NO16G00090, NO16G00090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00090 vs. NCBI_GenBank
Match: CBJ29374.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 251.5 bits (641), Expect = 5.300e-63 Identity = 126/260 (48.46%), Postives = 169/260 (65.00%), Query Frame = 0 Query: 234 VEGTGTAEGDGWVVGEVTDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMSHADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQVIFTAEKSMIFPVVLPPS-------DVAFPVPIPPRHLEEHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGGRLAA 487 VEG T G V+G V +HA+N+ +RPG+ I IPYE+T+ RDFWQ+ F +HDR+NTSTPFAR LG QDQVLPFSLMLFL+ SMSH ++A QV ++N Y WP FAGDT TK F I+ +R S + S + F+C L NQR +V +++ +FP PPS P P P L +H+V +++ L LG Q+L+ GQL++H+ ARP+S +QSM+LSSL RLTH RHF+T K + + IP G + A Sbjct: 22 VEG-DTTHKSGRVLGRVLEHAVNVKRLRPGDTIRIPYEVTVGYGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKAFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDSTATPEEQPPPKPADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVA 280
BLAST of NO16G00090 vs. NCBI_GenBank
Match: EWM20140.1 (hypothetical protein Naga_101578g1 [Nannochloropsis gaditana]) HSP 1 Score: 207.2 bits (526), Expect = 1.100e-49 Identity = 99/121 (81.82%), Postives = 106/121 (87.60%), Query Frame = 0 Query: 213 RDAGPPINAAFFKVDGANPPA--VEGTGTAEGDGWVVGEVTDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMSHADSATVQV 332 ++ PP+NAAFFKVDGA PP+ G GWVVGEVTDHAI+LHDVRPGE ID+PYELTI+PSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMSHADSATVQV Sbjct: 69 KNVSPPLNAAFFKVDGATPPSHTPPSQGEESSGGWVVGEVTDHAIDLHDVRPGEAIDVPYELTINPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMSHADSATVQV 189
BLAST of NO16G00090 vs. NCBI_GenBank
Match: EWM22823.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 165.6 bits (418), Expect = 3.800e-37 Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 0 Query: 389 MIFPVVLPPSDVAFPVPIPPRHLEEHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGG 483 MIFP+VLP S+V FPV +PPR LEEHLVSRADSLH LGSQSLQSLRPGQLLLHSLARPLS +QSMQLSSLGRLTHERHFNTRKFKR+EMYIPGG Sbjct: 1 MIFPIVLPASNVTFPVAVPPRLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGG 94
BLAST of NO16G00090 vs. NCBI_GenBank
Match: OUX69354.1 (hypothetical protein CBD00_05850 [Rhodospirillaceae bacterium TMED140]) HSP 1 Score: 137.9 bits (346), Expect = 8.500e-29 Identity = 87/255 (34.12%), Postives = 132/255 (51.76%), Query Frame = 0 Query: 246 VVGEVTDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMS---HADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQVIFTAEKSMIFPVVLP-------PSDVA---FPVPIPPRHLEEHLVSRADSLHILGSQSL-QSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGGRLAA 487 + V + I+L +RPG+V++ PY LTI +R WQS F++ + L TS FAR LG D++LP+SL+L LT MS ++S + +G + + PAF GDT R ++ SVR + SV L NQR + +F+ K F V P P V P R L E ++ + S+ L GQL+LH RP+ S+++ LS+L R TH HF+ +++ RE++ + GG + A Sbjct: 340 ISASVPRYGIDLTYLRPGQVLESPYALTIDDGWRATWQSAFHASNHLETSVEFARSLGVADRMLPYSLLLNLTLCMSVEPFSESCRLHLGLHDAVAERPAFVGDTFXNRILVESVRNTARGDASVIRTRHVLINQRGERVFSLTKMSYFDPVAPACVGAIEPGAVGGDFAAAAAPDRSLRERMIEAVGAGRPANPASIAPDLTAGQLILHPPVRPIGWSENLGLSTLLRNTHPLHFDAQRYGREDIVVCGGFVQA 594
BLAST of NO16G00090 vs. NCBI_GenBank
Match: OUU24063.1 (hypothetical protein CBC13_04145 [Planctomycetia bacterium TMED53]) HSP 1 Score: 116.3 bits (290), Expect = 2.600e-22 Identity = 73/244 (29.92%), Postives = 127/244 (52.05%), Query Frame = 0 Query: 248 GEVTDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMS---HADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQVIFTAEKSMIFPVVLPPSDVAFPVPIP---PRHLE---EHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGG 483 GE+ + ++L R G++++ PYE+T+ S+R WQSVF + +L TS +A+ GF +P +++L +T S + S + +G +N PA GDT I S+ S SV + L NQRD+ +F+ +K + LP +DV P+ H E + L+ D + S ++ L+ G+L++H + RPL S+++ LS+ R TH H+++ + R+ + + GG Sbjct: 3 GEIPKYGLDLKTARTGQILESPYEITVDDSWRCQWQSVFPTASKLTTSREYAKACGFNAIPIPQAMLLNMTLCFSVEPFSQSCRLHLGLENARQELPASFGDTFRSFTKIESLANTSRGDASVIHTTHILVNQRDERVFSLKKRSYYE-PLPNNDVIEPIQESDGMASHFETPTKSLIDHYDGIKEFPSAQIEPLKAGRLIIHPMVRPLGWSENLALSTTYRNTHPIHWDSTSYGRDGIVVCGG 245
BLAST of NO16G00090 vs. NCBI_GenBank
Match: AKQ67210.1 (Citrate lyase beta chain [Myxococcus hansupus]) HSP 1 Score: 108.6 bits (270), Expect = 5.500e-20 Identity = 87/275 (31.64%), Postives = 127/275 (46.18%), Query Frame = 0 Query: 216 GPPINAAFFKVDGANP-PAVEGTGTAEGDGWVVGEVTDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGF---QDQVLPFSLMLFLTGSMSHADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQV-IFTAEKSMIFPVVLPPSDVAFPVPIPPRHLEE-----------HLVSRADSLHILGSQS--LQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKF 473 GPP A ++ G P A G+G VVG HA++ R + + PYE+T + RD W FYSHDR+ TS PFA +LG + LPF + L+L MS A +GF+N P GDT + +R+VR K +V + +L D V +FT +K ++ +FPV R E+ L+ RA L +S QS G+LLLHS ARP+ + ++ LS+ +TH H + ++ Sbjct: 296 GPPHLKAAHRLLGLAPLRATAGSGDV-----VVGRHVSHALD-RPTRADDRLPNPYEMTATAGMRDLWVQSFYSHDRIVTSAPFAARLGLTTPETMPLPFMMGLYLAVCMSATHGAIYHLGFRNARQLAPLRVGDTYRQDIQVRAVRNTGDGKRAVVTTHRQLVRVSDGVPVFTVDKRELY----HRQPESFPVSSAARQQEQAEHEKAQIFRAELLRRASDLPPSADKSGAGQSFTEGELLLHSFARPMGITANLALSTQFMVTHPIHLDHHRY 560
BLAST of NO16G00090 vs. NCBI_GenBank
Match: WP_082282776.1 (hypothetical protein [Myxococcus hansupus]) HSP 1 Score: 108.6 bits (270), Expect = 5.500e-20 Identity = 87/275 (31.64%), Postives = 127/275 (46.18%), Query Frame = 0 Query: 216 GPPINAAFFKVDGANP-PAVEGTGTAEGDGWVVGEVTDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGF---QDQVLPFSLMLFLTGSMSHADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQV-IFTAEKSMIFPVVLPPSDVAFPVPIPPRHLEE-----------HLVSRADSLHILGSQS--LQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKF 473 GPP A ++ G P A G+G VVG HA++ R + + PYE+T + RD W FYSHDR+ TS PFA +LG + LPF + L+L MS A +GF+N P GDT + +R+VR K +V + +L D V +FT +K ++ +FPV R E+ L+ RA L +S QS G+LLLHS ARP+ + ++ LS+ +TH H + ++ Sbjct: 302 GPPHLKAAHRLLGLAPLRATAGSGDV-----VVGRHVSHALD-RPTRADDRLPNPYEMTATAGMRDLWVQSFYSHDRIVTSAPFAARLGLTTPETMPLPFMMGLYLAVCMSATHGAIYHLGFRNARQLAPLRVGDTYRQDIQVRAVRNTGDGKRAVVTTHRQLVRVSDGVPVFTVDKRELY----HRQPESFPVSSAARQQEQAEHEKAQIFRAELLRRASDLPPSADKSGAGQSFTEGELLLHSFARPMGITANLALSTQFMVTHPIHLDHHRY 566
BLAST of NO16G00090 vs. NCBI_GenBank
Match: PRZ02290.1 (acyl dehydratase [Marinilabilia salmonicolor]) HSP 1 Score: 101.3 bits (251), Expect = 8.800e-18 Identity = 68/241 (28.22%), Postives = 118/241 (48.96%), Query Frame = 0 Query: 252 DHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLT---GSMSHADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQVIFTAEKSMIFPVVLPPSDVAFPVPIPPRH---LEEHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGGRLAA 487 ++ ++L V G+ I Y +T+ S W + +S FA +LGF LP+ +L LT G + A S+ ++V ++ +Y PAF GDT + I VR Y++ S L NQ+ + +F+ + +FP V P + P P H +E +++R S+ + + S R G LLLH RP+ S+++ ++ + TH H+N ++++ E+ I GG + A Sbjct: 27 EYGLDLDKVFVGKEIVSRYNITVDESVLSMWSGFMPTASYPESSREFAGRLGFHQIFLPYGFLLNLTLSLGVENFAHSSVLKVEMRDALYLNPAFPGDTFSCSIKITDVRPARIEGYTLIESSHLLFNQKGEAVFSVTRISLFPQVSPRKSIP-PERKEPYHNNRFKEQILARTRSIDM--ENVIFSFRAGDLLLHPYVRPIGKSENLFWATYLKNTHPSHYNYQRYQPGEIVISGGIVTA 264
BLAST of NO16G00090 vs. NCBI_GenBank
Match: WP_106151625.1 (hypothetical protein [Marinilabilia salmonicolor]) HSP 1 Score: 101.3 bits (251), Expect = 8.800e-18 Identity = 68/241 (28.22%), Postives = 118/241 (48.96%), Query Frame = 0 Query: 252 DHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLT---GSMSHADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQVIFTAEKSMIFPVVLPPSDVAFPVPIPPRH---LEEHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGGRLAA 487 ++ ++L V G+ I Y +T+ S W + +S FA +LGF LP+ +L LT G + A S+ ++V ++ +Y PAF GDT + I VR Y++ S L NQ+ + +F+ + +FP V P + P P H +E +++R S+ + + S R G LLLH RP+ S+++ ++ + TH H+N ++++ E+ I GG + A Sbjct: 12 EYGLDLDKVFVGKEIVSRYNITVDESVLSMWSGFMPTASYPESSREFAGRLGFHQIFLPYGFLLNLTLSLGVENFAHSSVLKVEMRDALYLNPAFPGDTFSCSIKITDVRPARIEGYTLIESSHLLFNQKGEAVFSVTRISLFPQVSPRKSIP-PERKEPYHNNRFKEQILARTRSIDM--ENVIFSFRAGDLLLHPYVRPIGKSENLFWATYLKNTHPSHYNYQRYQPGEIVISGGIVTA 249
BLAST of NO16G00090 vs. NCBI_GenBank
Match: WP_010528402.1 (hypothetical protein [Thermophagus xiamenensis] >SFE20822.1 Acyl dehydratase [Thermophagus xiamenensis]) HSP 1 Score: 100.9 bits (250), Expect = 1.200e-17 Identity = 68/240 (28.33%), Postives = 122/240 (50.83%), Query Frame = 0 Query: 252 DHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLT---GSMSHADSATVQVGFKNGIYHWPAFAGDTITKRFIIRSVRTVSSNKYSVFSFSCELKNQRDQVIFTAEKSMIFPVVLPPSDVAFPVPIPPRH--LEEHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGGRLAA 487 ++ ++L V G+ I Y +T+ S W + +S FA +LGF LP+S ++ LT G + A S+ +++ ++ IY PAF GDT + I +V S SV S L NQ+ + +F+ + +FP + P ++ IP ++ +E +++RA ++ + + L G L+LH RP+ S+++ S+ + TH H+N +++K E+ IPGG + A Sbjct: 12 EYGLDLEKVFIGKDIVSRYNITVDESVLSMWSGFMPTSSYPESSREFAGRLGFPQIFLPYSFLMNLTLSLGVENFAHSSVLKLALRDAIYLNPAFPGDTFSCSIKIINVYKSSRPGNSVIESSHLLFNQKGEPVFSLIRVSLFPEINPRKTISSEQKIPYQNNLFKEKILARARNISM--DNVMIRLEAGDLILHPYVRPIGKSENLFWSTYLKNTHPSHYNYQRYKPFEIIIPGGMVIA 249 The following BLAST results are available for this feature:
BLAST of NO16G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00090 ID=NO16G00090|Name=NO16G00090|organism=Nannochloropsis oceanica|type=gene|length=4864bpback to top protein sequence of NO16G00090.1 >NO16G00090.1-protein ID=NO16G00090.1-protein|Name=NO16G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=611bpback to top protein sequence of NO16G00090.2 >NO16G00090.2-protein ID=NO16G00090.2-protein|Name=NO16G00090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=648bpback to top protein sequence of NO16G00090.3 >NO16G00090.3-protein ID=NO16G00090.3-protein|Name=NO16G00090.3|organism=Nannochloropsis oceanica|type=polypeptide|length=490bpback to top protein sequence of NO16G00090.4 >NO16G00090.4-protein ID=NO16G00090.4-protein|Name=NO16G00090.4|organism=Nannochloropsis oceanica|type=polypeptide|length=490bpback to top Synonyms
Publications
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