NO17G02360, NO17G02360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02360 vs. NCBI_GenBank
Match: EWM23918.1 (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 288.5 bits (737), Expect = 5.500e-74 Identity = 134/234 (57.26%), Postives = 176/234 (75.21%), Query Frame = 0 Query: 164 VLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVALLIEKEWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAYHERLSPLSVLESKSDIRLHRHRV 398 +L S LT NA +IN ITL+ + MASAHVTG+VAR S L A Y + ++ F+ G+C G++++ ETFYLGRNY RALFL AA++G+ALL E + S++F++ C A GLQN LTSK+SG+ VRTTHLTGASTDLGIA+GHI+KGR EWWKVKLHG+A+ GFF GG+ G F + F+H ALL N+ +TTT A+ HTLY+AYHE +SP++VLESK+DIR+H+ R+ Sbjct: 102 ILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDVLYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLTEDSYPDSIFFIWLCAYACGLQNGLTSKFSGNAVRTTHLTGASTDLGIAMGHILKGRQGEWWKVKLHGVAVLGFFVGGILGFFTYRRFRHSALLFNIGITTTLAVAHTLYIAYHEGISPITVLESKTDIRMHKRRI 335
BLAST of NO17G02360 vs. NCBI_GenBank
Match: EWM24177.1 (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 255.8 bits (652), Expect = 3.900e-64 Identity = 137/213 (64.32%), Postives = 152/213 (71.36%), Query Frame = 0 Query: 80 GPSSSRTIARPKHPAAASLQRRPTPLLSHYQQXXXXXXXXXXXTPKALAHKPPHNATTNTNKRLGQGGKPAPPLPPHLSSSWPWVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVALLIEKEWDSSVYFVYACCLAMGLQNSLTSKYSG 293 G S TI R KHPAAA+LQ RPT ++H + TPK + K+ G KP+P PPHL+SSWPWVLFGSLTLT NAGYIN ITLHNLH + SAHVTG+VAR SNL A ++ S Y VAY CF+ GACMGGLLISHETFYLGRNYARALFLTAAIQGVAL+IE WD SVYF+YACCLAMGLQNSLTSKY G Sbjct: 112 GLSPPLTILRAKHPAAAALQHRPTTTVAHGHR-------SPSPTPKXXXXXXXXXXXXH-GKKPATGNKPSP--PPHLTSSWPWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
BLAST of NO17G02360 vs. NCBI_GenBank
Match: EWM24629.1 (hypothetical protein Naga_100117g18 [Nannochloropsis gaditana]) HSP 1 Score: 218.4 bits (555), Expect = 6.900e-53 Identity = 112/233 (48.07%), Postives = 154/233 (66.09%), Query Frame = 0 Query: 164 VLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVALLIEK----EWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAYHERLSPLSVLESKSDIRL 393 +LFGS L FNA ++N +T + +A+AHVTG+VAR S IA + + CF++G+ +GG +SHETFYLGR+Y RAL A +QG AL++ K E Y++Y C +AMGLQNSLTSKYSG+ +RTTH+TGA+TDLGIA+GH++KGR + WKVKLH AI GF GGV G A+ F+ ALL NV + T L H L+++ + LS V +S +D+++ Sbjct: 65 LLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKV 297
BLAST of NO17G02360 vs. NCBI_GenBank
Match: WP_011111229.1 (DUF1275 domain-containing protein [Nitrosomonas europaea] >CAD84514.1 possible transmembrane protein [Nitrosomonas europaea ATCC 19718] >KXK41404.1 transmembrane protein [Nitrosomonas europaea] >SDW04338.1 Uncharacterized membrane protein YoaK, UPF0700 family [Nitrosomonas europaea] >SES68134.1 Uncharacterized membrane protein YoaK, UPF0700 family [Nitrosomonas europaea] >SJZ31064.1 Uncharacterized membrane protein YoaK, UPF0700 family [Nitrosomonas europaea]) HSP 1 Score: 137.1 bits (344), Expect = 2.000e-28 Identity = 81/202 (40.10%), Postives = 117/202 (57.92%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVALLIEKEWDSSV--YFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTT 363 WV G L+FNAGY+N I L H A +H+TG+ +S +A + + FI+GA G +I + LGRNY+ AL + + G+++L+ + S V YF A C GLQN++TS YSG+VVRTTH++G TDLG+ALG ++G+ + ++ L+ I I GF GGVAG F ++ A+LV VTT Sbjct: 8 WVEIGGFLLSFNAGYVNAIGLLGFEHQAVSHLTGISTFLSLELANHNMQAVVHLLLVMAGFIIGAAYSGFIIGNVALKLGRNYSLALITESFLLGISMLL-LNYGSPVGHYFASAAC---GLQNAMTSTYSGAVVRTTHVSGLFTDLGVALGLRVRGQPADTRRIVLYLILIIGFISGGVAGAVCFGQYRFSAILVPCIVTT 205
BLAST of NO17G02360 vs. NCBI_GenBank
Match: PAW68224.1 (hypothetical protein B9S34_03200 [Opitutae bacterium Tous-C1TDCM]) HSP 1 Score: 134.0 bits (336), Expect = 1.700e-27 Identity = 74/213 (34.74%), Postives = 111/213 (52.11%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVAL-LIEKEWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAY 375 WVLFG LTFNAG IN + + H H+TG + + + E Y + F+ GA + G+LI T LGR Y AL + +A+ +A+ +++ + Y A C GLQN++ S YSG+VVRTTH++G TDLGI LGH+++ + +W +++L G + F GG G AF + L + +T + LY Y Sbjct: 8 WVLFGGAVLTFNAGMINAVGFLSFTHQGVTHLTGTTTLFGIAVGLGQRDEAGHYLALIAAFVAGATVSGILIRDSTLRLGRRYGAALLVESALLVLAVHFLQRGNAAGDYLASAAC---GLQNAMASTYSGAVVRTTHVSGIFTDLGIFLGHLLRRMAVDWRRIRLWGAQLLAFSGGGAVGALAFARLNYATLYLPALLTAGAGAGYGLYQTY 217
BLAST of NO17G02360 vs. NCBI_GenBank
Match: WP_028915419.1 (DUF1275 domain-containing protein [Pseudoxanthomonas sp. J31]) HSP 1 Score: 133.7 bits (335), Expect = 2.200e-27 Identity = 76/218 (34.86%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAA--IQGVALLIEKEWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAYHERL 379 WV G++TL AG +N + H+A +HVTG ++ +A + + F LGA + GL+I T LGR Y AL L AA + + L + ++ + ++ AC GLQN++ + YSG+VVRTTHL+G TDLGI LGH+++G ++ L G+ I GF CGG+ G + F F + AL + +T + + +Y + RL Sbjct: 8 WVWVGAITLAGIAGMVNAVGFLGFEHLAVSHVTGTTTQLGTALADGNWRGVRHLWAVLIAFSLGAMLSGLIIQDSTLRLGRRYGVALALEAALLLAAIPLFLRQQLNGALLAAMAC----GLQNAMVTTYSGAVVRTTHLSGMFTDLGIGLGHLLRGLPLPMRRLTLSGLIISGFLCGGILGTWGFRAFGYHALAIPAALTGATGIGYVIYRNHALRL 221
BLAST of NO17G02360 vs. NCBI_GenBank
Match: WP_091054670.1 (DUF1275 domain-containing protein [Opitutus sp. GAS368] >SDR66005.1 Uncharacterized membrane protein YoaK, UPF0700 family [Opitutus sp. GAS368]) HSP 1 Score: 133.7 bits (335), Expect = 2.200e-27 Identity = 76/228 (33.33%), Postives = 116/228 (50.88%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVALLIEKEWDSSVYFV--------YACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAYHERLSPLS 383 WV G L L AG IN + +HH A +H++G V + + + + F LG + G LIS LGR Y AL +++ AL + +VYF+ Y +A GLQN++ S YSGS +RTTH+TG TDLGIA GH ++G + +W++ +L+G+ + GFF GG+ G +E + + LL ++ + +T Y Y +P S Sbjct: 10 WVYLGGLALAITAGVINAVGFLGVHHQALSHMSGTVTLLGMELGRGNYAVALHALAILAAFFLGCLVSGALISQGRLRLGRRYGVAL----SLESTALFL------AVYFLRRGANAGDYLAAMACGLQNAMVSSYSGSTMRTTHMTGMVTDLGIACGHFLRGATVDWFRFRLYGVLLLGFFAGGMTGALGYERYGYDTLLFPAILSGMTGVGYTAYKHYERHHAPPS 227
BLAST of NO17G02360 vs. NCBI_GenBank
Match: WP_013534708.1 (DUF1275 domain-containing protein [Pseudoxanthomonas suwonensis] >ADV26878.1 protein of unknown function DUF1275 [Pseudoxanthomonas suwonensis 11-1]) HSP 1 Score: 133.3 bits (334), Expect = 2.900e-27 Identity = 76/218 (34.86%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAA--IQGVALLIEKEWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAYHERL 379 WV G+++L AG +N + HMA +HVTG ++ +A ++ + F LGA + GL+I T LGR Y AL L AA + + L ++ + ++ AC GLQN++ + YSG+VVRTTHL+G TDLGI LGH+++G ++ L G+ I GF CGG+ G + F F + AL + +T + + +Y + RL Sbjct: 8 WVWVGAISLAGIAGMVNAVGFLGFEHMAVSHVTGTTTQLGTALADGDWRSVRHLWAVLIAFSLGAVLSGLIIQDSTLRLGRRYGVALALEAALLLAAIPLFQRQQLNGALLAAMAC----GLQNAMVTTYSGAVVRTTHLSGMFTDLGIGLGHLLRGLPMPMRRLTLSGLIISGFLCGGILGTWGFRAFGYHALAIPAALTGATGIGYVIYRNHALRL 221
BLAST of NO17G02360 vs. NCBI_GenBank
Match: WP_038166665.1 (DUF1275 domain-containing protein [Verrucomicrobium sp. BvORR106]) HSP 1 Score: 127.9 bits (320), Expect = 1.200e-25 Identity = 77/216 (35.65%), Postives = 112/216 (51.85%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVAL-LIEKEWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLYVAYHER 378 WV G+ L AG +N + + H A H+TG + ++ IA F+LGA + G++I T LGR Y AL L A + A+ L++ D+ Y C GLQN++ + YSGSV+RTTHL+G TDLGI LGH ++G + ++++ + I GFFCGG+AG AF + + AL VT L + LY E+ Sbjct: 8 WVGTGAWALAMVAGMVNVVGFLSFEHQAVTHLTGTTSMLAAAIAEGNTSGALHLAAVAGSFLLGAVLSGMIIQDSTLKLGRRYGVALVLEALMLAAAVPLLQAHRDAGAYLASCAC---GLQNAMATTYSGSVIRTTHLSGMFTDLGIFLGHAVRGLPVDGRRLRIALLIITGFFCGGIAGALAFHRWSYPALYFPATVTGAAGLGYGLYKLRREK 220
BLAST of NO17G02360 vs. NCBI_GenBank
Match: WP_043290251.1 (DUF1275 domain-containing protein [Pseudoxanthomonas spadix]) HSP 1 Score: 127.9 bits (320), Expect = 1.200e-25 Identity = 73/209 (34.93%), Postives = 112/209 (53.59%), Query Frame = 0 Query: 163 WVLFGSLTLTFNAGYINGITLHNLHHMASAHVTGMVARMSNLIAIREFGEFSAYFVAYSCFILGACMGGLLISHETFYLGRNYARALFLTAAIQGVALLIEKEWDSSVYFVYACCLAMGLQNSLTSKYSGSVVRTTHLTGASTDLGIALGHIMKGRSEEWWKVKLHGIAIFGFFCGGVAGHFAFETFQHGALLVNVCVTTTCALIHTLY 372 WV G+ L AG +N + L H A +H+TG + + +A + + + F+ G+ + G LI T LGR Y AL L + + ++ + + +S Y +YA A GLQN++ S YSG+VVRTTH++G TDLGI LGH ++G + ++ L + I GF CGG+ G FAF F + AL +T A+ + +Y Sbjct: 8 WVWTGAWVLAAIAGMVNVVGLLGFEHQAISHLTGNTSLLGEALAAHDLAGVLHFALLIGAFVAGSTLSGFLIQDSTLQLGRRYGVALLLVSLLLFASVPLLQL--NSAYGMYAAACACGLQNAMVSTYSGAVVRTTHVSGMFTDLGIFLGHALRGLPVDIRRLTLCLLVISGFLCGGILGTFAFHAFGYRALFFPAGLTAVVAISYGVY 214 The following BLAST results are available for this feature:
BLAST of NO17G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02360 ID=NO17G02360|Name=NO17G02360|organism=Nannochloropsis oceanica|type=gene|length=3452bpback to top protein sequence of NO17G02360.1 >NO17G02360.1-protein ID=NO17G02360.1-protein|Name=NO17G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=688bpback to top Synonyms
Publications
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