Naga_100273g5, gene6620 (gene) Nannochloropsis gaditana

Overview
NameNaga_100273g5
Unique Namegene6620
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:634789..636923 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100273g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:634789..636923 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0006259DNA metabolic process
GO:0006950response to stress
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016301kinase activity
GO:0030234enzyme regulator activity
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL034ngnoL034Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL032ngnoL032Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02730NO16G02730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6848rna6848-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6849rna6849-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6848rna6848Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6849rna6849Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6848

>rna6848-protein ID=rna6848-protein|Name=rna6848|organism=Nannochloropsis gaditana|type=polypeptide|length=334bp
MYSYKVDAGGSCFVRPFPPSLPHSLLFLFPLPSCDTCIQREFARKTRGGF
RCPACARLGKDREVLRQSLETKSREQLMVELDTKWRERVLEVYGKKEEDF
GGNEDAYNDYIEEREDLIYTLANRLFIDENEVREAEIRLEKERKTNEVAV
ARYRARREEDRRRSARAVESFEQEWAEQVRRAHEQEKRELEKLREFRLQI
QQKNLGERDQVTVELVGRGGGGRADGEEEEEDEDVARALGREGGRGGGLE
GGGAGMSGASAFCTNLRVLVGPPPRIVVVEGGRETGGEGGKEGIAKASGW
PLSLRYKRCWEEAIASLFLGSGETRGRLGRTFYR
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protein sequence of rna6849

>rna6849-protein ID=rna6849-protein|Name=rna6849|organism=Nannochloropsis gaditana|type=polypeptide|length=353bp
MVGPAREGKNGKVEEEDDEMTVKCAACEQREDALDNLSRKRFKINTSCGH
YFCDTCIQREFARKTRGGFRCPACARLGKDREVLRQSLETKSREQLMVEL
DTKWRERVLEVYGKKEEDFGGNEDAYNDYIEEREDLIYTLANRLFIDENE
VREAEIRLEKERKTNEVAVARYRARREEDRRRSARAVESFEQEWAEQVRR
AHEQEKRELEKLREFRLQIQQKNLGERDQVTVELVGRGGGGRADGEEEEE
DEDVARALGREGGRGGGLEGGGAGMSGASAFCTNLRVLVGPPPRIVVVEG
GRETGGEGGKEGIAKASGWPLSLRYKRCWEEAIASLFLGSGETRGRLGRT
FYR
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Synonyms
Publications