NO17G01040, NO17G01040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01040 vs. NCBI_GenBank
Match: EWM21129.1 (tryptophanyl-trna cytoplasmic [Nannochloropsis gaditana]) HSP 1 Score: 731.5 bits (1887), Expect = 1.700e-207 Identity = 386/487 (79.26%), Postives = 404/487 (82.96%), Query Frame = 0 Query: 1 MATPSELRTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVE------EAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLEV 482 MA+PSELRTPQAVTSALIVKGALANVLGFPIG TTIGTHYSEGHRVRLTVQIG+APDPTE QFI+VAETIN +LAANQPVHV KL R +A+ +YK AMYNRHAVPES+TELTIAYIE +AFSCT EAVVASTG+VG+ITINKTKFRSAKKELE+QYTV AV XXXXXXXX QVVTPWEVEGDQEIDYD+LIKSFGSMRITE +VSRIERLT KCHRFLRRGLFFSHRDLTQLLD+YEKGTKFYLYTGRGPSSESLHLGHLIPFHFTR+LQ AFDVPLVIQLTDDEKFQFKQGL LEECHRLAYENAKD+IACGF+VKKTFIFSDLDYI HLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSF SSFPV L G DM CLIPCAIDQDAYFRMTRDVAPRLG KKPSLIHSKFFPGLEV Sbjct: 1 MASPSELRTPQAVTSALIVKGALANVLGFPIGGTTIGTHYSEGHRVRLTVQIGQAPDPTETQFIQVAETINTILAANQPVHVFKLARHRAQTSYKNAMYNRHAVPESITELTIAYIEKIAFSCTAEAVVASTGMVGAITINKTKFRSAKKELEIQYTVSTPSESGPAVLAVAKEDDETLPSSEAISLLNSDTVRQASGGKGNEKGGNXXXXXXXXGEGGQVVTPWEVEGDQEIDYDKLIKSFGSMRITESLVSRIERLTNRKCHRFLRRGLFFSHRDLTQLLDLYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRYLQEAFDVPLVIQLTDDEKFQFKQGLALEECHRLAYENAKDVIACGFDVKKTFIFSDLDYIQHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFPSSFPVPL---------KGCLDMPCLIPCAIDQDAYFRMTRDVAPRLGCKKPSLIHSKFFPGLEV 478
BLAST of NO17G01040 vs. NCBI_GenBank
Match: CBN78295.1 (Tryptophan--tRNA ligase [Ectocarpus siliculosus]) HSP 1 Score: 526.2 bits (1354), Expect = 1.100e-145 Identity = 272/481 (56.55%), Postives = 325/481 (67.57%), Query Frame = 0 Query: 1 MATPSELRTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAV-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 MAT + RTP T+ IVKGAL V+GFPIG +TIG+ SEG++ R+TV+ GKA PT AQ KV + +N +A +Q L +PR AE TY AMY+ P V EL++ YIEGL + STG VG +++ K KFR K+ELEV + VE + Q VTPWEVE D E+DY++L+KSFGS ITED+V+R+ER+TG K HRFLRRGLFFSHRDLTQ+LD+YE G KF+LYTGRGPSS++LHLGHL+PFHFT++LQ AF VPLV+QLTDDEKF FK L LEECHRLA+ENAKDIIACGF+ + TFIFSDLDYI H+YP VLKIQKLVT+NQ RGIFGFTES + G AFPAVQAAPSF SSFP+ L GG D CLIPCAIDQDAYFRMTRDVAPR+ +KP+LIHS+FFPGL+ Sbjct: 1 MATTVDPRTPTMTTALEIVKGALCAVIGFPIGKSTIGSRISEGNKARITVKTGKAEAPTAAQMQKVVDVVNEAIAKDQACFRLTMPRKDAESTYGSAMYDVVEPPAQVEELSLLYIEGLVLHSQLHPCLPSTGPVGKVSVTKQKFRVNKQELEVMFDVEPSTDTPTDDTATPPQCVPPSAETVVLLNASEARVSADDGVEGGVEESGKAAAEGGQKVTPWEVEADGEVDYEKLVKSFGSSLITEDIVARVERVTGRKAHRFLRRGLFFSHRDLTQILDLYEAGKKFFLYTGRGPSSDALHLGHLVPFHFTKYLQEAFKVPLVVQLTDDEKFLFKPELKLEECHRLAFENAKDIIACGFDPESTFIFSDLDYIQHMYPVVLKIQKLVTYNQVRGIFGFTESHNIGCQAFPAVQAAPSFSSSFPIPL---------GGTPDRPCLIPCAIDQDAYFRMTRDVAPRMKLRKPALIHSRFFPGLQ 472
BLAST of NO17G01040 vs. NCBI_GenBank
Match: CEM21761.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 438.7 bits (1127), Expect = 2.300e-119 Identity = 264/494 (53.44%), Postives = 316/494 (63.97%), Query Frame = 0 Query: 8 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGK-APDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQY----------------TVEEAV--KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQE--IDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 R P T+ IVKGAL L P +T + +G +R + +G +P E ++ E +N +AAN P+ V + R AE TY +AMY+ VP+SVTEL + +IE + V STG G I I K K S K LEV + EEA+ XXXXXXXXXXXXXXXXXX Q VTPWEVE D+E IDYD+LI FG +ITED +SRIERLT + HRFLRRGLFFSHRDL LL+ YE+G FYLYTGRGPSSE+LHLGHL+PF FT+WLQ AF+VPLVIQLTDDEKF FK+ LT+EEC RLAYENAKDI+A GF+ KTFIFSDLDYI +YP VL+IQK VT+NQ+RGIFGFTESD+ GK AFPAVQAAP+F + FP + G ++D+ CLIP AIDQD YFRMTRDVAPRLG+ KP+LIHS+F P L+ Sbjct: 7 RHPLLDTALHIVKGALVVALRIPTARSTKSVDFKKGLPLRGAITVGPVTSEPNEEDKRRIQELVNDKVAANVPIRVFAVARQLAETTYGEAMYDDFGVPKSVTELRLVFIEKWNINANIFPVAQSTGACGRIDITKWKHNSNKNSLEVSFDLTPTEAYTDEQNVPLATEEALANDQVPAREMVLPPADVAGTHGTDEATETNGNPXXXXXXXXXXXXXXXXXXGGQRVTPWEVEADEETGIDYDKLIIQFGCSKITEDHISRIERLTKQRAHRFLRRGLFFSHRDLDMLLNAYEQGEPFYLYTGRGPSSEALHLGHLVPFWFTKWLQDAFNVPLVIQLTDDEKFLFKENLTVEECKRLAYENAKDILAIGFDKDKTFIFSDLDYIQTMYPLVLQIQKKVTYNQSRGIFGFTESDNIGKSAFPAVQAAPAFPACFPAMF---------GNRKDIMCLIPQAIDQDPYFRMTRDVAPRLGFNKPALIHSRFVPALQ 491
BLAST of NO17G01040 vs. NCBI_GenBank
Match: XP_002783213.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EER15009.1 IFP53, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 438.0 bits (1125), Expect = 3.900e-119 Identity = 240/486 (49.38%), Postives = 298/486 (61.32%), Query Frame = 0 Query: 5 SELRTPQAVTSALIVKGALANVLGFPIGSTT--IGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLK-LPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVE------EAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 S R+P + ++KGA+ VL P G TT + H G +LT+ K +PTE Q +A + + N P V +PR AE Y MY+ VPESV EL + Y+E +C ++ STGL+G + + K+ + K LE+ +T+E E + Q VTPWEVEG D+ IDYD+LI+ FG I + ++ R+E+LTG K HRFLRRGLFFSHRDL LLD YE+G FYLYTGRGPSSESLHLGHL+PF FT+WLQ FDVPLVIQLTDDEKF FK L+LEE HRLAYENAKDIIACGF++ KTFIFSDLDY+G +YP V KIQKLVT+NQARG FGFT SDS GK +F A+QA+PSF ++FP + G ++D+ CLIP AIDQD YFR+TRDVAPR+G KP+LIHSKFFP L+ Sbjct: 2 SVTRSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHLGGG---KLTLNSIK-EEPTEEQKELIATNVYNKVEENAPFKVFTGVPRDLAERKYFDTMYDSFKVPESVKELRLVYLEQWNLNCNVHPIIKSTGLLGEVNLTHWKYSAKKATLEISFTLEPSCDVFEMAEEDGNVEDLPSLDIAVPYVPDGTITYHFKGVIVVTLAEQLDQNRVLGVSNCQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQASPSFSTTFPSIF---------GDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQ 474
BLAST of NO17G01040 vs. NCBI_GenBank
Match: XP_002766059.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EEQ98776.1 IFP53, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 437.6 bits (1124), Expect = 5.100e-119 Identity = 240/479 (50.10%), Postives = 296/479 (61.80%), Query Frame = 0 Query: 5 SELRTPQAVTSALIVKGALANVLGFPIGSTT--IGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLK-LPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGL 480 S R+P + ++KGA+ VL P G TT + H G +LT+ K +PTE Q +A + + N P V +PR AE Y MY+ VPESV EL + Y+E +C ++ STGL+G + + K+ + K LE+ +TVE + Q VTPWEVEG D+ IDYD+LI+ FG I + ++ R+E+LTG K HRFLRRGLFFSHRDL LLD YE+G FYLYTGRGPSSESLHLGHL+PF FT+WLQ FDVPLVIQLTDDEKF FK L+LEE HRLAYENAKDIIACGF++ KTFIFSDLDY+G +YP V KIQKLVT+NQARG FGFT SDS GK +F A+QA+PSF ++FP + G ++D+ CLIP AIDQD YFR+TRDVAPR+G KP+LIHSKFFP L Sbjct: 2 SVTRSPAFDAALHVIKGAVCTVLRIPTGRTTERVSPHLGGG---KLTLNSIK-EEPTEEQKELIATNVYNKVEENAPFKVFTGVPRDLAERKYFDTMYDSFKVPESVKELRLVYLEQWNLNCNVHPIIKSTGLLGEVNLTHWKYSAKKATLEISFTVEPS----------CDVFEMAEEDGNVEDLPSLDIAVPYVPDEQLDQNRVLGVSNCQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVGKSSFCAIQASPSFSTTFPSIF---------GDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPAL 457
BLAST of NO17G01040 vs. NCBI_GenBank
Match: XP_002787529.1 (IFP53, putative [Perkinsus marinus ATCC 50983] >EER19325.1 IFP53, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 436.4 bits (1121), Expect = 1.100e-118 Identity = 238/475 (50.11%), Postives = 295/475 (62.11%), Query Frame = 0 Query: 8 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLK-LPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEKGTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 R+P + ++KGA+ VL P G TT EG +LT+ K +PTE Q + ++ + N P V +PR AE+ Y MY+ VP+SV EL + Y+E +C +V STGL+G I + K K+ + K LE+ +TV+ Q VTPWEVEG D+ IDYD+LI+ FG I + ++ R+E+LTG K HRFLRRGLFFSHRDL LLD YE+G FYLYTGRGPSSESLHLGHL+PF FT+WLQ FDVPLVIQLTDDEKF FK L+LEE HRLAYENAKDIIACGF++ KTFIFSDLDY+G +YP V KIQKLVT+NQARG FGFT SDS K +F A+QA+PSF ++FP + G ++D+ CLIP AIDQD YFR+TRDVAPR+G KP+LIHSKFFP L+ Sbjct: 7 RSPAFDAALHVIKGAVCTVLRIPTGRTTDRVSPHEGGG-KLTLNAIK-DEPTEEQKELIVTNVHNKVEENAPFKVFTGVPRDLAEKKYFDTMYDSFKVPDSVKELRLVYLEQWNLNCNVHPIVKSTGLLGDINLTKWKYSAKKSTLEISFTVD----------PPCDVFEMAEEDSNVEDLPPLDIAVPYVPDEQLSQDGVLGVSEGQKVTPWEVEGSDEGIDYDKLIRDFGCSPIDQKLIDRMEKLTGKKAHRFLRRGLFFSHRDLGILLDKYERGIPFYLYTGRGPSSESLHLGHLVPFQFTKWLQDTFDVPLVIQLTDDEKFFFKDYLSLEEAHRLAYENAKDIIACGFDMDKTFIFSDLDYMGTMYPNVCKIQKLVTYNQARGAFGFTGSDSVAKSSFCAIQASPSFSTTFPSIF---------GDRKDIMCLIPQAIDQDPYFRVTRDVAPRMGMLKPALIHSKFFPALQ 460
BLAST of NO17G01040 vs. NCBI_GenBank
Match: PFH32209.1 (tryptophanyl-tRNA synthetase (TrpRS2) [Besnoitia besnoiti]) HSP 1 Score: 405.2 bits (1040), Expect = 2.800e-109 Identity = 228/506 (45.06%), Postives = 289/506 (57.11%), Query Frame = 0 Query: 5 SELRTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTV-QIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEG-DQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK----------------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 S RTP + IVKGA LG G TT +S+ ++ LT+ I +P TE + ++ + + N P VL +PR A+ YK++ + +P SV + + ++ + + STGL+ I + F KK+L + V AV Q VTPWEV+G D+ IDY++L+K FG IT ++V+RIE+LTG + H LRRG+FFSHRDL LLD EK G FYLYTGRGPSSE+LH+GHLIPF FT++LQ FDVPLVIQLTDDEKF FK+ LTLEE HRLA+ENAKDIIACGF+ KTFIFSDL YI HLYP +L+IQK VT+NQ RG+FGF ESD+ GK AFPAVQAAPSF ++FP++ GGK+++ CLIP AIDQD YFRMTRDVAPRLG KP+LIHS+F P L+ Sbjct: 2 SSSRTPFQDAALAIVKGAACVALGLKTGRTTQNVKFSKDYKAVLTLGPIEASPSATEVELLQT--LTSQKIEENAPFRVLTVPRDVADRLYKESYLDEFGIPASVKSVRLVILDEWNINANIHPTLKSTGLISDIKFERFMFIEEKKQLSISIQVVPAV--------AADAADLCAEEQNVNGEELPSLSQVLPPSGVEDEEAGSSEGSDQTVTPWEVQGSDEGIDYNKLLKKFGCSAITPELVARIEKLTGKRAHHLLRRGIFFSHRDLNLLLDALEKRQNAEKLQASKREDGSAGEAAKGDKESEGPAFYLYTGRGPSSEALHIGHLIPFMFTKYLQDTFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPIILEIQKKVTYNQVRGLFGFCESDNVGKSAFPAVQAAPSFPTAFPMIF---------GGKKNVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQ 488
BLAST of NO17G01040 vs. NCBI_GenBank
Match: XP_003881044.1 (tryptophanyl-tRNAsynthetase,related [Neospora caninum Liverpool] >CBZ51011.1 tryptophanyl-tRNAsynthetase,related [Neospora caninum Liverpool] >CEL68316.1 TPA: Tryptophanyl-tRNA synthetase, related [Neospora caninum Liverpool]) HSP 1 Score: 389.8 bits (1000), Expect = 1.200e-104 Identity = 218/495 (44.04%), Postives = 279/495 (56.36%), Query Frame = 0 Query: 8 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTV-QIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVEGDQ-EIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK--------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 RTP + IVKGA L G TT +S+ ++ +T+ + P +E + +K + N P V +PR A Y+++ + +P +V E+ + + + + STG + I KF + K++L + V A Q VTPW+V+ ++ IDYD+L+K FG IT ++SRIE LTG + H LRRG+FFSHRDL LLD EK G FYLYTGRGPSSE+LH+GHL+PF FT++LQ FDVPLVIQLTDDEKF FK+ LTLEE HRLA+ENAKDIIACGF+ KTFIFSDL YI HLYP +L+IQK VT+NQ RG+FGF ESD+ GK AFPAVQAAPSF ++FP++ GGK+D+ CLIP AIDQD YFRMTRDVAPRLG KP+LIHS+F P L+ Sbjct: 4 RTPYQDAALAIVKGAACIALSLKTGRTTRNVKFSKDNKCSITLGPVDNQPTASEEELLKT--LTQQKIEENCPFRVFTIPREVATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANIYPTLKSTGQIAEIRFETVKFVAEKRQLCLTLQVVPA---------DNGDAPAVAVEEKVAPEDLPTLSQVLPPSGVEGDDLGNDGQDDQTVTPWDVQANEGGIDYDKLLKKFGCSAITPQLISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDAIEKRQANLASEKREDGAGADAFSGPAFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVIQLTDDEKFLFKENLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNIGKSAFPAVQAAPSFPTAFPMIF---------GGKKDVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQ 478
BLAST of NO17G01040 vs. NCBI_GenBank
Match: KFH12174.1 (tryptophanyl-tRNA synthetase [Toxoplasma gondii MAS] >PUA90027.1 tryptophanyl-tRNA synthetase (TrpRS2) [Toxoplasma gondii TgCATBr9]) HSP 1 Score: 387.1 bits (993), Expect = 7.900e-104 Identity = 218/494 (44.13%), Postives = 276/494 (55.87%), Query Frame = 0 Query: 8 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVE-GDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK--------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 RTP + IVKGA L TT +S+ +R +T+ + +PT A+ + + N P V +PR A Y+++ + +P +V E+ + + + V+ STG + I KF KK+L + V Q +TPW+V+ + IDY++L+K FG IT D++SRIE LTG + H LRRG+FFSHRDL LLD EK G FYLYTGRGPSSE+LH+GHL+PF FT++LQ FDVPLVIQLTDDEKF FK LTLEE HRLA+ENAKDIIACGF+ KTFIFSDL YI HLYP +L+IQK VT+NQ RG+FGF ESD+ GK AFPAVQAAPSF ++FP++ GGK+D+ CLIP AIDQD YFRMTRDVAPRLG KP+LIHS+F P L+ Sbjct: 87 RTPFQDAALSIVKGAACIALSLKTARTTQNVKFSKDNRCSITLGPIEV-EPTAAEEALLKTLTKQKIEENCPFRVFTIPRDLATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANMYPVLKSTGQIADIQFESVKFNEEKKQLCLSLHV----------VPGPDEQSPALAEEEKLGPEEIPSRAQVLPPSGVEGDDFGEGDDDQTITPWDVQAAEGGIDYNKLLKKFGCSSITPDLISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDSLEKRQARLASGKREDGPGSEGLSGPGFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVIQLTDDEKFLFKDSLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNVGKSAFPAVQAAPSFPTAFPMIF---------GGKKDVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQ 560
BLAST of NO17G01040 vs. NCBI_GenBank
Match: EPR59882.1 (tryptophanyl-tRNA synthetase (TrpRS2) [Toxoplasma gondii GT1] >ESS33818.1 tryptophanyl-tRNA synthetase (TrpRS2) [Toxoplasma gondii VEG] >KFG28938.1 tryptophanyl-tRNA synthetase (TrpRS2) [Toxoplasma gondii p89] >KFG62553.1 tryptophanyl-tRNA synthetase (TrpRS2) [Toxoplasma gondii RUB]) HSP 1 Score: 385.6 bits (989), Expect = 2.300e-103 Identity = 217/494 (43.93%), Postives = 276/494 (55.87%), Query Frame = 0 Query: 8 RTPQAVTSALIVKGALANVLGFPIGSTTIGTHYSEGHRVRLTVQIGKAPDPTEAQFIKVAETINALLAANQPVHVLKLPRSQAEETYKKAMYNRHAVPESVTELTIAYIEGLAFSCTGEAVVASTGLVGSITINKTKFRSAKKELEVQYTVEEAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVTPWEVE-GDQEIDYDRLIKSFGSMRITEDVVSRIERLTGVKCHRFLRRGLFFSHRDLTQLLDMYEK--------------------GTKFYLYTGRGPSSESLHLGHLIPFHFTRWLQAAFDVPLVIQLTDDEKFQFKQGLTLEECHRLAYENAKDIIACGFNVKKTFIFSDLDYIGHLYPTVLKIQKLVTFNQARGIFGFTESDSCGKIAFPAVQAAPSFVSSFPVVLGRGRKGGKGGGKEDMACLIPCAIDQDAYFRMTRDVAPRLGYKKPSLIHSKFFPGLE 481 RTP + IVKGA L TT +S+ +R +T+ + +PT A+ + + N P V +PR A Y+++ + +P +V E+ + + + V+ STG + I KF KK+L + V Q +TPW+V+ + IDY++L+K FG IT +++SRIE LTG + H LRRG+FFSHRDL LLD EK G FYLYTGRGPSSE+LH+GHL+PF FT++LQ FDVPLVIQLTDDEKF FK LTLEE HRLA+ENAKDIIACGF+ KTFIFSDL YI HLYP +L+IQK VT+NQ RG+FGF ESD+ GK AFPAVQAAPSF ++FP++ GGK+D+ CLIP AIDQD YFRMTRDVAPRLG KP+LIHS+F P L+ Sbjct: 87 RTPFQDAALSIVKGAACIALSLKTARTTQNVKFSKDNRCSITLGPIEV-EPTAAEEALLKTLTKQKIEENCPFRVFTIPRDLATRMYQESYLDEFGIPANVKEVRLVVLPEWNINANMYPVLKSTGQIADIQFESVKFNEEKKQLCLSLHV----------VPGPDEQSPALAEEEKLGPEEIPSRAQVLPPSGVEGDDFGEGDDDQTITPWDVQAAEGGIDYNKLLKKFGCSSITPELISRIEALTGKRAHHLLRRGIFFSHRDLNLLLDSLEKRQARLASGKREDGPGSEGLSGPGFYLYTGRGPSSEALHIGHLVPFMFTKYLQDVFDVPLVIQLTDDEKFLFKDSLTLEETHRLAFENAKDIIACGFDPDKTFIFSDLSYIQHLYPVILEIQKKVTYNQVRGLFGFVESDNVGKSAFPAVQAAPSFPTAFPMIF---------GGKKDVRCLIPQAIDQDPYFRMTRDVAPRLGLLKPALIHSRFIPALQ 560 The following BLAST results are available for this feature:
BLAST of NO17G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01040 ID=NO17G01040|Name=NO17G01040|organism=Nannochloropsis oceanica|type=gene|length=4305bpback to top protein sequence of NO17G01040.1 >NO17G01040.1-protein ID=NO17G01040.1-protein|Name=NO17G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=482bpback to top protein sequence of NO17G01040.2 >NO17G01040.2-protein ID=NO17G01040.2-protein|Name=NO17G01040.2|organism=Nannochloropsis oceanica|type=polypeptide|length=604bpback to top Synonyms
Publications
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