NO17G00590, NO17G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00590 vs. NCBI_GenBank
Match: EWM21169.1 (40s ribosomal protein s0 [Nannochloropsis gaditana]) HSP 1 Score: 490.0 bits (1260), Expect = 5.100e-135 Identity = 246/287 (85.71%), Postives = 264/287 (91.99%), Query Frame = 0 Query: 1 MTQIDVPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATEPEMPDAAPVAPGVDDFGVVG-AGVVPSYGEPVSASWDGA-AAPVDQAGASSWEQPTESGWTN 286 MTQIDVPKALQPTDQD+HKLV+ASVHIGTKNSDKLMEPYIWRRR DNTYVLNLGKTWEKL+LAARVIVA+ENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLL+VTDPRTDSQ+VHEASYVNVPVIAFADSDSPLQ+VDIAIP NNKGRLSIGLLYWLLAREVLRLRGTISR +EWDVPVDLFFYREPDEIEK+E+KPA FA E E+ + AP+APG++DFG G AGVVP+YGEPVSASWDGA AAPVD + +GWTN Sbjct: 1 MTQIDVPKALQPTDQDIHKLVFASVHIGTKNSDKLMEPYIWRRRSDNTYVLNLGKTWEKLILAARVIVAVENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLVTDPRTDSQAVHEASYVNVPVIAFADSDSPLQFVDIAIPANNKGRLSIGLLYWLLAREVLRLRGTISRVDEWDVPVDLFFYREPDEIEKDEEKPATFAAEAEIAEPAPIAPGIEDFGAGGMAGVVPAYGEPVSASWDGAGAAPVDXXXXXXDQPADTAGWTN 287
BLAST of NO17G00590 vs. NCBI_GenBank
Match: CBJ28597.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 349.4 bits (895), Expect = 1.100e-92 Identity = 184/288 (63.89%), Postives = 215/288 (74.65%), Query Frame = 0 Query: 1 MTQIDVPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATEPEMPDAA-----PVAPGVDDFGVVG-AGVVPSYGEPVSASWDGAAAPVDQAGASSWEQPTESG 283 M +P L ++D+HK++ A VHIGT+NSD M+ YIWRRR D ++LN+GKTWEKLVLAAR+IVAIENP+DV+AISARPYGQRAVLKFAQYTG SIAGRFTPGTFTNQITKQFREPRLL++TDPR D+Q+V EASYVNVPVIAF DSDSPLQ VD+AIP NNKG+LSIGLLYWLLAREVLR+RGTI RT WDVPVDLFFYREP+E+EK E+ A F EP A+ P+A G + G A V P+ PV + A P A W+ +G Sbjct: 1 MASSSLPACLHAKEEDIHKMLAAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRTVAWDVPVDLFFYREPEELEKAEEAQAPF-QEPAAAAASGWGADPMAGGAAPTPMEGFAAVDPAAAAPVPVEYQ--APPQAAAMGGGWDAAPATG 285
BLAST of NO17G00590 vs. NCBI_GenBank
Match: GAX12300.1 (small subunit ribosomal protein SAe [Fistulifera solaris]) HSP 1 Score: 342.8 bits (878), Expect = 1.000e-90 Identity = 179/278 (64.39%), Postives = 211/278 (75.90%), Query Frame = 0 Query: 5 DVPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATEPEMPDAAPVAPGVDDFGVVGAGVVPSYGEPVSASWDGAAAPVDQAGASSWEQPTESG 283 ++P LQP ++D+ ++ A VH GT+NSD +M YIWRRRVD ++LN+G+TWEKL+LAARVIV+IENP DVIAISARPYG RA LKFA YTGAQSIAGRFTPGTFTNQITKQFREPRLL+VTDPRTDSQ+V EASYVN+PVIAF DSDSPLQYVDIAIP NNKG+LSIGLLYWLLAREVLRLRG+ISR E W+VPVDLFF+R+ +E++K E++ A E A G + A V+ +A DG A D GAS+WE G Sbjct: 6 NLPAVLQPKEEDIQMMLSAGVHTGTRNSDSMMTEYIWRRRVDGVHILNIGQTWEKLMLAARVIVSIENPADVIAISARPYGMRATLKFANYTGAQSIAGRFTPGTFTNQITKQFREPRLLIVTDPRTDSQAVKEASYVNIPVIAFCDSDSPLQYVDIAIPANNKGKLSIGLLYWLLAREVLRLRGSISRAEPWEVPVDLFFHRDVEELKKNEEEQQAKLDE---------AGGTGGYEAAPAEVMDPSQLVDTAGVDGYQA--DAYGASTWEGDQAGG 272
BLAST of NO17G00590 vs. NCBI_GenBank
Match: GAX21094.1 (small subunit ribosomal protein SAe [Fistulifera solaris]) HSP 1 Score: 340.1 bits (871), Expect = 6.600e-90 Identity = 178/278 (64.03%), Postives = 210/278 (75.54%), Query Frame = 0 Query: 5 DVPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATEPEMPDAAPVAPGVDDFGVVGAGVVPSYGEPVSASWDGAAAPVDQAGASSWEQPTESG 283 ++P LQP ++D+ ++ A VH GT+NSD +M YIWRRRVD ++LN+G+TWEKL+LAARVIV+IENP DVIAISARPYG RA LKFA YTGAQSIAGRFTPGTFTNQITKQFREPRLL+VTDPRTDSQ+V EASYVN+PVIA DSDSPLQYVDIAIP NNKG+LSIGLLYWLLAREVLRLRG+ISR E W+VPVDLFF+R+ +E++K E++ A E A G + A V+ +A DG A D GAS+WE G Sbjct: 6 NLPAILQPKEEDIQMMLSAGVHTGTRNSDSMMTEYIWRRRVDGVHILNIGQTWEKLMLAARVIVSIENPADVIAISARPYGMRATLKFANYTGAQSIAGRFTPGTFTNQITKQFREPRLLIVTDPRTDSQAVKEASYVNIPVIALCDSDSPLQYVDIAIPANNKGKLSIGLLYWLLAREVLRLRGSISRAEPWEVPVDLFFHRDVEELKKNEEEQQAKLDE---------AGGTGGYEAAPAEVMDPSQLVDTAGVDGYQA--DAYGASTWEGDQAGG 272
BLAST of NO17G00590 vs. NCBI_GenBank
Match: EJK48596.1 (hypothetical protein THAOC_32592 [Thalassiosira oceanica]) HSP 1 Score: 339.7 bits (870), Expect = 8.600e-90 Identity = 170/277 (61.37%), Postives = 211/277 (76.17%), Query Frame = 0 Query: 6 VPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATEPEMPDAAPVAPGVDDFGVVGAGVVPSYGEPVSASWDGAAAPVDQAGASSWEQPTESG 283 +P LQP ++D+ ++ A VH GT+NSD ME YIWRRR D +VLN+GKTWEK++LAARVIVAIENP+DV+AISARP+G RAVLKFA YTG+QSIAGRFTPGTFTNQITKQFREPRLL+VTDPRTDSQ+V E+SYVN+PVIAF DSDSPLQ+VDIAIP NNKG+ SIGL+YW+LAREVLRLRG++SR+ +WDVPVDLFF+R+ +E++K E++ AA + E A P+Y + V A PV +A A++ +P G Sbjct: 8 LPAVLQPKEEDIQMMLSAGVHTGTRNSDSAMEEYIWRRRKDGLHVLNIGKTWEKIMLAARVIVAIENPEDVVAISARPWGMRAVLKFAHYTGSQSIAGRFTPGTFTNQITKQFREPRLLIVTDPRTDSQAVRESSYVNIPVIAFCDSDSPLQHVDIAIPANNKGKHSIGLMYWMLAREVLRLRGSVSRSVDWDVPVDLFFHRDIEELKKTEEEQAAAKLQAEQQPA------------------PAYEQEVPAGDGAFEQPVPEAAAAATSEPAAEG 266
BLAST of NO17G00590 vs. NCBI_GenBank
Match: XP_009037182.1 (hypothetical protein AURANDRAFT_4875, partial [Aureococcus anophagefferens] >EGB07823.1 hypothetical protein AURANDRAFT_4875, partial [Aureococcus anophagefferens]) HSP 1 Score: 339.3 bits (869), Expect = 1.100e-89 Identity = 161/218 (73.85%), Postives = 192/218 (88.07%), Query Frame = 0 Query: 10 LQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATEPE 228 L P ++D+ K++ A HIGT+NSD +ME YIWRRR D +++N+GKTWEKL+LAARV+ AIENP+D+IAISARPYGQRAVLKFAQYTGA SIAGRFTPGTFTNQITKQF+EPR+LV+TDPRTDSQ+V EASYVN+PVIAF DSDSP Q+VD+AIP NNKG+LSIGLLYWLLARE+LR+RGT++R WDVPVDLFFYR+P+E+EK D+ AFA E E Sbjct: 2 LAPKEEDIQKMLSAQCHIGTRNSDHMMEEYIWRRRQDGIHIINVGKTWEKLMLAARVLTAIENPQDIIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFKEPRILVITDPRTDSQAVKEASYVNLPVIAFCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLAREMLRMRGTVARHAPWDVPVDLFFYRDPEELEK-ADEAQAFAAEQE 218
BLAST of NO17G00590 vs. NCBI_GenBank
Match: XP_002181180.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47103.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 337.0 bits (863), Expect = 5.600e-89 Identity = 160/215 (74.42%), Postives = 192/215 (89.30%), Query Frame = 0 Query: 6 VPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPA 221 +P+ LQP ++D+ ++ A VH GT+NSD M+ YIWRRR D ++LN+GKTWEKLVLAARVIVAIENP+DVIAISARPYG RAVLKFA YTGAQ++AGR+TPGTFTNQITKQF+EPRLL++TDPRTDSQ+V EASYVN+PVIAF DSDSPLQYVD+AIP NNKG+ SIGLLYWLLAREVLRLRG+ISR EW+VPVDLFF+R+P+E++K E++ A Sbjct: 7 LPEILQPKEEDIQMMLSAGVHTGTRNSDSNMQEYIWRRRNDGVHILNIGKTWEKLVLAARVIVAIENPEDVIAISARPYGMRAVLKFANYTGAQAVAGRWTPGTFTNQITKQFKEPRLLIITDPRTDSQAVKEASYVNIPVIAFCDSDSPLQYVDVAIPANNKGKYSIGLLYWLLAREVLRLRGSISR-NEWEVPVDLFFHRDPEELKKNEEEQA 220
BLAST of NO17G00590 vs. NCBI_GenBank
Match: OEU15655.1 (ribosomal protein S2 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 335.1 bits (858), Expect = 2.100e-88 Identity = 174/289 (60.21%), Postives = 206/289 (71.28%), Query Frame = 0 Query: 1 MTQIDVPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIE-------KEEDKPAAFATEPEMPDAAPVAPGVDDF------GVVGAGVVPSYGEPVSASWDGAAAPVDQA-GASSW 276 M +P LQP ++D+ ++ A VH GT+NSD ME YIWRRR D ++LN+GKTWEKL+LAARVIVAIENP+DVIAISARPYG RAVLKFAQYTGAQ++AGRFTPGTFTNQITKQFREPRLLV+TDPRTDSQSV E+SYVN+PVIAF DSDSPLQ+VDIAIP NNKG+ SIGL+YWLL+RE+LRLRG++SRT +WDVPVDLFF+R+ +E++ P D VAP D G P+ SW+G A A GA W Sbjct: 1 MNFASLPAVLQPKEEDIQMMLSAGVHTGTRNSDSAMEEYIWRRRNDGVHILNIGKTWEKLILAARVIVAIENPEDVIAISARPYGMRAVLKFAQYTGAQALAGRFTPGTFTNQITKQFREPRLLVITDPRTDSQSVRESSYVNLPVIAFCDSDSPLQFVDIAIPANNKGKYSIGLMYWLLSREILRLRGSVSRTSDWDVPVDLFFHRDVEELKXXXXXXXXXXXXXXXXXXXPTYDDVMAVAPATDAXXXXXXPAPTGGFEAPAAEGAFGTSWEGGQAGAAAASGAGDW 289
BLAST of NO17G00590 vs. NCBI_GenBank
Match: XP_002288449.1 (40S ribosomal protein-like protein [Thalassiosira pseudonana CCMP1335] >EED93885.1 40S ribosomal protein-like protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 332.0 bits (850), Expect = 1.800e-87 Identity = 155/208 (74.52%), Postives = 186/208 (89.42%), Query Frame = 0 Query: 6 VPKALQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIE 214 +P+ L P ++D+ ++ A VH GT+NSD ME YIWRRR D ++LN+GKTWEK++LAARVIVAIENP+DV+AISARP+G RAVLKFA YTGAQSIAGRFTPGTFTNQITKQFREPRLL+VTDPRTDSQ+V E+SYVN+PVIAF DSDSPLQ+VDIAIP NNKG+ SIGL+YWLLAREVLRLRG++SRT +WDVPVDLFF+R+ +E++ Sbjct: 7 LPQVLHPKEEDIQMMLSAGVHTGTRNSDSSMEEYIWRRRKDGLHILNIGKTWEKIMLAARVIVAIENPEDVVAISARPWGMRAVLKFAHYTGAQSIAGRFTPGTFTNQITKQFREPRLLIVTDPRTDSQAVRESSYVNIPVIAFCDSDSPLQFVDIAIPANNKGKHSIGLIYWLLAREVLRLRGSVSRTSDWDVPVDLFFHRDIEELK 214
BLAST of NO17G00590 vs. NCBI_GenBank
Match: OQR94016.1 (40S ribosomal protein SA [Thraustotheca clavata]) HSP 1 Score: 330.5 bits (846), Expect = 5.200e-87 Identity = 159/216 (73.61%), Postives = 185/216 (85.65%), Query Frame = 0 Query: 10 LQPTDQDMHKLVYASVHIGTKNSDKLMEPYIWRRRVDNTYVLNLGKTWEKLVLAARVIVAIENPKDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVHEASYVNVPVIAFADSDSPLQYVDIAIPGNNKGRLSIGLLYWLLAREVLRLRGTISRTEEWDVPVDLFFYREPDEIEKEEDKPAAFATE 226 L ++D+ K++ A VHIGT+N+D M YIWRRR D +++N+GKTWEKL+LAA+VIVAIENP DVIAISARPYGQRAVLKFAQYTG +IAGRFTPGTFTNQITKQFREPRLL++TDPRTD+Q V E++YVNVPVIAF DSDSPL+YVD+AIP NNKG+LSIGLLYWLLAREVLRLRGTISR WDV VDLFFYR+P+E+EK E+ A E Sbjct: 2 LTQREEDIQKMLAAMVHIGTRNADAQMGEYIWRRRNDGIHIINVGKTWEKLMLAAKVIVAIENPADVIAISARPYGQRAVLKFAQYTGCNAIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQPVRESAYVNVPVIAFCDSDSPLRYVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRALPWDVAVDLFFYRDPEELEKAEEAQTGAADE 217 The following BLAST results are available for this feature:
BLAST of NO17G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00590 ID=NO17G00590|Name=NO17G00590|organism=Nannochloropsis oceanica|type=gene|length=1747bpback to top protein sequence of NO17G00590.1 >NO17G00590.1-protein ID=NO17G00590.1-protein|Name=NO17G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top Synonyms
Publications
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