NO17G00740, NO17G00740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00740 vs. NCBI_GenBank
Match: XP_005852679.1 (NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Nannochloropsis gaditana CCMP526] >EKU23157.1 NADH dehydrogenase (ubiquinone) Fe-S protein 8 [Nannochloropsis gaditana CCMP526] >EWM21160.1 nadh dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 289.3 bits (739), Expect = 1.100e-74 Identity = 187/222 (84.23%), Postives = 198/222 (89.19%), Query Frame = 0 Query: 22 MASQLLARALRRVAVTAXXXXXXSLLRPAVS----QATVSFSSGG-SNKPAPLEDPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 MASQLL R L+R + S +RPAV QA+++ SS S PAPL++PKTSFSEVLDRATNIFFLTEL+RGFWLSFEV+MKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEA+QRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR Sbjct: 1 MASQLLTRVLQRGLPPS--ASLRSSIRPAVQAPLVQASLALSSSNKSTPPAPLQEPKTSFSEVLDRATNIFFLTELMRGFWLSFEVSMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAEQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 220
BLAST of NO17G00740 vs. NCBI_GenBank
Match: CBN78476.1 (NUOI homolog, NADH dehydrogenase (ubiquinone) subunit [Ectocarpus siliculosus]) HSP 1 Score: 216.9 bits (551), Expect = 7.000e-53 Identity = 137/170 (80.59%), Postives = 150/170 (88.24%), Query Frame = 0 Query: 69 LEDPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 +E +T +DR +NI F+ E+ R WLS EV KPKVTINYPFEKG LSPRFRGEHALRRYP+GEERCI+CKLCEAICPAQAITIEA+QR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPN+EFATETHEELLYDKEKLLANGD+WEVAIA+NLAA+H YR Sbjct: 67 IEFKETGLLTTIDRLSNIMFMAEIFRALWLSAEVFFKPKVTINYPFEKGPLSPRFRGEHALRRYPSGEERCISCKLCEAICPAQAITIEAEQREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNYEFATETHEELLYDKEKLLANGDRWEVAIAQNLAADHPYR 236
BLAST of NO17G00740 vs. NCBI_GenBank
Match: OEU22320.1 (NADH-quinone oxidoreductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 213.8 bits (543), Expect = 5.900e-52 Identity = 134/165 (81.21%), Postives = 150/165 (90.91%), Query Frame = 0 Query: 74 TSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 T + + DRA+ IFFLTE+ RGF L+FEV++KPKVTINYPFE+G+LSPRFRGEHALRRYP G+ERCI+CKLCEAICPAQAITIEA+ R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPN+EFATETHEELLYDKEKLL+NGDKWE IA+NL +E LYR Sbjct: 53 TPWETIFDRASQIFFLTEIFRGFALAFEVSVKPKVTINYPFERGYLSPRFRGEHALRRYPTGDERCISCKLCEAICPAQAITIEAETREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNYEFATETHEELLYDKEKLLSNGDKWEKQIAKNLMSEFLYR 217
BLAST of NO17G00740 vs. NCBI_GenBank
Match: XP_002181917.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46457.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 212.6 bits (540), Expect = 1.300e-51 Identity = 133/163 (81.60%), Postives = 148/163 (90.80%), Query Frame = 0 Query: 76 FSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 +SE+LD ++ IFFLTE+ R +WL+ EV +KP+VTINYP+EKG+LSPRFRGEHALRRYP+GEERCIACKLCEA CPAQAITIE +R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLL+NGDKWE IA+NL EHLYR Sbjct: 1 WSEILDNSSRIFFLTEIARAWWLAGEVFLKPRVTINYPYEKGYLSPRFRGEHALRRYPSGEERCIACKLCEAACPAQAITIEVQEREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLSNGDKWERQIAKNLMHEHLYR 163
BLAST of NO17G00740 vs. NCBI_GenBank
Match: XP_002898515.1 (NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Phytophthora infestans T30-4] >EEY62992.1 NADH dehydrogenase iron-sulfur protein 8, mitochondrial precursor [Phytophthora infestans T30-4]) HSP 1 Score: 209.5 bits (532), Expect = 1.100e-50 Identity = 143/209 (68.42%), Postives = 166/209 (79.43%), Query Frame = 0 Query: 31 LRRVAVTAXXXXXXSLLRPAVSQATVSFSSGGSNKPAP-LEDPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 LRR A S PA A + G +N PAP +DPK ++ EV+++ ++ FFL+++ R WL++EV ++ KVTINYP+EKG LSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATE+HEELLYDK KLLANGDKWE IA+NL+ E LYR Sbjct: 6 LRRSAAAVAAKQSLSRTAPA---AVAGSTRGFANIPAPGKQDPKPTWGEVIEKMSDTFFLSDVFRATWLAWEVHVERKVTINYPYEKGMLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATESHEELLYDKAKLLANGDKWEFEIAKNLSVEQLYR 211
BLAST of NO17G00740 vs. NCBI_GenBank
Match: OWY96517.1 (NADH dehydrogenase [Phytophthora megakarya]) HSP 1 Score: 209.5 bits (532), Expect = 1.100e-50 Identity = 140/192 (72.92%), Postives = 164/192 (85.42%), Query Frame = 0 Query: 48 RPAVSQATVSFSSGGSNKPAPLE-DPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 + +VS+AT + G +N PAP + DPK ++ EV+++ ++ FFL+++ R WLS+EV ++ KVTINYP+EKG LSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATE+HEELLYDK KLLANGDKWE IA+NL+ E LYR Sbjct: 16 KQSVSRATA--ARGFANVPAPGQLDPKPTWGEVIEKMSDTFFLSDVFRATWLSWEVHVERKVTINYPYEKGMLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATESHEELLYDKAKLLANGDKWEFEIAKNLSVEQLYR 205
BLAST of NO17G00740 vs. NCBI_GenBank
Match: XP_008908626.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica INRA-310] >ETI42576.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica P1569] >ETK82594.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica] >ETL35983.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica] >ETL89202.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica] >ETM42461.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica] >ETN06124.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica INRA-310] >ETO71245.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica P1976] >ETP12292.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica CJ01A1] >KUF84859.1 NADH dehydrogenase [Phytophthora nicotianae] >KUF85741.1 hypothetical protein AM588_10000998 [Phytophthora nicotianae]) HSP 1 Score: 208.8 bits (530), Expect = 1.900e-50 Identity = 144/209 (68.90%), Postives = 165/209 (78.95%), Query Frame = 0 Query: 31 LRRVAVTAXXXXXXSLLRPAVSQATVSFSSGGSNKPAPLE-DPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 LRR A S PA A + G +N PAP + DPK ++ EV+++ ++ FFL+++ R WL++EV ++ KVTINYP+EKG LSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDK KLLANGDKWE IA+NL+ E LYR Sbjct: 6 LRRSAAAVAAKQSLSRTAPA---AVAGSARGFANIPAPGKVDPKPTWGEVIEKMSDTFFLSDVFRATWLAWEVHVERKVTINYPYEKGMLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKAKLLANGDKWEFEIAKNLSVEQLYR 211
BLAST of NO17G00740 vs. NCBI_GenBank
Match: ETP40420.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [Phytophthora parasitica P10297]) HSP 1 Score: 208.8 bits (530), Expect = 1.900e-50 Identity = 144/209 (68.90%), Postives = 165/209 (78.95%), Query Frame = 0 Query: 31 LRRVAVTAXXXXXXSLLRPAVSQATVSFSSGGSNKPAPLE-DPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 LRR A S PA A + G +N PAP + DPK ++ EV+++ ++ FFL+++ R WL++EV ++ KVTINYP+EKG LSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDK KLLANGDKWE IA+NL+ E LYR Sbjct: 6 LRRSAAAVAAKQSLSRTAPA---AAAGSARGFANIPAPGKVDPKPTWGEVIEKMSDTFFLSDVFRATWLAWEVHVERKVTINYPYEKGMLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKAKLLANGDKWEFEIAKNLSVEQLYR 211
BLAST of NO17G00740 vs. NCBI_GenBank
Match: AAN31478.1 (NADH dehydrogenase [Phytophthora infestans]) HSP 1 Score: 208.4 bits (529), Expect = 2.500e-50 Identity = 143/209 (68.42%), Postives = 165/209 (78.95%), Query Frame = 0 Query: 31 LRRVAVTAXXXXXXSLLRPAVSQATVSFSSGGSNKPAP-LEDPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEADQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 LRR A S PA A + G +N PAP +DPK ++ EV+++ ++ FFL+++ R WL++EV ++ KVTINYP+EKG LSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATE+HEELLYDK KLLANGDKWE IA+NL+ E LYR Sbjct: 6 LRRSAAAVAAKQSLSRTAPA---AVAGSTRGFANIPAPGKQDPKPTWGEVIEKMSDTFFLSDVFRATWLAWEVHVERKVTINYPYEKGMLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATESHEELLYDKAKLLANGDKWEFEIAKNLSVEQLYR 211
BLAST of NO17G00740 vs. NCBI_GenBank
Match: GAX99170.1 (NADH dehydrogenase [Pythium insidiosum]) HSP 1 Score: 207.6 bits (527), Expect = 4.300e-50 Identity = 144/211 (68.25%), Postives = 165/211 (78.20%), Query Frame = 0 Query: 31 LRR--VAVTAXXXXXXSLLRPAVSQATVSFSSGGSNKPAPLEDPKTSFSEVLDRATNIFFLTELLRGFWLSFEVAMKPKVTINYPFEKGHLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAD-QRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFATETHEELLYDKEKLLANGDKWEVAIARNLAAEHLYR 239 LRR VA++ S+ PA + A FSS N + ED K +++E++D A N+FFL E+ R WL++E+ ++ K T+NYPFEKG LSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEF+TETHEELLYDK KLLANGDKWE IA NL+ E LYR Sbjct: 3 LRRSVVALSTAKQAKQSVRAPA-ALAAREFSSASPNSVSKYEDKKPTWTEIIDNAANLFFLGEIFRATWLAWEIHLERKATVNYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPNFEFSTETHEELLYDKAKLLANGDKWEFEIAHNLSVEQLYR 212 The following BLAST results are available for this feature:
BLAST of NO17G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00740 ID=NO17G00740|Name=NO17G00740|organism=Nannochloropsis oceanica|type=gene|length=924bpback to top protein sequence of NO17G00740.1 >NO17G00740.1-protein ID=NO17G00740.1-protein|Name=NO17G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=239bpback to top Synonyms
Publications
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