NO16G02730, NO16G02730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02730 vs. NCBI_GenBank
Match: EWM23839.1 (cdk-activating kinase assembly factor mat1 [Nannochloropsis gaditana]) HSP 1 Score: 334.7 bits (857), Expect = 3.400e-88 Identity = 235/337 (69.73%), Postives = 262/337 (77.74%), Query Frame = 0 Query: 15 MAVKCSACDQRQDALDNLSRKRFKINTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREEDRRRSEXXXXXXXXXWAEQVKLAXXXXXXXXXXXXXXRLQVQQRNLGERDAVTIKLEEPLGRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGMSGASVFHTSLRVLVGDQPKIVEVEGGRAXXXXXXXXAVAKASGWPISLRYKRCWEEAVASLFEMSTEARGRLGRTFYR 352 M VKC+AC+QR+DALDNLSRKRFKINT+CGHYFCD CIQREFARKTRG FRCPACA++G+DREVLRQSLET XXXXXXXXXXXXX EVYGK+EE+FGG+E+AYNDY+E+REDLIYTLANRLF+DENEV++AE RLE ERK N AVA+Y+ARREEDRRRS WAEQV+ A RLQ+QQ+NLGERD VT++L +GRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MSGAS F T+LRVLVG P+IV XXXXXXXX YKRCWEEA+ASLF S E RGRLGRTFYR Sbjct: 20 MTVKCAACEQREDALDNLSRKRFKINTSCGHYFCDTCIQREFARKTRGGFRCPACARLGKDREVLRQSLETXXXXXXXXXXXXXXXXXXXEVYGKKEEDFGGNEDAYNDYIEEREDLIYTLANRLFIDENEVREAEIRLEKERKTNEVAVARYRARREEDRRRSARAVESFEQEWAEQVRRAHEQEKRELEKLREFRLQIQQKNLGERDQVTVEL---VGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGASAFCTNLRVLVGPPPRIVVXXXXXXXXXXXXXXXXXXXXXXXXXXXYKRCWEEAIASLFLGSGETRGRLGRTFYR 353
BLAST of NO16G02730 vs. NCBI_GenBank
Match: EWM23840.1 (cdk-activating kinase assembly factor mat1 [Nannochloropsis gaditana]) HSP 1 Score: 271.2 bits (692), Expect = 4.600e-69 Identity = 207/304 (68.09%), Postives = 230/304 (75.66%), Query Frame = 0 Query: 48 CDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREEDRRRSEXXXXXXXXXWAEQVKLAXXXXXXXXXXXXXXRLQVQQRNLGERDAVTIKLEEPLGRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGMSGASVFHTSLRVLVGDQPKIVEVEGGRAXXXXXXXXAVAKASGWPISLRYKRCWEEAVASLFEMSTEARGRLGRTFYR 352 CD CIQREFARKTRG FRCPACA++G+DREVLRQSLET XXXXXXXXXXXXX EVYGK+EE+FGG+E+AYNDY+E+REDLIYTLANRLF+DENEV++AE RLE ERK N AVA+Y+ARREEDRRRS WAEQV+ A RLQ+QQ+NLGERD VT++L +GRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MSGAS F T+LRVLVG P+IV XXXXXXXX YKRCWEEA+ASLF S E RGRLGRTFYR Sbjct: 34 CDTCIQREFARKTRGGFRCPACARLGKDREVLRQSLETXXXXXXXXXXXXXXXXXXXEVYGKKEEDFGGNEDAYNDYIEEREDLIYTLANRLFIDENEVREAEIRLEKERKTNEVAVARYRARREEDRRRSARAVESFEQEWAEQVRRAHEQEKRELEKLREFRLQIQQKNLGERDQVTVEL---VGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGASAFCTNLRVLVGPPPRIVVXXXXXXXXXXXXXXXXXXXXXXXXXXXYKRCWEEAIASLFLGSGETRGRLGRTFYR 334
BLAST of NO16G02730 vs. NCBI_GenBank
Match: XP_005854607.1 (hypothetical protein NGA_0210400, partial [Nannochloropsis gaditana CCMP526] >EKU21759.1 hypothetical protein NGA_0210400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 95.9 bits (237), Expect = 2.700e-16 Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 0 Query: 15 MAVKCSACDQRQDALDNLSRKRFKINTACGHYFCDACIQREFARKTR 62 M VKC+AC+QR+DALDNLSRKRFKINT+CGHYFCD CIQREFARKTR Sbjct: 1 MTVKCAACEQREDALDNLSRKRFKINTSCGHYFCDTCIQREFARKTR 47
BLAST of NO16G02730 vs. NCBI_GenBank
Match: CBN76806.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.7 bits (208), Expect = 6.100e-13 Identity = 70/215 (32.56%), Postives = 104/215 (48.37%), Query Frame = 0 Query: 19 CSACDQRQDALDNLSRKRFKINTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREEDRRRSEXXXXXXXXXWAEQVKLAXXXXXXXXXXXXXXRLQVQQRNLGERDAVTIKLEEPL 234 C C QD N+++++ +N CGH F AC ++E R R F CPAC +V R L KT + + +++ + EE+FGGD AYNDY+E ED+IY L + D+ E +A+ + + + K AR+ + + E + XXXXXXXXXXX +L+ Q+ LGERD VT + + L Sbjct: 7 CVLCKGAQDEASNITQQKLVVNNKCGHRFHQACAEKELLR--RKTFPCPAC-----QVQVRRAGLTEKTLDELEVARDITVRKRITKIFNRSEEDFGGDLRAYNDYLETMEDVIYGLCSG---DKGEADRAQATVREYEDRHRGEITKNAARKVDREKVVEEQLAALRQQQESRKHYNXXXXXXXXXXXRKLKLEAQEVALGERDHVTATMGDGL 211
BLAST of NO16G02730 vs. NCBI_GenBank
Match: XP_024577597.1 (cdk-activating kinase assembly factor mat1 [Plasmopara halstedii] >CEG41228.1 cdk-activating kinase assembly factor mat1 [Plasmopara halstedii]) HSP 1 Score: 72.4 bits (176), Expect = 3.100e-9 Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 0 Query: 15 MAVKCSACDQR-QDALDNLSRKRFKINTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREEDRRR 178 +A++C C +D + L+ K + + CGH FCD CI+REF + A CPAC K V + L+ KT E V + Y K E++F +E YNDY+E E+LI+ L ++ D+ E A+ + + R+ NA +A A++ ++ RR Sbjct: 10 LAMRCCVCGTSVEDDSNYLNTKMKMLISKCGHRFCDHCIKREFQHQREIA--CPACQK-----SVKKSQLQDKTIEELNYVKETSVRKKVTKDYNKTEDDFDTLDE-YNDYLEMLENLIFDL---VYGDDAEKAAAQKQWKQYRQENAIVIATNDAKKADEERR 162
BLAST of NO16G02730 vs. NCBI_GenBank
Match: XP_008902642.1 (hypothetical protein PPTG_09394 [Phytophthora parasitica INRA-310] >ETI51437.1 hypothetical protein F443_05201 [Phytophthora parasitica P1569] >ETL44720.1 hypothetical protein L916_05023 [Phytophthora parasitica] >ETM51051.1 hypothetical protein L914_05019 [Phytophthora parasitica] >ETN11680.1 hypothetical protein PPTG_09394 [Phytophthora parasitica INRA-310] >ETP21213.1 hypothetical protein F441_05201 [Phytophthora parasitica CJ01A1] >ETP49141.1 hypothetical protein F442_05249 [Phytophthora parasitica P10297] >KUF85988.1 hypothetical protein AM588_10001059 [Phytophthora nicotianae] >KUF87089.1 CDK-activating kinase assembly factor MAT1 [Phytophthora nicotianae]) HSP 1 Score: 70.9 bits (172), Expect = 9.200e-9 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 0 Query: 15 MAVKCSAC-DQRQDALDNLSRKRFKINTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVA 166 +A++C C +D + L+ K + + CGH FCD CI+REF + CPAC K V + L+ KT E V + Y K E++F +E YNDY+E E+LI+ L ++ D+ E A+ + + R+ NA A+A Sbjct: 10 LALRCCVCGTSAEDDSNYLNTKMKMLISKCGHRFCDHCIKREFQHQRE--ISCPACQK-----PVKKSQLQDKTIEELNFAKETSVRKKVTKDYNKTEDDFDTLDE-YNDYLEMLENLIFDL---VYGDDTEKAAAQKQWKQYRQENAIAIA 150
BLAST of NO16G02730 vs. NCBI_GenBank
Match: ETK91318.1 (hypothetical protein L915_05066 [Phytophthora parasitica] >ETL97891.1 hypothetical protein L917_04906 [Phytophthora parasitica] >ETO80190.1 hypothetical protein F444_05233 [Phytophthora parasitica P1976]) HSP 1 Score: 70.9 bits (172), Expect = 9.200e-9 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 0 Query: 15 MAVKCSAC-DQRQDALDNLSRKRFKINTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVA 166 +A++C C +D + L+ K + + CGH FCD CI+REF + CPAC K V + L+ KT E V + Y K E++F +E YNDY+E E+LI+ L ++ D+ E A+ + + R+ NA A+A Sbjct: 10 LALRCCVCGTSAEDDSNYLNTKMKMLISKCGHRFCDHCIKREFQHQRE--ISCPACQK-----PVKKSQLQDKTIEELNFAKETSVRKKVTKDYNKTEDDFDTLDE-YNDYLEMLENLIFDL---VYGDDTEKAAAQKQWKQYRQENAIAIA 150
BLAST of NO16G02730 vs. NCBI_GenBank
Match: GAX23569.1 (CDK-activating kinase assembly factor MAT1 [Fistulifera solaris]) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-8 Identity = 60/216 (27.78%), Postives = 102/216 (47.22%), Query Frame = 0 Query: 18 KCSACDQRQDALDNLSRKRFKINTA---CGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREEDRRRSEXXXXXXXXXWAEQVK-LAXXXXXXXXXXXXXXRLQVQQRNLGERDAVTIKL 230 +C+ C + NL+ + + A CGH FC +C+ REFAR R F CP C+ M V R +L +T + VL+VY K E +F E YN+Y+E ED+I+++ N +E ++ + ++++ + N +A+ +++R D RS AEQ++ LA + + + LGER+ V+ +L Sbjct: 7 RCAICGTTEGDSSNLTSQASLMTNATVKCGHQFCQSCVDREFAR--RREFPCPVCSTM-----VKRVTLTQRTLDDVQCEKDTSWRRRVLKVYNKTEADFETLLE-YNNYLEMVEDMIFSIVN----EEPNAEECKNKIKDYEQANKSAIVIRQSQR-ADEERSIQDRIAAEQREAEQMRLLAQEDEKYMAQAKRKWKQESTEVLLGEREEVSAEL 209
BLAST of NO16G02730 vs. NCBI_GenBank
Match: OWZ20715.1 (hypothetical protein PHMEG_0004830 [Phytophthora megakarya]) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-8 Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 0 Query: 15 MAVKCSACDQR-QDALDNLSRKRFKINTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREEDRRR 178 +A++C C +D + L+ K + + CGH FCD CI+REF + A CPAC K V + L+ KT E V + Y K E++F +E YNDY+E E+LI+ L ++ D+ E A+ + + R NA +A A++ ++ RR Sbjct: 10 LALRCCVCGTSVEDDSNYLNTKMKMLISKCGHRFCDHCIKREFQHQREIA--CPACQK-----PVKKSQLQDKTIEELNFAKETSVRKKVTKDYNKTEDDFDTLDE-YNDYLEMLENLIFDL---VYGDDVEKAAAQKQWKQYRLENAIVIATNDAKKADEERR 162
BLAST of NO16G02730 vs. NCBI_GenBank
Match: XP_008607034.1 (hypothetical protein SDRG_03188 [Saprolegnia diclina VS20] >EQC39762.1 hypothetical protein SDRG_03188 [Saprolegnia diclina VS20]) HSP 1 Score: 70.1 bits (170), Expect = 1.600e-8 Identity = 52/159 (32.70%), Postives = 76/159 (47.80%), Query Frame = 0 Query: 16 AVKCSACDQRQDALDNLSRKRFKI-NTACGHYFCDACIQREFARKTRGAFRCPACAKMGRDREVLRQSLETKTREXXXXXXXXXXXXXVLEVYGKREEEFGGDEEAYNDYVEKREDLIYTLANRLFLDENEVKQAETRLENERKLNAAAVAKYKARREE 174 A KC C D N+ R KI + CGH +CD C++REF R CAK G + + + L+ KT+E VL+ Y K E+F +E YN Y+E+ EDLI+ L L DE E + A+ + + + NA + A++ E Sbjct: 9 AAKCCVCGTAADDDSNILNTRMKILISKCGHRYCDQCVKREFQH-----HREITCAKPGCGKPIKKSQLQDKTKEEQDFAKDIAIRKKVLKTYNKTGEDFNTLDE-YNAYLEEVEDLIFAL---LSDDEAEKETAQKKWKQYKMENAILINANDAKKAE 158 The following BLAST results are available for this feature:
BLAST of NO16G02730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02730 ID=NO16G02730|Name=NO16G02730|organism=Nannochloropsis oceanica|type=gene|length=1564bpback to top protein sequence of NO16G02730.1 >NO16G02730.1-protein ID=NO16G02730.1-protein|Name=NO16G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bpback to top Synonyms
Publications
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