NO17G00640, NO17G00640 (gene) Nannochloropsis oceanica

Overview
NameNO17G00640
Unique NameNO17G00640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2249
Alignment locationchr17:226500..228748 +

Link to JBrowse

Properties
Property NameValue
DescriptionWd repeat-containing protein 27-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:226500..228748 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO17G00640 vs. NCBI_GenBank
Match: XP_022777610.1 (WD repeat-containing protein 27-like [Stylophora pistillata])

HSP 1 Score: 154.5 bits (389), Expect = 1.000e-33
Identity = 133/518 (25.68%), Postives = 213/518 (41.12%), Query Frame = 0
Query:   57 KFKLVDKPIVFHSRISSSGYGQQQKISHSKAKKYANMTAPPLPLILPRYPMEDEDGPPTVAYWSPR--ACDIPGPSSAAHVTA-----SPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            K ++ D+P+ FHS++ SSGY      S +++K ++  T+   P     +P++        +  S +    D   P+   H  +     +P+  + +S  G  +A    + +V +     S +    TVF+     V SVS SH    ++ SS D    L                           +SS H     +    N +    +S  T+ + V +  P    +T   F+Y+D+++LLAS N L ++ YHI    KD + R+ +                         + A Q+T  + +N   S ++L   S++S  + D      +R   DAH R +H++     S FV   S PP+  D+F +AA    + LWDLR     +  ++ H+NR + IGVA SPC RF+A GSED  AY+YD+R G    +                                                   T H +VVS VAF+P  P+LVT S DG +RF+
Sbjct:  484 KTEVFDQPLTFHSKVKSSGYSS----SAARSKMFSPSTSASKPKKASAFPLKKAASTSLCSGASLKEYPMDSEAPTDLQHKLSHTEKPAPINCIVFSDDGKHIACGLANKSVHMMRPPPSSKE---TVFTGHDGSVTSVSFSHDSRWLMTSSSDKTVKL---------------------------WSSAHSDPGMTFSSVNHNF---ASELTNSTNVKDNPPFSKEITQAKFYYIDKFVLLASGNGLHMYKYHIGTGQKDDVKRYQTNNKYKLVKIFQ-------------QERAQQITCFSAINGFHSYIVLCCGSNKSIQVFDMNAARTVRVVMDAHTRPVHTICQNEGSMFV---SHPPNAYDLFLTAAVTDGIKLWDLRTNRC-VRRYDGHVNRSQPIGVAISPCARFIATGSEDRSAYLYDIR-GNTFCHRL-------------------------------------------------TGHTDVVSEVAFHPAQPQLVTASLDGRLRFY 897          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: OQR82294.1 (hypothetical protein ACHHYP_16266 [Achlya hypogyna])

HSP 1 Score: 151.0 bits (380), Expect = 1.100e-32
Identity = 147/518 (28.38%), Postives = 212/518 (40.93%), Query Frame = 0
Query:   57 KFKLVDKPIVFHSRISSSGYGQQQKISHS-------KAKKYANMTAPPLPLILPRYPMEDEDGPPTVAYWSPRACDIPGPSSAAHVTASPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            K   +D+PI + S I SSGYG  +  S S       K KK   +   P P  L  YP++            P A     P    H      +D A    G  +A AA D   QVF L    R+    VF      VR+V  SHS +L+L SS D  A ++  G             V+ +V   PS                          T +  + +       VT+  F+++D+++ L   N L L    +        I+   +                        +    LT++A  N+ LS L++T  SD+S  ++DA  G  +R    AH R+ HS+ +P++S+FV   + PP+  D+  + A DSTV LWD+RA    I  F +H+NR   +G+AFSPC+R++A GSED VAY+YD+R GR                                           +  G          H +VV+ VAFNPL P+L T S DG VRF+
Sbjct:  441 KASKLDQPITYRSSIPSSGYGAAKPKSLSLKFKGLAKGKKSMAVPKEP-PRHLAEYPVDSA---------MPTAHLSTVPHRKVHEMGINQIDFAPD--GQSVATAANDKLAQVFSL----RKPGSHVFVGHDKAVRTVQWSHSNKLLLTSSADTTARVWVAG-----------NDVASLVLPPPS--------------------------TKVHKIDD-------VTSARFYFMDKFVALTVGNALKLILIDVDFAHALGCIKQAKKTSDLARLENHSKAKVVASYR---FEAVQSLTSLASPNAFLSHLLVTTGSDKSVRIVDAAVGKTVRVMHGAHTRAAHSVVLPHASRFV---NHPPNFYDLMLTGACDSTVHLWDIRADNC-IMRFAEHLNRVHPVGLAFSPCMRYVATGSEDKVAYLYDVRMGRSVA----------------------------------------KLHG----------HTDVVAAVAFNPLVPQLATASLDGTVRFY 841          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: OQR82105.1 (hypothetical protein THRCLA_11123 [Thraustotheca clavata])

HSP 1 Score: 147.5 bits (371), Expect = 1.300e-31
Identity = 94/292 (32.19%), Postives = 139/292 (47.60%), Query Frame = 0
Query:  277 VTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFHD 569
            +T  +FFY+D++I LA  N L L  Y I +      I   ++                        ++   LT +AC N+ LS LI+  CSDRS  ++D      +RT  ++H+R  HS+ +P +S +V   S PP++ D+  + A DSTV LWD+RA    +  F +H NR   IG+AFSPC+R++  GSED VAY+YD+R GR  V                                        +  G          H +VVS +AFNPL  +LVT ++DG +RF++
Sbjct:  612 ITDANFFYMDKFIALAVGNALKLIQYDIDMAYAQGCI--SAKKTKKKAIEALENHSSAKTMASFRFENVQTLTGIACANAFLSHLIVATCSDRSIRIIDVAQSKTVRTIENSHSRPAHSIVLPRASSYV---SHPPNYYDLMLTGACDSTVHLWDIRADNC-VMRFAEHANRVHIIGLAFSPCMRYVVSGSEDKVAYMYDIRMGRSIV----------------------------------------KLHG----------HTDVVSSIAFNPLKTQLVTAAFDGSIRFYN 847          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: KOO33486.1 (wd repeat-containing protein 27-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 145.6 bits (366), Expect = 4.800e-31
Identity = 154/551 (27.95%), Postives = 216/551 (39.20%), Query Frame = 0
Query:   36 LSAATAYDSFYGSNLTQKLRDKFKLVDKPIVFHSRISSSGYGQQQKISHSKAKKYANMTAPPLPLILPRYPMEDEDGPPTVAYWSPRACDIPGP--------SSAAHVTASPLLDMAYSYKGDLLALAAMDGTV--QVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAV---SFFYLDRYILLASQNKLSLHTYHIA--IPAKDAL----IRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            +SA +      G+ +  KL    KL   P  FH +I+SSGYG+   +     K +A   +                        + R     GP        SSA     S  + +A+S     +A+AA DGTV  Q  P  +     PPT+     A + SV  SHS  L L++S DG A L+ +               +P++R D      H++     G              ++ T +    +PP  T V    FFYLD ++LLA+ + L L++Y +    P  DA     +RH  R                          AH +T  A  NS LSPL L A SDRS  ++D   G  +    DAH R +  L +   S   A+   P +  D+F SAA D  V LWDLR+ A+ +     H+NR   IG A SPC+R++A GSED  AY+YD                                                    R GG      H   V  VAF+PL+P+L   + DG VRF+
Sbjct:    1 MSAPSELGKVAGAVVGAKLAATGKLAATPATFHRKIASSGYGKPPVM-----KLHAGGPSXXXXXXXXXXXXXXXXXXXXXXVLARRYSPAEGPMCHLQVENSSAPRPLDSAAIRLAFSPDATRIAIAAADGTVAIQRLPARRHSHVAPPTLL-GHRAAISSVHWSHSGRLFLSASADGSACLWDVA-------PDTKPPAAPLLRFD------HLTHPPRPG--------------AVPTTAEALANPPLSTEVRGARFFYLDTFVLLAAGSGLHLYSYALGPRAPTHDATRAAELRHSYRLQTRWPL-----------------SRAHHITCFAAANSFLSPLALIAGSDRSIEVVDLGTGQRVLELEDAHERPVQLLRLHEGS---AAGDTPTAGHDLFLSAALDGAVKLWDLRS-ASCVRRLGAHVNRVHPIGAALSPCLRYVATGSEDRSAYLYD---------------------------------------------------ARSGGLIERLRHSESVVDVAFSPLYPQLAMCALDGSVRFY 446          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: PFX32770.1 (WD repeat-containing protein 27 [Stylophora pistillata])

HSP 1 Score: 144.8 bits (364), Expect = 8.100e-31
Identity = 114/429 (26.57%), Postives = 188/429 (43.82%), Query Frame = 0
Query:   57 KFKLVDKPIVFHSRISSSGYGQQQKISHSKAKKYANMTAPPLPLILPRYPMEDEDGPPTVAYWSPR--ACDIPGPSSAAHVTA-----SPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLR 479
            K ++ D+P+ FHS++ SSGY      S +++K ++  T+   P     +P++        +  S +    D   P+   H  +     +P+  + +S  G  +A    + +V +     S +    TVF+     V SVS SH    ++ SS D    L                           +SS H     +    N +    +S  T+ + V +  P    +T   F+Y+D+++LLAS N L ++ YHI    KD + R+ +                         + A Q+T  + +N   S ++L   S++S  + D      +R   DAH R +H++     S FV   S PP+  D+F +AA    + LWDLR     +  ++ H+NR + IGVA SPC RF+A GSED  AY+YD+R
Sbjct:  453 KTEVFDQPLTFHSKVKSSGYSS----SAARSKMFSPSTSASKPKKASAFPLKKAASTSLCSGASLKEYPMDSEAPTDLQHKLSHTEKPAPINCIVFSDDGKHIACGLANKSVHMMRPPPSSKE---TVFTGHDGSVTSVSFSHDSRWLMTSSSDKTVKL---------------------------WSSAHSDPGMTFSSVNHNF---ASELTNSTNVKDNPPFSKEITQAKFYYIDKFVLLASGNGLHMYKYHIGTGQKDDVKRYQTNNKYKLVKIFQ-------------QERAQQITCFSAINGFHSYIVLCCGSNKSIQVFDMNAARTVRVVMDAHTRPVHTICQNEGSMFV---SHPPNAYDLFLTAAVTDGIKLWDLRTNRC-VRRYDGHVNRSQPIGVAISPCARFIATGSEDRSAYLYDIR 827          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: XP_020605902.1 (WD repeat-containing protein 27-like [Orbicella faveolata] >XP_020605903.1 WD repeat-containing protein 27-like [Orbicella faveolata])

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-30
Identity = 133/520 (25.58%), Postives = 204/520 (39.23%), Query Frame = 0
Query:   62 DKPIVFHSRISSSGYGQ--------QQKISHSKAK------KYANMTAPPLPLILPRYPMEDEDGPPTVAYWSPRACDIPGPSSAAHVTASPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            D+P+ FHS++ SSGY              SHSK+K      K A  ++      L  YP+ D + P  + Y  P                +P+  + ++  G  +A A  + +  +     S +    TVF+     V SV+ SH    +L SS D    L+                        P+ S P M            +G S         V +  P    +    F+Y+D+++L+AS N L ++ YHI    KD + R+ +                         + A Q+T  + +N   S ++L   S++S  + D      +R   DAH+R  H++     S FV   S PP+  D+F +AA    + LWDLR     +  ++ H+NR + +GVA SPC RF+A GSED  AY+YD+R G    +                                                   T H +VVS VAF+P  P+LVT S DG +RF+
Sbjct:  293 DQPLTFHSKVKSSGYTAAAPRSKMFSPNTSHSKSKTTTVSLKRATFSSSSSGATLKEYPV-DSEAPTNLQYKIPLT-----------EKPTPINSVVFAGDGKHIACALANKSAHMLRPPPSTKE---TVFTGHDGSVTSVNFSHDSRWLLTSSCDRTVRLW-----------------------SPAHSDPLMVFSSVNHNFASELGSSDK-------VKDNPPFGKEIIQAKFYYVDKFVLVASGNGLHMYKYHIDAGQKDDVKRYQTNNKYKLVKIFH-------------QERAQQITCFSAINGFHSYIVLCCGSNKSIQVFDINAARTVRVVLDAHSRPAHTIQQNEGSMFV---SHPPNAYDLFLTAAVGDGIKLWDLRTNRC-VRRYDGHVNRSQPVGVAISPCARFIATGSEDRSAYLYDIR-GNTFCHRL-------------------------------------------------TGHTDVVSGVAFHPARPQLVTASLDGKLRFY 700          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: CCA15622.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 142.9 bits (359), Expect = 3.100e-30
Identity = 135/516 (26.16%), Postives = 214/516 (41.47%), Query Frame = 0
Query:   62 DKPIVFHSRISSSGYGQQQKISHSKAKK------YANMTAPPLPLILPRYPMEDEDGPPTVAYWSPRAC--DIPGPSSAAHVTASPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSR-XXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLN-STLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            +K I    RI SSGYG +     + AKK         ++   L ++   YP++ E     + ++  +    DI   + A H        M +S     LA    D   Q+  L  ++ +    VF      VR V  SH+ + +L +S+D  A L+ +    +  + + +    PV    PS                 +  G +    +     +       +TA  FFY+D+++L+A+ N + L+ Y +     D+   +  R                            H + A+AC+N S LS  I+ + SDRS  + D       R   DAH R IH+L++P++S + + PS   ++ D+  S++  ST+ LWDLR  A  +  FN H NR   +G+AFSPC+R++  GSED  A +YD+R GR   Y                                                   + H +VV+ VA+NPLHP+L T SYDG VRF+
Sbjct:  362 NKSISRSLRIRSSGYGAEMPFQLALAKKKKAQVRKKRVSTSQLEIMSKEYPVDCE----AIRHFQQKHALHDITLHNGAIHT-------MEFSSGAKYLATGGGDHVGQICKLPMNKYQGEGNVFLGHNDAVRLVRWSHNNKTLLTTSNDQSACLWAISS--DMPSLTWNSAFVPVESSGPS-----------------TTYGINRLQAASKLQKDRTKRRQDITAAQFFYMDKFVLIAAGNFIRLYQYTLDTRFADSKRENPRRKKNAPQAISEMKNRSRKRKVGNWQFPDFHNVKAIACVNGSLLSHSIVLSGSDRSIRVFDVATEQIARMILDAHERGIHTLALPHASCYTSHPS---NYYDLLLSSSFTSTIHLWDLRT-AYCVMQFNQHKNRIHSVGMAFSPCMRYMTTGSEDRKAVMYDVRTGRALHYL--------------------------------------------------SGHTDVVTSVAYNPLHPQLATASYDGTVRFY 793          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: CCA16317.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 142.9 bits (359), Expect = 3.100e-30
Identity = 135/516 (26.16%), Postives = 214/516 (41.47%), Query Frame = 0
Query:   62 DKPIVFHSRISSSGYGQQQKISHSKAKK------YANMTAPPLPLILPRYPMEDEDGPPTVAYWSPRAC--DIPGPSSAAHVTASPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSR-XXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLN-STLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            +K I    RI SSGYG +     + AKK         ++   L ++   YP++ E     + ++  +    DI   + A H        M +S     LA    D   Q+  L  ++ +    VF      VR V  SH+ + +L +S+D  A L+ +    +  + + +    PV    PS                 +  G +    +     +       +TA  FFY+D+++L+A+ N + L+ Y +     D+   +  R                            H + A+AC+N S LS  I+ + SDRS  + D       R   DAH R IH+L++P++S + + PS   ++ D+  S++  ST+ LWDLR  A  +  FN H NR   +G+AFSPC+R++  GSED  A +YD+R GR   Y                                                   + H +VV+ VA+NPLHP+L T SYDG VRF+
Sbjct:  302 NKSISRSLRIRSSGYGAEMPFQLALAKKKKAQVRKKRVSTSQLEIMSKEYPVDCE----AIRHFQQKHALHDITLHNGAIHT-------MEFSSGAKYLATGGGDHVGQICKLPMNKYQGEGNVFLGHNDAVRLVRWSHNNKTLLTTSNDQSACLWAISS--DMPSLTWNSAFVPVESSGPS-----------------TTYGINRLQAASKLQKDRTKRRQDITAAQFFYMDKFVLIAAGNFIRLYQYTLDTRFADSKRENPRRKKNAPQAISEMKNRSRKRKVGNWQFPDFHNVKAIACVNGSLLSHSIVLSGSDRSIRVFDVATEQIARMILDAHERGIHTLALPHASCYTSHPS---NYYDLLLSSSFTSTIHLWDLRT-AYCVMQFNQHKNRIHSVGMAFSPCMRYMTTGSEDRKAVMYDVRTGRALHYL--------------------------------------------------SGHTDVVTSVAYNPLHPQLATASYDGTVRFY 733          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: OWZ22628.1 (hypothetical protein PHMEG_0002640 [Phytophthora megakarya])

HSP 1 Score: 142.1 bits (357), Expect = 5.300e-30
Identity = 136/525 (25.90%), Postives = 207/525 (39.43%), Query Frame = 0
Query:   59 KLVDKPIVFHSRISSSGYGQQQKISHSK---------AKKYANMTAPPLPLILPRYPMEDEDGPPTVAYWSPRACDIPGPSSAAHVTASPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTYHIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVH---DHAHQLTAVACLNST-LSPLILTACSDRSFSLLDATHGS---FLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            K +DKP+ FH+RI SSGYG        +          K Y++     L      Y  E       + ++ P+      P    H  A  +L + YS     LA +  D   QV  L   R      VF      VR+V  S + ++++    D  + L+  G   +  ++   + V+P   +                 R +                        +    FFY+D+++L A  N + LH + +     +A  R  S                       V    D    +T++AC+N   LS + + A SDRS  +LD   G     +R   DAH+R  H++++P  + + + PS   +  D+  S+A DST  LWD+RA    +  F +H+NR   +GV FSPC+R++A GSED  AY+YD+R GR  V                                             KG       H +VV+ VAF+PLHP+L T S DG VRF+
Sbjct:  508 KNLDKPVTFHTRIKSSGYGSSAPFGSRRTPPKSRAISGKSYSSRAKSSLSTSTSAYLKEYPTNCGLLQHYQPKHA---LPPKTLHQGA--ILHIEYSSDAKWLATSGNDRVAQVCKLPFCRFGGEGNVFVGHDQAVRAVHWSQNDQMLVTVGSDKTSRLWLAG---SDTSSLTFQGVAPPSGVXXXXXXXXXXXXXXXATRQE------------------------IVEAQFFYMDKFLLSACGNVVRLHQFEL----DEAYARASSSKAKSKRRNDVEVLENQSRKKQVVQWSFDDMQSVTSLACVNGAFLSSVAVIAGSDRSLQVLDVGSGGGGRTVRVVSDAHSRPAHTVALPRPTCYASHPS---NFYDLLLSSAPDSTTHLWDIRADNC-VMRFCEHVNRVHTLGVTFSPCMRYVATGSEDRAAYIYDIRTGRRLVKL-------------------------------------------KG-------HSDVVTSVAFSPLHPQLATASCDGTVRFY 942          
BLAST of NO17G00640 vs. NCBI_GenBank
Match: POM78598.1 (G-protein beta WD-40 repeats containing protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 141.4 bits (355), Expect = 9.000e-30
Identity = 138/529 (26.09%), Postives = 216/529 (40.83%), Query Frame = 0
Query:   59 KLVDKPIVFHSRISSSGYGQQQKISHSKAKKYANMTAPPLPLILPR-----YPMEDEDGPPTVAYWS--PRACDIPGPSSAAH------VTASPLLDMAYSYKGDLLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLASSDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCRNDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLHTY---HIAIPAKDALIRHHSRXXXXXXXXXXXXXXXXXXXXXXVHDHAHQLTAVACLNST-LSPLILTACSDRSFSLLDATHGS---FLRTFFDAHARSIHSLSVPNSSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRREKIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYXXXXXXXXXXXXXXXXXXXXXXMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNPLHPELVTGSYDGGVRFH 568
            K +DKP+ FH+RI SSGYG       S +  +     PP    + R     +  ++     T AY    P +C +       H      +    +L + YS     +A +  D   QV  L  SR R    VF      VR+V  S + ++++    D  + L+                            S   S    G     S+  ++++  S+S+      +   +    FFY+D+++L A  N + LH +    +   A  +  +H  +                        D    +T++AC+N   LS + + A SDRS  +LD   G     +R   DAH R+  ++++P  + + + PS   +  D+  S+A DST+ LWD+RA    +  F +H+NR   +GVAFSPC+R++A GSED  AY+YD+R G                                           RR    KG       H +VV+ VAF+PLHP+L T S DG VRF+
Sbjct:  503 KDLDKPVTFHTRIKSSGYG-------SSSTPFGCRRTPPKSRTISRKSNSEFRAKNVSVTSTSAYLKEYPTSCGLLQHYQPKHALPPKTLHQGAILHIEYSSDAKWVATSGNDRVAQVCKLPFSRFRGEGNVFVGHDQAVRAVHWSQNDQMLVTVGSDKTSRLWLA-------------------------DSDTSSLTLQGLAPPSSVASAATAMGSMSSAKKA--TRQEIVEAQFFYMDKFLLSACGNLVRLHQFKLDEVYARASSSKTKHKKKNDVEVLENQSRKKRVAQWS----FDDMQSVTSLACVNGAFLSSVAVVAGSDRSLRVLDVGAGGGGRTVRVVRDAHGRAAQTVALPRPTCYASHPS---NFYDLLLSSAPDSTIHLWDIRADNC-VMRFCEHVNRVHTLGVAFSPCMRYVATGSEDRAAYIYDIRTG-------------------------------------------RRLTKLKG-------HSDVVTSVAFSPLHPQLATASCDGTVRFY 939          
The following BLAST results are available for this feature:
BLAST of NO17G00640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_022777610.11.000e-3325.68WD repeat-containing protein 27-like [Stylophora p... [more]
OQR82294.11.100e-3228.38hypothetical protein ACHHYP_16266 [Achlya hypogyna... [more]
OQR82105.11.300e-3132.19hypothetical protein THRCLA_11123 [Thraustotheca c... [more]
KOO33486.14.800e-3127.95wd repeat-containing protein 27-like protein [Chry... [more]
PFX32770.18.100e-3126.57WD repeat-containing protein 27 [Stylophora pistil... [more]
XP_020605902.11.100e-3025.58WD repeat-containing protein 27-like [Orbicella fa... [more]
CCA15622.13.100e-3026.16conserved hypothetical protein [Albugo laibachii N... [more]
CCA16317.13.100e-3026.16conserved hypothetical protein [Albugo laibachii N... [more]
OWZ22628.15.300e-3025.90hypothetical protein PHMEG_0002640 [Phytophthora m... [more]
POM78598.19.000e-3026.09G-protein beta WD-40 repeats containing protein [P... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004782NSK004782Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00640.1NO17G00640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|170012gene_7821Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00640.1NO17G00640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00640 ID=NO17G00640|Name=NO17G00640|organism=Nannochloropsis oceanica|type=gene|length=2249bp
GGGGAGTGGGGAAGGAGCGTGTTGGTGTTTAAGAAGATTGGCAGAGTTCC
CTCGAAGGAAAGGCAAGAATGATGATGCCTTGAATGTCGTGGATGGGGTG
GGTGGCGGCGCAAGGCTGGACACCAACATGCCGTGGACAAGCAGCCGAGA
AAAAGGAAAGCGAAACGCAAAAATGTGCGTGTTGAGTACGCAAAGTGTGG
CATGCAAGACACGCAAGGAGTGCAGGACGTAGGGAGCACAGAGTGGGTGG
AGAAGAGCGGTGGACGCTCGGGCGACATCTGCCTGTTGTTGGCGTCGACT
GAGACCGCCTCAACATCTTTTGCACCTCATCAATATCAAATTGGCAATTC
TAGCATTAGTATGTCATGGCTTTGCCCATAGGTCTATCATGCCCGGTTGT
CCATTAATATTTTTGTCCCACATACACCCAAAAGCCCGCTCGTCTGGCTG
CGCGAACAGGCCCATCAACCCCAACCTGAATGTTTTTTTCCTTCTTCCCA
TCGTCCGCCACGGCAGCCGATCCTTTGCCGAGCTCGTCCCCACTGCGTGT
TGGAAGAGCATTGACACGTATAGAAGCCCCTGCCTTGTCGGCTGCCACGG
CGTACGACTCTTTTTATGGCAGCAATCTTACCCAGAAGCTACGGGACAAA
TTTAAGCTAGTGGACAAACCGATTGTCTTCCACTCTAGAATCTCGTCGTC
AGGTTATGGCCAGCAACAAAAAATATCACATTCAAAAGCAAAGAAATATG
CGAACATGACTGCACCACCTTTGCCACTTATCCTGCCGCGGTATCCGATG
GAAGACGAAGATGGGCCGCCAACCGTGGCCTACTGGAGCCCTCGAGCATG
CGACATTCCTGGTCCCTCTTCAGCAGCACATGTGACGGCCTCGCCTCTCC
TAGACATGGCTTATAGTTATAAGGGTGATTTATTGGCCCTCGCAGCCATG
GACGGCACGGTTCAAGTTTTTCCCCTTGCCAAGTCTCGTCGCCGCCGACC
CCCTACTGTTTTCTCCGCATCAACTGCTCCTGTGCGTTCCGTTTCCCTCA
GCCACAGCCAAGAGCTGGTGTTGGCCTCTTCGGACGATGGGATAGCCAGT
CTTTTTTACATGGGGGAAATTTGTAATCGCAAAAATGCGAGCATGAGCCG
TCGTGTCTCTCCAGTGGTCCGCATTGACCCTTCCTTTTCATCTCCTCATA
TGTCGAAAAAGCAAAGCGGAGGTTGTCGCAACGACAGTATCGGTGGCAGC
TCCAGTTCCTTCACTTCGATATCAACGGTATCAAATACAGCCCCGTCTCC
TCCCGCCGTCACCGCTGTTTCATTCTTCTATCTGGATAGATACATACTCC
TCGCCTCACAGAATAAGCTCTCCCTGCATACCTACCACATTGCAATACCC
GCCAAAGACGCCTTGATCCGTCATCACAGCCGCTCCCTCTCCTCCTCGTC
TTCTTCAACTAGTCCTGCTGCTAATGCAACTCACACATTCCATGTGTGGG
TACACGATCACGCCCACCAATTAACTGCTGTTGCTTGTCTCAACAGCACC
CTCTCCCCTCTCATCCTCACTGCCTGCTCCGACCGCTCCTTCTCCCTCCT
CGACGCCACCCATGGAAGCTTCTTGCGTACATTTTTTGACGCGCATGCCC
GTTCCATCCACTCTCTAAGCGTGCCAAACTCCTCTCAATTCGTCGCGTCT
CCCTCCCTTCCTCCATCCCACCTGGACGTGTTTGCGAGTGCTGCTGCTGA
TAGCACGGTATCACTTTGGGACTTGAGAGCAGGAGCTGCCAAGATTGCTT
TTTTCAATGATCATATCAATCGACGAGAGAAGATTGGAGTCGCCTTTTCA
CCTTGTGTCAGATTTTTGGCCGTTGGGAGTGAGGATGGTGTGGCTTACGT
ATATGACTTGAGGAAGGGGAGGGAGACGGTATATACCACTAGCACTAGCA
GCAGCAGCAACACCACTAACAGCAGCAATAGCAGCAGCACCAGCAGCGAG
ATGATAAATGAAGGCAAGGGAGTTGACAATGAGGAGGATGGAAGGGAGAG
GCGGTGCCAAGGAAGGAAGGGAGGAAGGGCGGGACCGACGCCTCATGGCA
ACGTTGTTTCGTGCGTGGCTTTCAACCCGTTGCATCCCGAGCTGGTGACT
GGCTCTTACGATGGAGGGGTACGTTTTCACGATCGGGGTGAGTGATTGGT
TAATGAATTTGTTTGTGAAGTGGCTGGAAGGAAACAAGTCGTTCTGGCA
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protein sequence of NO17G00640.1

>NO17G00640.1-protein ID=NO17G00640.1-protein|Name=NO17G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MFFSFFPSSATAADPLPSSSPLRVGRALTRIEAPALSAATAYDSFYGSNL
TQKLRDKFKLVDKPIVFHSRISSSGYGQQQKISHSKAKKYANMTAPPLPL
ILPRYPMEDEDGPPTVAYWSPRACDIPGPSSAAHVTASPLLDMAYSYKGD
LLALAAMDGTVQVFPLAKSRRRRPPTVFSASTAPVRSVSLSHSQELVLAS
SDDGIASLFYMGEICNRKNASMSRRVSPVVRIDPSFSSPHMSKKQSGGCR
NDSIGGSSSSFTSISTVSNTAPSPPAVTAVSFFYLDRYILLASQNKLSLH
TYHIAIPAKDALIRHHSRSLSSSSSSTSPAANATHTFHVWVHDHAHQLTA
VACLNSTLSPLILTACSDRSFSLLDATHGSFLRTFFDAHARSIHSLSVPN
SSQFVASPSLPPSHLDVFASAAADSTVSLWDLRAGAAKIAFFNDHINRRE
KIGVAFSPCVRFLAVGSEDGVAYVYDLRKGRETVYTTSTSSSSNTTNSSN
SSSTSSEMINEGKGVDNEEDGRERRCQGRKGGRAGPTPHGNVVSCVAFNP
LHPELVTGSYDGGVRFHDRGE*
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Synonyms
Publications