NO16G01470, NO16G01470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01470 vs. NCBI_GenBank
Match: EWM23943.1 (pstvd rna-biding virp1 [Nannochloropsis gaditana]) HSP 1 Score: 180.6 bits (457), Expect = 1.200e-41 Identity = 86/134 (64.18%), Postives = 104/134 (77.61%), Query Frame = 0 Query: 373 ISDKMVKRCNQMLKDLRDRGSHSLNWFLNPVTEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYKRACSELKTGYHDDASSVGSASAGKGGGEEG 507 IS+KM +RC QMLKDL+DRG + NWFL PVTE EAPGYF +IE PMDL VD LR K +RDLH+FAAD+RLVFTNAMRFN +ESSVY+DAQK + IFND+Y++AC++LKT D S S S+G G G+ G Sbjct: 10 ISEKMARRCWQMLKDLKDRGQQACNWFLRPVTEEEAPGYFQVIENPMDLATVDKKLRHKLHRDLHDFAADVRLVFTNAMRFNPAESSVYLDAQKLMGIFNDMYRKACADLKTNQSDAGSLASSVSSGGGIGKAG 143
BLAST of NO16G01470 vs. NCBI_GenBank
Match: EJK59739.1 (hypothetical protein THAOC_19998, partial [Thalassiosira oceanica]) HSP 1 Score: 84.3 bits (207), Expect = 1.200e-12 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 0 Query: 86 GAPYLMGELLRDVHGDHIFKGSWSMS----YAGFHGPNPVTSEFELKHKSLDPDDTE--IFPFGGAYSGWYKLKEQGARKDVKHEERDVQLAFQRNLAGGYNVQGLGKNQYGQYKIKGLLTDVKTDT 207 G L G+L R + G H G+W++ A V +FE +H S P E FP G+YSGW+ + + K VK E+DV+L + +N GGYNVQG G N YG++ +KGLLT T T Sbjct: 1341 GVVSLRGKLTRHIDGTHKIAGTWALGLDTILADPDNSKGVALDFEYEH-SPSPAAAEGLDFPSSGSYSGWFHILGENGCK-VKSPEKDVELKYVKNSQGGYNVQGQGSNVYGKFTVKGLLTQDGTIT 1465
BLAST of NO16G01470 vs. NCBI_GenBank
Match: XP_010943965.1 (PREDICTED: transcription factor GTE9 isoform X1 [Elaeis guineensis]) HSP 1 Score: 78.6 bits (192), Expect = 6.500e-11 Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0 Query: 388 LRDRGSHSLNWFLN-PV--TEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYK 477 LR +HS W N PV + P YFSII KPMDL V + L K Y H+FAAD++L F+NAMR+N + V+I A++ NIF+ +K Sbjct: 174 LRKLMNHSFGWVFNQPVDPVKLNIPDYFSIISKPMDLGTVKHKLSSKQYSSTHQFAADIKLTFSNAMRYNPPGNDVHIMAKELDNIFSSRWK 265
BLAST of NO16G01470 vs. NCBI_GenBank
Match: XP_010943966.1 (PREDICTED: transcription factor GTE9 isoform X2 [Elaeis guineensis]) HSP 1 Score: 78.6 bits (192), Expect = 6.500e-11 Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0 Query: 388 LRDRGSHSLNWFLN-PV--TEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYK 477 LR +HS W N PV + P YFSII KPMDL V + L K Y H+FAAD++L F+NAMR+N + V+I A++ NIF+ +K Sbjct: 152 LRKLMNHSFGWVFNQPVDPVKLNIPDYFSIISKPMDLGTVKHKLSSKQYSSTHQFAADIKLTFSNAMRYNPPGNDVHIMAKELDNIFSSRWK 243
BLAST of NO16G01470 vs. NCBI_GenBank
Match: OVA19354.1 (Bromodomain [Macleaya cordata]) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-10 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 0 Query: 373 ISDKMVKRCNQMLKDLRDRGSHSLNWFLN-PV--TEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYK 477 I +++ K C ++LK L +HS W N PV + + P YF II +PMDL + L K Y D FA+D+RL F+NAMR+N + ++I A K IF ++K Sbjct: 272 IDNRLTKECTEILKKLM---THSFGWVFNLPVDPVKLKIPDYFCIISEPMDLGTIKYKLEKKLYLDTKAFASDVRLTFSNAMRYNPPGNDIHIMASKLNIIFESLWK 375
BLAST of NO16G01470 vs. NCBI_GenBank
Match: XP_001735535.1 (bromodomain-containing factor [Entamoeba dispar SAW760] >EDR28252.1 bromodomain-containing factor, putative [Entamoeba dispar SAW760]) HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10 Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = 0 Query: 373 ISDKMVKRCNQMLKDLRDR-GSHSLNWFLNPVTEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYKRACSELKTG 486 ++ + +++C ++ + L ++ S + N ++PV + P YFS+I++PMDL + +NL DK Y EF AD+ LVF NA+ FN +S VY A K F ++K A E KTG Sbjct: 95 MTSEELRKCKELNRKLMNQPESPAFNTPVDPVA-LQVPTYFSVIKRPMDLGTIKHNLSDKKYITKEEFQADMLLVFDNALLFNHPDSEVYHWAVKLKKQFETLWKNAFKEKKTG 207
BLAST of NO16G01470 vs. NCBI_GenBank
Match: OAY84781.1 (Transcription factor GTE9 [Ananas comosus]) HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10 Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 0 Query: 378 VKRCNQMLKDLRDRGSHSLNWFLN-PV--TEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYK 477 ++ C +LK L +H W N PV + P YFSII KPMDL V+ L K Y H+FAAD+RL F+NAMR+N + V+I A + N+FN +K Sbjct: 152 MRLCANILKKLM---NHRYGWVFNQPVDPVKLNIPDYFSIISKPMDLGTVNKKLMSKLYVSTHQFAADVRLTFSNAMRYNPPGNDVHIMALELNNLFNLAWK 250
BLAST of NO16G01470 vs. NCBI_GenBank
Match: XP_020095812.1 (transcription factor GTE9-like [Ananas comosus]) HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10 Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 0 Query: 378 VKRCNQMLKDLRDRGSHSLNWFLN-PV--TEAEAPGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYK 477 ++ C +LK L +H W N PV + P YFSII KPMDL V+ L K Y H+FAAD+RL F+NAMR+N + V+I A + N+FN +K Sbjct: 65 MRLCANILKKLM---NHRYGWVFNQPVDPVKLNIPDYFSIISKPMDLGTVNKKLMSKLYVSTHQFAADVRLTFSNAMRYNPPGNDVHIMALELNNLFNLAWK 163
BLAST of NO16G01470 vs. NCBI_GenBank
Match: KMZ63855.1 (hypothetical protein ZOSMA_393G00070 [Zostera marina]) HSP 1 Score: 76.3 bits (186), Expect = 3.200e-10 Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 0 Query: 373 ISDKMVKRCNQMLKDLRDRGSHSLNWFLN-PVTEAE--APGYFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFN 473 I D VK+C +L+ L +H W N PV + P YFSII KPMDL + L Y + EF D+RL F NAM++N S + V+I A K NIFN Sbjct: 79 IDDYQVKQCLLILEKLM---NHKFGWIFNQPVDPVKLMIPDYFSIISKPMDLGSIKKKLETMEYNFVTEFIDDVRLTFANAMQYNPSSNDVHIIANKLNNIFN 178
BLAST of NO16G01470 vs. NCBI_GenBank
Match: XP_012547849.1 (homeotic protein female sterile isoform X4 [Bombyx mori]) HSP 1 Score: 75.9 bits (185), Expect = 4.200e-10 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 0 Query: 378 VKRCNQMLKDLRDRGSHSLNW-FLNPVTEAEAPG---YFSIIEKPMDLRKVDNNLRDKAYRDLHEFAADLRLVFTNAMRFNASESSVYIDAQKSLNIFNDIYKRACSE 482 +K CN++LK+L + W F PV +AE G YF II+KPMDL V N + +AY+ EFAAD+RL+FTN ++N + V A+K ++F Y + E Sbjct: 377 LKSCNEILKELFSKKHSGYAWPFYKPV-DAELLGLHDYFDIIKKPMDLGTVKNKMDGRAYKSAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKIPDE 483 The following BLAST results are available for this feature:
BLAST of NO16G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01470 ID=NO16G01470|Name=NO16G01470|organism=Nannochloropsis oceanica|type=gene|length=1888bpback to top protein sequence of NO16G01470.1 >NO16G01470.1-protein ID=NO16G01470.1-protein|Name=NO16G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=522bpback to top Synonyms
Publications
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