NO17G01160, NO17G01160 (gene) Nannochloropsis oceanica

Overview
NameNO17G01160
Unique NameNO17G01160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1790
Alignment locationchr17:367945..369734 -

Link to JBrowse

Properties
Property NameValue
DescriptionAmino acid transporter, transmembrane
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:367945..369734 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO17G01160 vs. NCBI_GenBank
Match: EWM24318.1 (Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 495.0 bits (1273), Expect = 2.700e-136
Identity = 281/457 (61.49%), Postives = 336/457 (73.52%), Query Frame = 0
Query:   41 QQRQTAAKHAINVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQHQQ-----QHRPAVETYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIFFGLVTLPLICLCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLL-GEDVDTSSPYFFPGGSSLLAHDGYGALHFSPSLADAAPAAAVGTALGRRNIR-AATYLGVRVGVVLFTSIVAYLLPEFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIGAGHALHDLIYGQSQC 491
            ++RQ AAKH+INVLKSF+GSN+LS+PFA AAAGSL GPL +A+IA +SG GCLLLV+IR DL +  QH+Q          VETYAQVAG +LG  GYY+VE FLILTQ GYCIGYVIYMSTA+ QF G SLS   I FGL+   L+CLCL+PDLKHFLPF+F SN+ALL+GFLA++ A +S AR  G F ++WG+ D  K+PLAFGNIVASFEGIGTILSVEGSMA+DQ R  YP LL++TLLLVT+LFS FGIVG GA+G+ELCSV+L N+  G  AD AR  LIVGLF TYGFQMYPV++MIDLRL   E  D +S   F   S LL      +L  S          + G  L R  ++  A Y+GVRVG+VL TSI+AY +PEFELLVAL+GS+G GMLAF++PGILG  +Y+ +A    K  Y  LI  GVVGG IGA +ALHDLI G SQC
Sbjct:   21 KKRQRAAKHSINVLKSFLGSNYLSIPFAVAAAGSLFGPLLIAIIAFISGFGCLLLVRIRKDLLR--QHRQIDVNGDGTCVVETYAQVAGVVLGSAGYYVVEAFLILTQAGYCIGYVIYMSTALRQFTGASLSQQVITFGLLFPSLVCLCLVPDLKHFLPFSFASNIALLMGFLAIIAACISHARAIGTFDLSWGISDIHKIPLAFGNIVASFEGIGTILSVEGSMAKDQSRETYPPLLRKTLLLVTLLFSLFGIVGLGAYGEELCSVILNNISRGAYADAARGCLIVGLFFTYGFQMYPVFEMIDLRLFPNEGPDHAS---FSEVSPLLTTGDNHSLDIS--------WESCGNDLRRHRMKMTAKYVGVRVGLVLTTSIIAYFVPEFELLVALIGSVGAGMLAFVVPGILGLVLYRNSALFYHKLSYISLIILGVVGGSIGAAYALHDLIQGHSQC 464          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: OSX79448.1 (hypothetical protein BU14_0076s0005 [Porphyra umbilicalis])

HSP 1 Score: 159.5 bits (402), Expect = 2.700e-35
Identity = 140/486 (28.81%), Postives = 232/486 (47.74%), Query Frame = 0
Query:   52 NVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQH-----------------------QQQHRPAVE----TYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIFFGLVTLPLIC-LCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGV--VDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRL--------LGEDVDTSSPYFFPGGSSLLAHD-------GYGALHFSPSLADAAP---------AAAVGTALGRRN-------IRAATYLGVRVGVVLFTSIVAYLL-PEFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIG 476
            N+LK+FIG N +   +AF+ AG + G + + ++  ++   CLLL+ ++  L     H                       +    P  E    TYA +AGA+LG  G   V   L+LTQ GYC+GY+I+MS  +H     + S V+ +  LV LPL+  L L+  ++   PF+ L+N+AL+ G +AV++      R        W         LPL FG + A+ EGIG ++ VE SM R      +  +L+  L ++T++ +  G++GF  FG++  S++L N+       + ++ L+VG+  TY  Q+ PV Q ++  +        L  +  ++SP   P  +S+ A +       G   L+  P    AAP         A+++ T  G  N       +  A  +  R  +V  T++VA L    F L  +LVGS+G   LA+ +P +L   +Y  T     + +   ++AFG+ G V+G
Sbjct:   59 NMLKAFIGLNVMYTSYAFSKAGLIRGIVGLLIVTYLTEHCCLLLIDVKNGLPASALHXXXXXXXXXXXXXXXXXXXTVGAESMDDPHGEGGGYTYADIAGAVLGPAGDAFVSASLVLTQFGYCVGYLIFMSQTVHDLVASAGSPVWAYV-LVPLPLLAGLSLLRSIRSLGPFSMLANLALMAGVVAVIVYIGDHFR--------WAPSHPSLASLPLFFGQMTAAIEGIGLVVPVESSMRRP---SEFAGVLRSALAVLTVVLAVVGVLGFVTFGEDTRSIILLNMKGSALVSIVKIVLVVGILFTYPLQLVPVIQALETWMESDSPFEPLSPNSSSTSPAESPRQTSITAEELEEEGLGGSRGLNGQPGGEYAAPTGGAPLPAAASSLATLGGAENSGRPGVFVSDARRVLGRFLIVAGTAVVAMLAGASFGLFQSLVGSLGAATLAYTVPSMLHLKLYGNTLPWHVRIKDYAILAFGLGGAVLG 532          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: OSX79449.1 (hypothetical protein BU14_0076s0005 [Porphyra umbilicalis])

HSP 1 Score: 157.9 bits (398), Expect = 7.900e-35
Identity = 144/488 (29.51%), Postives = 232/488 (47.54%), Query Frame = 0
Query:   52 NVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQH-----------------------QQQHRPAVE----TYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIFFGLVTLPLIC-LCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGV--VDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRL--------LGEDVDTSSPYFFPGGSSLLAHD-------GYGALHFSPSLADAA--------PAAAVGTAL-------GRRNI---RAATYLGVRVGVVLFTSIVAYLL-PEFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIG 476
            N+LK+FIG N +   +AF+ AG + G + + ++  ++   CLLL+ ++  L     H                       +    P  E    TYA +AGA+LG  G   V   L+LTQ GYC+GY+I+MS  +H     + S V+ +  LV LPL+  L L+  ++   PF+ L+N+AL+ G +AV++      R        W         LPL FG + A+ EGIG ++ VE SM R      +  +L+  L ++T++ +  G++GF  FG++  S++L N+       + ++ L+VG+  TY  Q+ PV Q ++  +        L  +  ++SP   P  +S+ A +       G   L+  P    AA        PAAA   A        GR  +    A   LG R  +V  T++VA L    F L  +LVGS+G   LA+ +P +L   +Y  T     + +   ++AFG+ G V+G
Sbjct:   59 NMLKAFIGLNVMYTSYAFSKAGLIRGIVGLLIVTYLTEHCCLLLIDVKNGLPASALHXXXXXXXXXXXXXXXXXXXTVGAESMDDPHGEGGGYTYADIAGAVLGPAGDAFVSASLVLTQFGYCVGYLIFMSQTVHDLVASAGSPVWAYV-LVPLPLLAGLSLLRSIRSLGPFSMLANLALMAGVVAVIVYIGDHFR--------WAPSHPSLASLPLFFGQMTAAIEGIGLVVPVESSMRRP---SEFAGVLRSALAVLTVVLAVVGVLGFVTFGEDTRSIILLNMKGSALVSIVKIVLVVGILFTYPLQLVPVIQALETWMESDSPFEPLSPNSSSTSPAESPRQTSITAEELEEEGLGGSRGLNGQPGGEYAALATGGAPLPAAASSLATLGGAENSGRPGVFVSDARRVLG-RFLIVAGTAVVAMLAGASFGLFQSLVGSLGAATLAYTVPSMLHLKLYGNTLPWHVRIKDYAILAFGLGGAVLG 533          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: CEM39819.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 156.8 bits (395), Expect = 1.800e-34
Identity = 134/459 (29.19%), Postives = 220/459 (47.93%), Query Frame = 0
Query:   39 DTQQRQTAAKHAINVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQHQQQHRPAVETYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIF--FG---LVTLP-LICLCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLLGEDVDTSSPYFFPGGSSLLAHDGYGALHFSPSLADAAPAAAVGTALGRRNIRAATYLGVRVGVVLFTSIVAYLLPEFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIG----AGHALHDLIYGQ 488
            D ++    AK  +N   +FIG+  L +P+AF+ +G LLG   ++L+A V+ L C+LL+   +D +  L +++     ++TY  +     G+ G  +VEVFL++TQ G+CI Y+I        F GE+L+ V+ F  FG   +  LP L+ LC + D++H    + L++   L G   V    + R            +  +  LP  FG  +  FEGIG +L +E SM   Q   ++  L    +LLVT LF +FG++G+ AFG +   +V  NLP  V + + R AL +GLF TY   + PV+++++  L  +                                       VGT   + N+       +R  +V+ T +V+  +P F + ++LVGS     LAF++P +    +  +     +  R    IA GV G V+G    A H +H L+ G+
Sbjct:  197 DEKKGTGLAKTELNAFIAFIGAGILDLPYAFSQSGVLLGTAFLSLLA-VTALHCMLLL---VDCKYYLMNERHKN--IKTYGDIGWHAFGKTGSVVVEVFLVITQTGFCIAYLI--------FIGENLANVFHFVSFGEIVMYCLPLLVLLCWLRDMRHLAWSSLLADATNLFGLGVVYFFDLHRLVAVRKAPPAVAIARSSTLPFFFGVGLYCFEGIGMVLPIENSMKDKQ---HFKKLWSLNMLLVTTLFISFGLLGYCAFGSDTDEIVTHNLPHNVISVLVRGALSLGLFLTYPIMLVPVFEILEETLCKDQ------------------------------------RLVGTCSWKGNL-------LRASLVVLTGMVSVAVPNFNIFISLVGSSASTCLAFLLPALFHLKLRWDELRSWQVVRECLCIALGVGGAVLGTTHSAAHLIHLLVSGE 595          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: XP_020627998.1 (amino acid transporter ANTL1-like [Orbicella faveolata])

HSP 1 Score: 146.7 bits (369), Expect = 1.800e-31
Identity = 138/506 (27.27%), Postives = 233/506 (46.05%), Query Frame = 0
Query:   52 NVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIR--------------IDLQQRLQHQQQHRPAVE---TYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAI----------------------------HQFAGESLSLVYI----------FFGLVTL----PLICLCLIPDLKHFLPFAFLSNVALLVGFLAVL--IASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLLGEDVDTSSPYFFPGGSSLLAHDGY-----------GALHFSPSLADAAPAAAVGTALGRRNIRAATYLGVRVGVVLFTSIVAYLL-PEFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIGAGHALHDLI 485
            NV K+FIG+N++ +PFAF  +G +LG + V +IA ++   C L+++ +               D++ +  +  Q R  VE    + ++    LG+ G  LV V L+ TQ G+CIGY I+M   I                               A  + S + +           FGL+ L    PLI    I  ++   P +F +NVALLV F++V+  + S  + + + +    W       LP+ FG + +++EGIGT++ +E SMA +  R  +PL L   +  ++++   FGI+G+  +G+E+  +V  + P GV   V R  L   +  TY  Q++PV ++I+  L   + +        G SS    D              A   S  LA   P         ++N+       +R  +VL T+ +A  L  +F  + A+VGSIG   L FI+P +    + K+++T   + +    IAFG++GGVIG    +  ++
Sbjct:   32 NVFKAFIGTNWIGLPFAFKQSGIVLGVVGVLIIALITDHCCQLIIKCKKXAVQKVLDIVPQSKDVEAQNVNTTQIRNTVEKRMLFGEIGRIALGKWGVLLVNVALLATQYGFCIGYFIFMGNTITSMFPTTTETYTTHPIATTSPAERNSSNGSLANMNSSTILVGRSHLVNHAPAFGLLILVPLIPLILFSYIRSVRKLGPVSFAANVALLVAFVSVVGYMLSGLKFKLKELKLSHWAT-----LPVFFGQVTSAYEGIGTLIPIETSMAEN--RNRFPLYLHFAIGTLSVILGCFGILGYVVYGEEVNQIVTESFPSGVLIQVVRCLLCFAILLTYPLQIFPVIEIIEGWLFSSECNPVEK--SDGESSSEVEDNVTCQMSQEAMLGSARETSRLLAPEIPKQKSIARKWKKNL-------LRTFLVLTTAGIAIALKDDFAYVSAIVGSIGSSTLGFILPCVFHLVLCKDSSTTLTRVKDCLFIAFGILGGVIGVAVTIQQIV 521          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: XP_009537183.1 (hypothetical protein PHYSODRAFT_352935 [Phytophthora sojae] >EGZ07617.1 hypothetical protein PHYSODRAFT_352935 [Phytophthora sojae])

HSP 1 Score: 141.7 bits (356), Expect = 5.900e-30
Identity = 124/435 (28.51%), Postives = 208/435 (47.82%), Query Frame = 0
Query:   48 KHAINVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQHQQQHRPAVETYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIFFGLVTLPLICLCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLP-MGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLLGEDVDTSSPYFFPGGSSLLAHDGYGALHFSPSLADAAPAAAVGTALGRRNIRAATYLGVRVGVVLFTSIVAYLLPEFELLVALVGSIGGGMLAFIMPGILGWAMYKE---TATRKEKGRYGC-LIAFGVVGGVIGAG 478
            K  IN   +F+GS  L +P+AF   G L+G + +  +A+VS    +L+VQ +  L+Q+ ++       V  Y ++    +G+ G  LV   L+++Q G+CI Y+I++ST  H+F   S  LV     +   PLI   L+  +K     A L++   ++G L VL   +             GVV A  +P  FG     FEG+G +L +E SM     R + P+L+  T++++T L++ FGI G+ AFG +  +V+  N    G    + ++ L +GLF TY   ++PV++++                                          P  A G  L    I     + +R GVVLFT+++A  +P+F   ++ +GS    +LAFIMP      ++++   T  R+    + C ++A GVV  ++GAG
Sbjct:   63 KTFINTCIAFLGSGVLGLPYAFRRCGVLVGFVTLVGVAAVSTYAMMLVVQCKYKLKQQGKN-------VTKYGEIGFFAMGQFGSTLVNSALVISQTGFCIAYLIFISTNAHKFLDVSKQLV---VSVCVPPLIGFSLLKHMKELAYVALLADFMCILGLLVVLNIDLGYMEQDHDNIEAIGVVSA--VPFFFGVASYCFEGVGMVLPLENSM--QNKRNFTPILV-CTVVIITALYATFGICGYLAFGDDTDAVITLNFEGSGGLVTLVKIFLCLGLFFTYPVMLFPVFEVLQ-----------------------------------------PMVACGNKLEDSRITERKGVLLRAGVVLFTAVIAAAIPDFGRFISFIGSTCCSLLAFIMPAYFHLRLFRDEPATLGRRLNQSFLCGMMALGVV--MLGAG 439          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: XP_015768245.1 (PREDICTED: proton-coupled amino acid transporter 1-like [Acropora digitifera])

HSP 1 Score: 139.4 bits (350), Expect = 2.900e-29
Identity = 131/494 (26.52%), Postives = 223/494 (45.14%), Query Frame = 0
Query:   52 NVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIR----------------IDLQQRLQHQQQHRPAVE---TYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAI---------------------------------HQFAGESLSLVYIFFGLVTLPLICLCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDARK---LPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRL--------------LGEDVDTSSPYFFPGGSSLLAHDGYGALHFSPSLADAAPAAAVGTALGRRNIRAATYLGVRVGVVLFTSIVAYLLP-EFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIG 476
            NV K+FIG+N++ +PFAF  +G +LG + + +IA V+   C L+++ +                 D++ +L      R  VE    Y  +A   +G+ G  LV + L+ TQ G+C+GY I+M   I                                 H       +L+ +   +  LPLI    I  ++   P +F++N+AL V FL+V+   ++       F   W  +   +    P+ FG + +++EGIGT++ +E SMA  + R  +PL L   +  ++ + + FG++G+  +G+E+  +V  +   G    V +  L   +  TY  Q+ P+ ++++  L              L  D+ TSS        S +          S  LA   P         ++N+       +R  +VL T+ +A  L  +F  + A+VGS+G   L FI+P +    + KET TR  K +   LIAFG+VGGV+G
Sbjct:   29 NVFKAFIGTNWIGLPFAFKESGFVLGLVGILVIAVVTDHCCQLVIKCKRAAVQKVLDTVCLSDVTDVESQLTQAALLRDTVEKRMQYGDIARIAMGKWGVLLVNMALLATQYGFCVGYFIFMGNTIVSMFTTVSSVPSTLHNGSASNVTSPSNVASSPSHSHQAPPFALIVL---IPLLPLILFSYIRGVRRLGPISFMANIALFVAFLSVIGYMLNG------FKFKWHEMKLARWATFPVFFGQVTSAYEGIGTLIPIETSMAESKHR--FPLYLHFAIGGLSAILACFGMLGYLVYGEEVAQIVTRSFHPGPLVLVVQCLLCFAILLTYPLQLVPIIEIVESWLFKSEAKNAITTESSLNNDLSTSSDDVM---ISQVDTKSVTVNECSRLLAPEIPKEKSRLRQWKKNL-------LRTFLVLSTAGIAIALKRDFAFVSAIVGSVGSSTLGFILPCVFHLVLCKETNTRLIKAKDCLLIAFGLVGGVVG 501          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: XP_020899768.1 (amino acid transporter ANTL1-like isoform X1 [Exaiptasia pallida])

HSP 1 Score: 133.7 bits (335), Expect = 1.600e-27
Identity = 127/502 (25.30%), Postives = 228/502 (45.42%), Query Frame = 0
Query:   52 NVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQHQQQHRPAVE-------------------TYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAI--------HQFAGE----------------SLSLVYIFFGLVTLP-LICLCLIP-----------DLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDAR--KLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLLGEDVDTSSPYF--FPGGSSLLAHDGY-------GALHFSPSLADAAPAAAVGTALGRRNIRAATYLGVRVGVVLFTSIVA---YLLPEFELLVALVGSIGGGMLAFIMPGILGWAMYKETATRKEKGRYGCLIAFGVVGGVIGAGHALHDLI 485
            NVLK+FIG+++LS+PFAF  +G  LG + + +IA+++   C ++++ +I     +    QH   +E                   T   +    +G+ G  +V + LILTQ G+C+ Y I++   +        H+ + +                S  LV +  G  T P  + L LIP            ++   P + ++NVA+L GF+A+L   +     +G+ +    V  A     P+ FG +  +FEGIG I+ +E SM  ++ R  +PL L   L  V+++  +FG++G+  +G E+  +V   L   + + + RV LIV +  TY  Q+ PV ++ +  + G+       +      G S+  + G        G+        D   A+    A      +  T+    +  +L T+  A   +L  EF  + A +GS+G  +LA+I+P      +++ T T     +   LI FG++GG++G    +  +I
Sbjct:   28 NVLKAFIGTSYLSLPFAFKQSGLALGIVTLVIIAAITDHCCQMIIKCKIMAVDLILESSQHYKELENEECYEEMRKLREEVEQEMTLGDIGLIAIGKWGIRIVNIALILTQTGFCVAYFIFIGNTLKDMFPIKMHKLSDKQNVTISYTMNSEQLRNSTPLVSLLIGQGTAPAFVLLLLIPFPFLVLMSFVRYVRKLGPISGVANVAILAGFIALLSHVL-----KGLHFKLDEVTQANWITFPIFFGQLTCAFEGIGCIIPIESSMGSNRPR--FPLYLHLVLCQVSVVLGSFGVLGYLVYGSEVPQIVTNTLTGDIFSQIIRVTLIVAVLFTYPLQLVPVXRITEDLVFGKRGKKKKSHLSELVAGHSMEKNPGSINYPNIDGSHESQNHETDPILASTEERAEQPFVYKKLTWKRNVIRTILVTATAALALFLKDEFAYVNAFIGSMGSSVLAYILPCAFHLVLFRNTNTGFVVIKNIALILFGIIGGIVGVVMTVRTII 522          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: XP_005535906.1 (similar to amino acid transporter protein [Cyanidioschyzon merolae strain 10D] >BAM79620.1 similar to amino acid transporter protein [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 133.3 bits (334), Expect = 2.100e-27
Identity = 92/315 (29.21%), Postives = 159/315 (50.48%), Query Frame = 0
Query:   52 NVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQHQQ--------QHRPAVET-----------------YAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIFFGLVTLPLI-CLCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMID 341
            N+LK F+G NFL V +AF+ AG   G L + L++ ++  GC+LLV+++  +      +Q        +  P  E                  Y  V     GR G  +V + L+LTQ GYC GY+I+++  IH            +F L+ LP++  L L+  ++   PF++L+N+ + VGF AVL+  ++  + +    + W      K P+ FG + A+ EGIG +L VEGSM   +    + ++L  T++L+  +    G++GF  FGK+  S++L N+       + +    +G+  TY  Q+ P+ Q ++
Sbjct:   67 NLLKGFLGLNFLYVSYAFSYAGVTRGILGLVLVSLLTFYGCVLLVRVKRHIPAEWWQRQRGGTEPGSERAPFAEVSSDSPGAASCVPARQVLYGDVGAYAFGRAGELVVNLALLLTQFGYCTGYLIFLAQTIHDLT--RCDCAPAWFLLIPLPIVLTLALLRSVRKLTPFSYLANIGIFVGFSAVLVFLMANFQYRPYSPLFW------KWPVFFGQMSAALEGIGVVLPVEGSMKNPR---RFNVILSATMVLMGAILLLIGLLGFMTFGKQTRSIILLNMGHSAAVRIVKSVACIGILFTYPLQLVPIVQALE 370          
BLAST of NO17G01160 vs. NCBI_GenBank
Match: XP_002904113.1 (Amino Acid/Auxin Permease (AAAP) Family [Phytophthora infestans T30-4] >EEY54291.1 Amino Acid/Auxin Permease (AAAP) Family [Phytophthora infestans T30-4])

HSP 1 Score: 130.6 bits (327), Expect = 1.400e-26
Identity = 121/448 (27.01%), Postives = 205/448 (45.76%), Query Frame = 0
Query:   40 TQQRQTAAKHAINVLKSFI-------GSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRIDLQQRLQHQQQHRPAVETYAQVAGALLGRPGYYLVEVFLILTQVGYCIGYVIYMSTAIHQFAGESLSLVYIFFGLVTLPLICLCLIPDLKHFLPFAFLSNVALLVGFLAVLIASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGIGTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELCSVVLTNLP-MGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLLGEDVDTSSPYFFPGGSSLLAHDGYGALHFSPSLADAAPAAAVGTALGRRNIRAATYLGVRVGVVLFTSIVAYLLPEFELLVALVGSIGGGMLAFIMPGILGWAMYK-ETATRKEKGRYGCLIAFGVVGGV-IGAG 478
            T +   AA H  + LKSFI       GS  L +P+AF   G L+G + +  +A+VS    +L+VQ +  L+Q+          V  Y ++    +G+ G  +V   L+++Q G+CI Y+I++++  H+F   S  LV     +   PLI   L+  ++     A L++   ++G L VL   +        +    GVV A  +P  FG     FEG+G +L +E SM       + P+L+  T++++T L++ FGI G+ AFG +  +V+  N    G    + +V L +GLF TY   ++PV++++                                          P  A G  L          + +R GVVL T+++A  +P+F   ++ +GS    +LAFI+P      ++  E +T   + R   L    ++G V +GAG
Sbjct:   56 THEHAEAALHLTSDLKSFINTCIAFLGSGVLGLPYAFRKCGILVGFVTLVGVAAVSTYAMMLVVQCKYKLKQQ-------GKTVTKYGEIGYFAMGQMGSAIVNTALVISQTGFCIAYLIFIASNAHKFLDVSKQLV---VSVCVPPLIGFTLLRHMRELAYVALLADFMCILGLLVVLNIDLGYMDINHDYIEPIGVVSA--IPFFFGVASYCFEGVGMVLPLENSMRNK--HNFMPILV-CTVVIITSLYATFGICGYLAFGNDTDAVITLNFEGSGGLVTLVKVFLCLGLFFTYPVMLFPVFEVLQ-----------------------------------------PMVACGNKLENPQTTQKKGIVLRAGVVLLTAVIAAGVPDFGRFISFIGSTCCSLLAFILPAFFHLRLFSDEPSTCGNRLRQVFLCGMMLLGSVMLGAG 447          
The following BLAST results are available for this feature:
BLAST of NO17G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24318.12.700e-13661.49Amino acid transporter, transmembrane [Nannochloro... [more]
OSX79448.12.700e-3528.81hypothetical protein BU14_0076s0005 [Porphyra umbi... [more]
OSX79449.17.900e-3529.51hypothetical protein BU14_0076s0005 [Porphyra umbi... [more]
CEM39819.11.800e-3429.19unnamed protein product [Vitrella brassicaformis C... [more]
XP_020627998.11.800e-3127.27amino acid transporter ANTL1-like [Orbicella faveo... [more]
XP_009537183.15.900e-3028.51hypothetical protein PHYSODRAFT_352935 [Phytophtho... [more]
XP_015768245.12.900e-2926.52PREDICTED: proton-coupled amino acid transporter 1... [more]
XP_020899768.11.600e-2725.30amino acid transporter ANTL1-like isoform X1 [Exai... [more]
XP_005535906.12.100e-2729.21similar to amino acid transporter protein [Cyanidi... [more]
XP_002904113.11.400e-2627.01Amino Acid/Auxin Permease (AAAP) Family [Phytophth... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL157nonsL157Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR036ncniR036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR030ngnoR030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002907NSK002907Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01160.1NO17G01160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599979gene_7775Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100047g43gene6181Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01160.1NO17G01160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01160 ID=NO17G01160|Name=NO17G01160|organism=Nannochloropsis oceanica|type=gene|length=1790bp
CGACAGGAGTTATGGCTCACGACGACAGGGACAACTACAACGATGATAAT
GGGGACAATCAGCCTCTCCAAACACTCCCCACCGCATCAACAGCCTCGTC
GTCATCACCACCACCTTATCCCCACGACACGCAGCAGCGGCAGACCGCGG
CCAAGCACGCCATCAACGTGCTCAAGTCCTTCATTGGCTCCAACTTCCTG
TCCGTGCCCTTTGCTTTTGCCGCGGCCGGCTCGCTGCTAGGCCCACTGGC
TGTCGCCTTAATTGCCAGCGTCAGTGGCCTTGGGTGTCTCCTTCTCGTTC
AAATCCGCATAGACCTGCAACAACGGCTGCAGCACCAACAACAGCACCGG
CCGGCGGTCGAGACGTACGCGCAGGTGGCTGGAGCGCTATTGGGGAGACC
CGGCTACTACCTCGTCGAGGTGTTTTTGATATTAACCCAGGTGGGGTACT
GCATTGGCTATGTCATTTATATGAGCACGGCCATTCATCAATTCGCAGGA
GAGTCTTTATCCCTAGTTTATATTTTCTTCGGCCTGGTCACTCTTCCACT
GATCTGCTTGTGCCTTATTCCAGATTTAAAGCATTTTTTGCCGTTCGCTT
TCTTGAGTAATGTGGCGTTGCTGGTGGGTTTTCTCGCTGTACTTATCGCG
AGCGTGTCCCGGGCGCGGGATCAGGGGATATTTTACGTTACTTGGGGTGT
GGTGGATGCACGTAAGCTACCGTTGGCATTTGGAAATATTGTGGCGTCAT
TTGAGGGGATTGGGACGATTTTGAGCGTGGAGGGGAGTATGGCCCGTGAT
CAAGTGAGGGGATATTACCCTCTGTTGTTGAAACAAACCCTGCTGCTTGT
AACAATTTTGTTTTCTGCTTTTGGGATAGTGGGCTTCGGGGCGTTTGGAA
AAGAATTGTGCAGTGTGGTTCTGACAAATTTGCCCATGGGGGTATGTGCG
GACGTGGCGCGGGTCGCTCTGATCGTAGGATTGTTTTGTACGTgtaagtg
atggtggttgtgtgggcttgtgtgctcggggacggtgagaggggcggaga
ggacgtgagcggaagagatgggcaacaaagaataggcatgacctcaccgc
ccaccctcatccctcactcttctccctgcaccttattctctacactcctg
gatagATGGCTTTCAAATGTATCCGGTATATCAAATGATCGACTTGCGGC
TGCTTGGAGAAGATGTAGACACCTCATCGCCCTATTTTTTCCCAGGAGGT
TCGTCCCTCCTAGCTCATGACGGATATGGTGCCTTGCACTTCTCACCATC
ACTTGCTGATGCTGCTCCTGCAGCTGCTGTTGGCACCGCCCTCGGACGAA
GAAATATAAGAGCTGCGACCTACTTAGGGGTGCGTGTGGGCGTAGTGCTT
TTTACGTCCATAGTTGCTTACCTTCTGCCTGAATTTGAGCTGCTGGTGGC
ATTAGTGGGATCCATAGGCGGGGGCATGCTTGCATTTATAATGCCGGGAA
TTTTGGGGTGGGCCATGTATAAGGAGACGGCCACGAGGAAAGAGAAGGGG
AGGTATGGCTGTCTGATTGCGTTTGGGGTTGTTGGGGGGGTAATTGGAGC
GGGCCACGCGCTGCATGACTTGATTTATGGGCAATCGCAGTGCTAGACTA
TCTATGAAACAATGGACTGTCTTATTAGTAAGCATGTGTTTTAAAAGAGG
CATGTCATAAAGAAATGCGTGTGTGCACTCAGCAAATAAAGTACACTGGG
AAGGAACACCTCTTTTTATGAGCGTCCATACCATTTTAAC
back to top

protein sequence of NO17G01160.1

>NO17G01160.1-protein ID=NO17G01160.1-protein|Name=NO17G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MAHDDRDNYNDDNGDNQPLQTLPTASTASSSSPPPYPHDTQQRQTAAKHA
INVLKSFIGSNFLSVPFAFAAAGSLLGPLAVALIASVSGLGCLLLVQIRI
DLQQRLQHQQQHRPAVETYAQVAGALLGRPGYYLVEVFLILTQVGYCIGY
VIYMSTAIHQFAGESLSLVYIFFGLVTLPLICLCLIPDLKHFLPFAFLSN
VALLVGFLAVLIASVSRARDQGIFYVTWGVVDARKLPLAFGNIVASFEGI
GTILSVEGSMARDQVRGYYPLLLKQTLLLVTILFSAFGIVGFGAFGKELC
SVVLTNLPMGVCADVARVALIVGLFCTYGFQMYPVYQMIDLRLLGEDVDT
SSPYFFPGGSSLLAHDGYGALHFSPSLADAAPAAAVGTALGRRNIRAATY
LGVRVGVVLFTSIVAYLLPEFELLVALVGSIGGGMLAFIMPGILGWAMYK
ETATRKEKGRYGCLIAFGVVGGVIGAGHALHDLIYGQSQC*
back to top
Synonyms
Publications