL R +++ +G FK+R FT GF + V +K D ++ ++++ +D+ EI D+K++ G+ S+ + SKTGD+LLE+EA RD W+ +L +A+ + ++ + + ++ K++A+++ + +R E++ KK EA+KA++++E GG++YTAL MANR+ Sbjct: 22 RDRLRRHTELLRQGDLFKRRTFTF-GFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDIKTVEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESL-QAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 200
BLAST of NO18G00540 vs. NCBI_GenBank
Match: OQS04316.1 (hypothetical protein THRCLA_20913 [Thraustotheca clavata]) HSP 1 Score: 79.7 bits (195), Expect = 1.300e-11 Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 0 Query: 24 QETQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMRDRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQP-------RNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRA 205 Q T+E R ++ G F+++ +T G ++ +++ + Q+ +++L ++ + EI G +K+I +G I+S GDVLLE+EA E R W+TAL K G P + K++A K+ Y+ +R QE++ ++K E +K K A G+KYTA+ MANR+ Sbjct: 11 QATREHDARVTFLQEGGVFQRKKYTF-GLHTGSEAIHLQLHQESDEILLWTTESGGTKP--NEIEVGGIKAILPHGNTGFQILSMQGDVLLELEAETAEMRTQWVTALQFVCEEVQKEQERNGTQKKAPVTPTSLKQMVKDQANKQAYWHKRQQELKAREKEAEERKKKI--GASGMKYTAIAMANRS 193
BLAST of NO18G00540 vs. NCBI_GenBank
Match: OQR99743.1 (hypothetical protein ACHHYP_04650 [Achlya hypogyna]) HSP 1 Score: 76.3 bits (186), Expect = 1.400e-10 Identity = 57/188 (30.32%), Postives = 90/188 (47.87%), Query Frame = 0 Query: 24 QETQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMRDRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQP-------RNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRA 205 Q +E ER + G FK++ +T F L T ++++ E + A+ + EI G +K++ G S ++S GDVLLE++A E R W+TAL K G P + K++A K+ Y+ +R Q ELK++ EA++ K G+KYTA+ MANR+ Sbjct: 11 QAIREHDERLTFLREGGVFKRKKYT---FGLHTGTEAIHLQLHEASDEVLLWTAESSGAKPNEIEVGGIKAVLPQGPSSFQLLSMQGDVLLELDAESAELRTQWVTALQFVCEEVQKEQEANGTTKKAPVTPSSLKQMVKDQANKQAYWHKRQQ--ELKQREAEAEERKKKVGVAGMKYTAIAMANRS 193
BLAST of NO18G00540 vs. NCBI_GenBank
Match: XP_008608212.1 (hypothetical protein SDRG_04321 [Saprolegnia diclina VS20] >EQC38620.1 hypothetical protein SDRG_04321 [Saprolegnia diclina VS20]) HSP 1 Score: 74.3 bits (181), Expect = 5.300e-10 Identity = 59/192 (30.73%), Postives = 94/192 (48.96%), Query Frame = 0 Query: 24 QETQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMRDRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEE----------GVVLGQPRNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRAT 206 Q +E ER + G FK++ +T G + + V + + D +++L A + EI G +K++ S I+S GDVLLE+EA E R W+TAL +V SE+ + K++A K+ Y+ +R Q ELK++ EA++ K A G+KYTA+ MANR++ Sbjct: 11 QAIREHDERLTFLRLGGVFKRKKYTF-GISTGAEAVNLQLHPDSDEVLLWTSDAQATGAKPNEIEVGAIKAVTPMATTSFQILSMQGDVLLELEAESAEVRTAWVTALQFVC---EQVQSEQEANGSNKKGPATPTSLKQMVKDQAAKQAYWHKRQQ--ELKQRELEAEERKKKVGANGMKYTAIAMANRSS 196
BLAST of NO18G00540 vs. NCBI_GenBank
Match: XP_008862675.1 (hypothetical protein H310_01365 [Aphanomyces invadans] >ETW08870.1 hypothetical protein H310_01365 [Aphanomyces invadans]) HSP 1 Score: 74.3 bits (181), Expect = 5.300e-10 Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 0 Query: 24 QETQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVL--AYRQADDMRDRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQPRN-------FKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANR 204 Q +E ER + ++ G F ++ +T G T+ +++ + D +++L + +QAD + EI GD+KS+ +G I S GDVLLE++A E R W+TAL + G P + K++A K+ Y+ +R + ELK++ EA++ K G+K+TA+ MANR Sbjct: 11 QAIREHDERAKFLQAGGVFTRKKYTF-GLHTGTETIHLQLHADSDEILLWTSDKQADGAKP--NEIEVGDIKSVLPSGPTGFQIYSMQGDVLLELDAESAELRSEWVTALQWICEEVRRTQELNGTQKKHPASASSLKQMVKDQANKQAYWMKR--QTELKQRELEAEERKKKVGNVGMKFTAMAMANR 194
BLAST of NO18G00540 vs. NCBI_GenBank
Match: XP_012201628.1 (hypothetical protein SPRG_20398 [Saprolegnia parasitica CBS 223.65] >KDO27760.1 hypothetical protein SPRG_20398 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 74.3 bits (181), Expect = 5.300e-10 Identity = 61/194 (31.44%), Postives = 96/194 (49.48%), Query Frame = 0 Query: 24 QETQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVK--QDEGKLVLAYRQADDMRDRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEE----------GVVLGQPRNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANRAT 206 Q +E ER + G FK++ +T F L T VN++ D +++L + + EI G +K++ G S I+S GDVLLE+EA + R+ W+TAL +V SE+ + K++A K+ Y+ +R Q ELK++ EA++ K A G+KYTA+ MANR + Sbjct: 11 QAIREHDERLTFLRLGGVFKRKKYT---FGLHTGAEAVNLQLHPDSDEVLLWTSDSQATGAKPNEIEVGAIKAVTPVGTTSFQILSMQGDVLLELEAESADMRNAWVTALQFVC---EQVQSEQEANGSNKKGPATPTSLKQMVKDQAAKQAYWHKRQQ--ELKQREIEAEERKKKVGANGMKYTAIAMANRTS 196
BLAST of NO18G00540 vs. NCBI_GenBank
Match: OQR97944.1 (hypothetical protein ACHHYP_09449 [Achlya hypogyna]) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-7 Identity = 55/181 (30.39%), Postives = 87/181 (48.07%), Query Frame = 0 Query: 26 TQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMRDRGTEIHAGDMKSIG---ANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVVLGQPRNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANR 204 T ER R++++ G F +R + G ++KV+V + L L +A +R G + A + ++ A GA + + + G LLE+EAA+ E RDLW+ L E + H S L ++ +KE Y+ R E+ +K + ++KKA F GLKYTA M R Sbjct: 12 TSERRLRQELLREGNVFTRRASSFLGLLPTSEKVHVALTASYTLLELKSAEASALRLGGKKDSAVSLAAVAVVHAGGATGLVLFAADGSKLLELEAAQPEIRDLWVQTLRELVDHREPPES----TLHDELEKQKLQDKERYWAARTAELHARKAAADSKKAAFANV--GLKYTAQAMLQR 186
BLAST of NO18G00540 vs. NCBI_GenBank
Match: XP_002908217.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61300.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 66.2 bits (160), Expect = 1.400e-7 Identity = 59/184 (32.07%), Postives = 95/184 (51.63%), Query Frame = 0 Query: 24 QETQERLERRQVVERGATFKKRNFTLGGFALQTKKVYVNVKQDEGKLVLAYRQADDMR-DRGTEIHAGDMKSIGANGAKSITIISKTGDVLLEIEAAEEEQRDLWLTALNEALLHNFKVASEEGVV---LGQPRNFKERAEKELYFQRRHQEIELKKKSTEAKKAKFMREAGGLKYTALHMANR 204 Q QE +R V+++GA F ++ T+ G T+++Y VK DE L ++ D ++ R E+H+ ++ I A G TI S+ GD LL++EA EE R+ W+T L + + E V L + ++RA+K++Y+ +R QE+E G+KYTAL M+NR Sbjct: 12 QARQEGAQRLLVLQKGAYFMRKR-TILGMNTGTERIY--VKLDEDGHTLLWKLHDSIKGPRKIELHSVNL--IQAQGKIGFTITSQKGDTLLDVEADSEEIRESWVTHLQMVCEDSSPDSETEEEVQSGLKLRKMVEDRAKKQVYWTKRTQELEXXXXXXXXXXXXXXXV--GMKYTALAMSNR 188 The following BLAST results are available for this feature:
BLAST of NO18G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00540 ID=NO18G00540|Name=NO18G00540|organism=Nannochloropsis oceanica|type=gene|length=2255bpback to top protein sequence of NO18G00540.1 >NO18G00540.1-protein ID=NO18G00540.1-protein|Name=NO18G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top protein sequence of NO18G00540.2 >NO18G00540.2-protein ID=NO18G00540.2-protein|Name=NO18G00540.2|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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