NO16G00090.2, NO16G00090.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G00090.2
Unique Name	NO16G00090.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3144
Alignment location	chr16:29016..33879 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:29016..33879 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G00090.2 vs.
Match: EWM22823.1 (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 391.7 bits (1005), Expect = 4.300e-105
Identity = 194/222 (87.39%), Postives = 210/222 (94.59%), Query Frame = 0

Query:  426 MIFPVVLPPSDVAFPVPIPPRHLEEHLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTHERHFNTRKFKREEMYIPGGLVLGLTLSASARDLHEVLHEELVECSFVNHLHPWDIVSSFSYIKEMDENVTGDLEALTIRTIGVKNVDVHHDLLTRPFPLALFTTHSLRTKHVEALCQESMPELSKKIVCVVDRRILRQSPKTEAFLL 648
            MIFP+VLP S+V FPV +PPR LEEHLVSRADSLH LGSQSLQSLRPGQLLLHSLARPLS +QSMQLSSLGRLTHERHFNTRKFKR+EMYIPGGLVLGLTLSASARDLHEVLHEE++EC+F+NHLHPWDIVSSFSYIKEMDEN+TGDLEALT+RTIGVKNVDVH DLL + FPLALFTT SLRTKH+EALC+  +PELSKKIVCVV+RRILRQSPKTEAFLL
Sbjct:    1 MIFPIVLPASNVTFPVAVPPRLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQSMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQSPKTEAFLL 222

The following BLAST results are available for this feature:

BLAST of NO16G00090.2 vs.

BLAST of NO16G00090.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22823.1	4.300e-105	87.39	conserved unknown protein [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G00090	NO16G00090	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G00090.2	NO16G00090.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G00090.2.cds1	NO16G00090.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds2	NO16G00090.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds3	NO16G00090.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds4	NO16G00090.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds5	NO16G00090.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds6	NO16G00090.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds7	NO16G00090.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds8	NO16G00090.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds9	NO16G00090.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G00090.2.cds10	NO16G00090.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:29016..33879+
coding sequence from alignment at chr16:29016..33879+

mRNA sequence

>NO16G00090.2 ID=NO16G00090.2|Name=NO16G00090.2|organism=Nannochloropsis oceanica|type=mRNA|length=3144bp
CTCCAACAAGCCTGTGCCTTCCCCCCCCTTCCCTCCTCCTTCCTTCCCAA
TCGGTGGCAAGGCCACCCGACACCGAGGCAAAGTGGTAGGGGGGGAAGAG
AAGGATTGATGAGGAGGGAGATCTACCATCATCTCATGCTTCCTCCCTCC
CGCGTCCAACACACAGATGGAAAGCGTCATCCACCCTTCCTCCCCCCCTC
CTGGCCCCCGGGAAGAGGGGGAGGGCGAGATATCGTGGATGCAGTCCCAG
CCCAAGGCATCCAGCTCGCGAAGCAGCTGGGGATGGAGAAACATGAGAGA
GAGAGGGAAGGAGGAGGAACGGAAGGAGGGAGGAAGGAGAGTAGATAAGT
ATATTTCACTTAATTGAGACGCTTATGTTGCTTCTTCTTTTCTTTCGCCC
CCTGTTTTTTGTTTCTGTCTCTCCACTCGCTTTTTACCGTCTTACCTGTC
GGTATTGAGAAGGTGGTACCGTGCAGCTCCTACTACTACTCCTCTTTGTC
TCCCTCCCATCCGGACGGCCATCAGGGAGTGCGCGAGGCAGGGCGGGAGG
GCGAAAAGAAGAAGGGGGGGTGGAAAGCATGTCTTCTAACTCGGCGGAAA
AAGAGGCCACATCGCCGCATCTCTCTAAGCTGCGTTTGTAGTGTTTTGAC
GGAATGGCGTGAGGGATCCTGCTTTGCTTACTATGCCTTCCCTTCCTCCC
CTCTGTTCGATCTCGTAACAGCTCAGAGCCTCTTCTCATGAGTAGGCGCA
TTCAAGTACTTCGTCCGCTTTAATTCATAATCATTTGCCGCCATTTCTTT
CATCGTTACGCTTCGTTTCCCCTTACCGTGTGCGACTCAACCATCCGCCC
TGCTCCCACAGCGCACGCAGCCGAGCATCCCCTCGAAGGGACGATATCAA
GACACGCCCTCCCGGAGTCTCGCAGGAGAAGGCCAGTGGCAACTGATGTG
GCTATGTGTTCAGATAGGGAAAGAATTCGCGGTCAGTTCACACTTACCTC
GTTGGTTCAGTGTGACCGAGTCTGTCCTTTTCTAGGCTCCTGGCCTGTGT
GTTCTCACCATCCTGCCCAGCTTTTCAGACGTACTTACCCCTAGAGACAC
GAAGCCCTGGAACGCCATGAAATCCGGTGAGGCTGGAAGCAAAGAAAGAG
TCACCTTCTTAGTCCTACTGTTGCTGCTGCAGCTTGTGGTGGTGGTTGCA
GTGGCAAGGGAGGCGAGAAAGAAGGAAATCTCTTCCTCCTCCTCCTGTGG
CGAGGCTCCTGGCATTGGGATAAGTGGTGATGGCGGGGCTTCCATCCTTG
TACTCCCCCCTCCGACTTTCATGCCGCCGCCATCGCCCTGCCTGTGTCTT
GGTAGAGGAATGGTGTGGAATGGGAGCGTGGGTTGTCTGTTGCTGGCGTT
GTCACGTTGCGTGCGACCTTGCCGTCGCTCTTCCGCGATAATTCTTCTTC
AACCTCCTCTTTCACGCCTTCATCTTCATCATCCTCTACCTGCCAAATGC
AATACACGCCCCACGCATGACAGACTAGCCATGCTCGCCTTCCGGGGCGT
GGGTACCAAGCTTGGCCTTCATCGACTGCCTGTGTCTTCCACTCGGCCAG
TGCTTGTATCCCTCCCTTATCACGCCTCGCAGCAGCAGACACGAGGCGTC
ACCAAGTCAGGCAGAAGCAGCAAAGGCACTGAGACTAGCACCACCACCAA
CAGCAGCAACAGTGCCAACGGCACGTCTACTGCCACGAGGAAACGCAAGG
GTAGGGACGCAGGCCCGCCGATCAATGCTGCCTTCTTTAAAGTGGACGGC
GCCAATCCGCCTGCAGTAGAGGGAACCGGTACGGCCGAGGGCGATGGGTG
GGTCGTGGGAGAGGTGACGGACCATGCCATTAACCTGCACGACGTGCGCC
CGGGCGAAGTCATCGACATTCCGTATGAGCTGACCATCTCCCCGTCCTTC
CGCGACTTCTGGCAGAGCGTGTTCTACTCCCATGATAGGCTCAACACCTC
GACGCCATTTGCGCGCAAGCTGGGTTTCCAAGACCAGGTGCTGCCATTCT
CTCTCATGCTCTTCTTGACGGGCAGCATGAGCCACGCGGACTCGGCCACT
GTCCAGGTGGGCTTCAAGAATGGCATTTACCACTGGCCGGCCTTCGCGGG
TGATACCATCACGAAGCGTTTCATTATCCGTAGCGTGCGCACCGTCAGTA
GCAACAAATACAGGTGGGGCGTGGGGAAGGACGGACGACGAAAATCTATT
TCAGCCGCCCCTCCCTCCCTCCCTCACCTCCTTCCTTCCTCCCTCCTTTT
CGTTCCTCCCCCCGCCCAAACAAGCGTTTTCTCATTCTCCTGCGAGCTCA
AGAACCAACGCGACCAGGTCATCTTCACCGCGGAGAAGAGCATGATCTTC
CCCGTCGTCCTGCCGCCCTCGGACGTGGCCTTCCCCGTGCCCATTCCTCC
GCGACATCTGGAGGAGCACCTGGTCTCGCGCGCGGACAGCCTGCACATCC
TGGGCTCGCAGTCCCTGCAGTCGCTGCGGCCCGGCCAGCTCCTTCTTCAC
TCCCTCGCCCGGCCTCTGTCCGCGTCCCAGAGCATGCAGCTATCCTCCCT
GGGCCGGCTGACGCATGAGCGGCACTTTAACACCCGCAAGTTCAAGCGCG
AGGAGATGTACATACCAGGCGGTCTCGTCCTAGGCCTGACCCTCTCAGCC
TCTGCCAGGGACCTGCACGAGGTGCTGCATGAGGAGCTGGTGGAGTGCTC
CTTCGTCAACCACCTCCACCCGTGGGACATAGTTTCCTCCTTCTCCTATA
TCAAGGAGATGGACGAGAATGTCACTGGCGACCTCGAAGCCCTGACCATT
CGCACCATCGGCGTCAAAAACGTGGATGTGCACCACGACCTGCTGACCAG
GCCCTTTCCTCTCGCCCTCTTCACCACCCACTCCCTTCGGACCAAGCACG
TAGAGGCTCTCTGCCAGGAAAGCATGCCCGAGCTTAGCAAGAAAATTGTG
TGTGTGGTGGATCGACGCATCCTGCGCCAGAGCCCTAAGACGGAGGCTTT
CTTGTTGTGAAGTGGAGGGAGAGTAGGAGGATGAGGATTGTACAGAATGA
GGAATCTGCAGAGAAAATGGGAAAGCATTGTCAGACAAATTGAG

protein sequence of NO16G00090.2

>NO16G00090.2-protein ID=NO16G00090.2-protein|Name=NO16G00090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MKSGEAGSKERVTFLVLLLLLQLVVVVAVAREARKKEISSSSSCGEAPGI
GISGDGGASILVLPPPTFMPPPSPCLCLGRGMVWNGSVGCLLLALSRCVR
PCRRSSAIILLQPPLSRLHLHHPLPAKCNTRPTHDRLAMLAFRGVGTKLG
LHRLPVSSTRPVLVSLPYHASQQQTRGVTKSGRSSKGTETSTTTNSSNSA
NGTSTATRKRKGRDAGPPINAAFFKVDGANPPAVEGTGTAEGDGWVVGEV
TDHAINLHDVRPGEVIDIPYELTISPSFRDFWQSVFYSHDRLNTSTPFAR
KLGFQDQVLPFSLMLFLTGSMSHADSATVQVGFKNGIYHWPAFAGDTITK
RFIIRSVRTVSSNKYRWGVGKDGRRKSISAAPPSLPHLLPSSLLFVPPPA
QTSVFSFSCELKNQRDQVIFTAEKSMIFPVVLPPSDVAFPVPIPPRHLEE
HLVSRADSLHILGSQSLQSLRPGQLLLHSLARPLSASQSMQLSSLGRLTH
ERHFNTRKFKREEMYIPGGLVLGLTLSASARDLHEVLHEELVECSFVNHL
HPWDIVSSFSYIKEMDENVTGDLEALTIRTIGVKNVDVHHDLLTRPFPLA
LFTTHSLRTKHVEALCQESMPELSKKIVCVVDRRILRQSPKTEAFLL*

mRNA from alignment at chr16:29016..33879+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G00090.2 ID=NO16G00090.2|Name=NO16G00090.2|organism=Nannochloropsis oceanica|type=mRNA|length=4864bp|location=Sequence derived from alignment at chr16:29016..33879+ (Nannochloropsis oceanica)
CTCCAACAAGCCTGTGCCTTCCCCCCCCTTCCCTCCTCCTTCCTTCCCAA
TCGGTGGCAAGGCCACCCGACACCGAGGCAAAGTGGTAGGGGGGGAAGAG
AAGGATTGATGAGGAGGGAGATCTACCATCATCTCATGCTTCCTCCCTCC
CGCGTCCAACACACAGATGGAAAGCGTCATCCACCCTTCCTCCCCCCCTC
CTGGCCCCCGGGAAGAGGGGGAGGGCGAGATATCGTGGATGCAGTCCCAG
CCCAAGGCATCCAGCTCGCGAAGCAGCTGGGGATGGAGAAACATGAGAGA
GAGAGGGAAGGAGGAGGAACGGAAGGAGGGAGGAAGGAGAGTAGATAAGT
ATATTTCACTTAATTGAGACGCTTATGTTGCTTCTTCTTTTCTTTCGCCC
CCTGTTTTTTGTTTCTGTCTCTCCACTCGCTTTTTACCGTCTTACCTGTC
GGTATTGAGAAGGTGGTACCGTGCAGCTCCTACTACTACTCCTCTTTGTC
TCCCTCCCATCCGGACGGCCATCAGGGAGTGCGCGAGGCAGGGCGGGAGG
GCGAAAAGAAGAAGGGGGGGTGGAAAGCATGTCTTCTAACTCGGCGGAAA
AAGAGGCCACATCGCCGCATCTCTCTAAGCTGCGTTTGTAGTGTTTTGAC
GGAATGGCGTGAGGGATCCTGCTTTGCTTACTATGCCTTCCCTTCCTCCC
CTCTGTTCGATCTCGTAACAGCTCAGAGCCTCTTCTCATGAGTAGGCGCA
TTCAAGTACTTCGTCCGCTTTAATTCATAATCATTTGCCGCCATTTCTTT
CATCGTTACGCTTCGTTTCCCCTTACCGTGTGCGACTCAACCATCCGCCC
TGCTCCCACAGCGCACGCAGCCGAGCATCCCCTCGAAGGGACGATATCAA
GACACGCCCTCCCGGAGTCTCGCAGGAGAAGGCCAGTGGCAACTGATGTG
GCTATGTGTTCAGATAGGGAAAGAATTCGCGGTCAGTTCACACTTACCTC
GTTGGTTCAGTGTGACCGAGTCTGTCCTTTTCTAGGCTCCTGGCCTGTGT
GTTCTCACCATCCTGCCCAGCTTTTCAGACGTACTTACCCCTAGAGACAC
GAAGCCCTGGAACGCCATGAAATCCGGTGAGGCTGGAAGCAAAGAAAGAG
TCACCTTCTTAGTCCTACTGTTGCTGCTGCAGCTTGTGGTGGTGGTTGCA
GTGGCAAGGGAGGCGAGAAAGAAGGAAATCTCTTCCTCCTCCTCCTGTGG
CGAGGCTCCTGGCATTGGGATAAGTGGTGATGGCGGGGCTTCCATCCTTG
TACTCCCCCCTCCGACTTTCATGCCGCCGCCATCGCCCTGCCTGTGTCTT
GGTAGAGGAATGGTGTGGAATGGGAGCGTGGGTTGTCTGTTGCTGGCGTT
GTCACGTTGCGTGCGACCTTGCCGTCGCTCTTCCGCGATAATTCTTCTTC
AACCTCCTCTTTCACGCCTTCATCTTCATCATCCTCTACCTGCCAAATGC
AATACACGCCCCACGCATGACAGACTAGCCATGCTCGCCTTCCGGGGCGT
GGGTACCAAGCTTGGCCTTCATCGACTGCCTGTGTCTTCCACTCGGCCAG
TGCTTGTATCCCTCCCTTATCACGCCTCGCAGCAGCAGACACGAGGCGTC
ACCAAGTCAGGCAGAAGCAGCAAAGGCACTGAGACTAGCACCACCACCAA
CAGCAGCAACAGTGCCAACGGCACGTCTACTGCCACGAGGAAACGCAAGG
GTAGGGACGCAGGCCCGCCGATCAATGCTGCCTTCTTTAAAGTGGACGGC
GCCAATCCGCCTGCAGTAGAGGGAACCGGTACGGCCGAGGGCGATGGGTG
GGTCGTGGGAGAGGTGACGGACCATGCCATTAACCTGCACGACGTGCGCC
CGGTACGTAGATGCTTCAGGAAGGAAAGGAGGAAGGATCTGGATGGGTAG
ATACCTTTGGGCTAATTCGATTCTGGGCCTGTCTTTTTACTCGTCCCTCC
CTCCCTTGTTTTTGCACAACAGGGCGAAGTCATCGACATTCCGTATGAGC
TGACCATCTCCCCGTCCTTCCGCGACTTCTGGCAGAGCGTGTTCTACTCC
CATGATAGGCTCAACACCTCGACGCCATTTGCGCGCAAGGTGCGTGTGCA
GAGATAGAGAGGGAGAGGGAGAGACAGAGAAAGGAAGAGGAGACAAAGGA
GGAAGGCGAGGGACGAGAAGTCAGCAGATTATGCTTGTTGATTATGCTAA
TCCTCTTGTTCTCCTTGTTTTTTCACGCTCATATGGCAACAGCTGGGTTT
CCAAGACCAGGTGCTGCCATTCTCTCTCATGCTCTTCTTGACGGGCAGCA
TGAGCCACGCGGACTCGGCCACTGTCCAGGTAGGGGGAGGGCGGGAGAGA
GGGAGGGAGGAAGGGATGAAGGGAGGGAAGGATGAAGGGAGGGAGGGAGA
AGTGGAAGGATGGAGGGAGAGAGGAATGGAGGGAGGGAGGAATGGAGGAA
TGGAGGGAGGGAGGGAGGGAGGAAGGAATGGAGTAAGGGAGGAGAGAAGT
GAGGGGAAGAGGGAGGAAAAGATGGAGACAAGAAGGGCAAATAAAAGCGT
GACCGAAGACTTTACAAATAACAACAGGTGGGCTTCAAGAATGGCATTTA
CCACTGGCCGGCCTTCGCGGGTGAGAAGTGTCCTCCCTCCCTCCCTCCCT
CCCTCCCTCTCCTCCTCCTTCGCTCGCTTTGTCCCATTCTATCCCTTCCA
CCCTCTCTCCCCGTGTAGGTGATACCATCACGAAGCGTTTCATTATCCGT
AGCGTGCGCACCGTCAGTAGCAACAAATACAGGTGGGGCGTGGGGAAGGA
CGGACGACGAAAATCTATTTCAGCCGCCCCTCCCTCCCTCCCTCACCTCC
TTCCTTCCTCCCTCCTTTTCGTTCCTCCCCCCGCCCAAACAAGCGTTTTC
TCATTCTCCTGCGAGCTCAAGAACCAACGCGACCAGGTCATCTTCACCGC
GGAGAAGAGCATGATCTTCCCCGTCGTCCTGCCGCCCTCGGACGTGGCCT
TCCCCGTGCCCATTCCTCCGCGACATCTGGAGGAGCACCTGGTCTCGCGC
GCGGACAGGTAGGGACGGAGGGATGGAGGGGGCGTGGTGTTGCGGCCTGT
GGTGGCATCGGTCATTCCCCCCACTCGGCCTCCCCTCCTTGCGTGCTGAC
AGGGCAGGATAGAGGGAGGGGAAGGGGGGGGGGAAAGGCGGGATACCGAA
TCATGAATGGCAAGCTCGTGATACAGACTCCGTCTCGTCTTTCTCCTTTT
TCCCCGCCCTCCCACCCATTCCCAGCCTGCACATCCTGGGCTCGCAGTCC
CTGCAGTCGCTGCGGCCCGGCCAGCTCCTTCTTCACTCCCTCGCCCGGCC
TCTGTCCGCGTCCCAGGTAGAAGGAGGGAGGGAGGGAGGGCGGGAGGGAG
GGAGGGAGGGCAATGTGGGAGGGGGAACCAAGACGCTGCGGCCACTCTCC
TTCGTCTTCTGTTTCGACTTCGCGATTCTGCTCATCCTGCTCACACGCTT
ACCCCACATTCTGACGTGCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCT
CCTCCTCTCCCCCCTTCCTCAGAGCATGCAGCTATCCTCCCTGGGCCGGC
TGACGCATGAGCGGCACTTTAACACCCGCAAGTTCAAGCGCGAGGAGATG
TACATACCAGGTGGGAGATTGGCAGCAAGGAGGGAATGAGGAGGGAGGGA
GGGAGGGAAGGAGGGTGGAGAATGAGGATATACGCTGGCAAAGAGTGCAA
GGGGTCGGCAATTTTCCTTACGAGCCCCCTCTTTCCCCCTTCTCTCTCTC
CCTTTCTCTACCTTCCCACCTGCTCCTTATCTGGCGTTCCTTCCTCCTCT
CTTTCGTCTCATCCCTTATATTGGTACATGCCGCCTTCCTCCCTCCTTCC
TTCCCGCCCTTCCCCAGGCGGTCTCGTCCTAGGCCTGACCCTCTCAGCCT
CTGCCAGGGACCTGCACGAGGTGCTGCATGAGGAGCTGGTGGAGTGCTCC
TTCGTCAACCACCTCCACCCGTGGGGTGAGGACGGAGGGAGAGAGGAGGG
GGGGGAGGGGGGGAAGGAGAGCAAGGCGGGAGAAGGGGTGATTAATTGAC
CTTCCTCCACTTATGTTCGCCCTTGAAGTGCGAGGAGAGAGATGGAGGGG
AAGAGCGGGAAAAGGGCCGATTCCATCACGGATTCAGTTGGAATAGCAAA
TCGCACCTACTGTCTCTTTTTGTCCGTACAGCGGAACGAACGACTCTGTC
TGTCGTTCTCCCGTGACTTCCGGTTGTTCTGATCGTCACTCATTCTCTTC
ATCTCCCCATACACAGACATAGTTTCCTCCTTCTCCTATATCAAGGAGAT
GGACGAGAATGTCACTGGCGACCTCGAAGGTAGGGGGGGAAGGGGGGAAG
GGAGGGGGAAAGGGCAGGGAGGAAGGAAGGGCCGTTGGAGTACACCCTTC
TCTCAAATTTATACCTCACCTCCTCCCTTCTGTCTCCCCTTCCTTCTCCC
CACTCGCAGCCCTGACCATTCGCACCATCGGCGTCAAAAACGTGGATGTG
CACCACGACCTGCTGACCAGGCCCTTTCCTCTCGCCCTCTTCACCACCCA
CTCCCTTCGGACCAAGCACGTAGAGGCTCTCTGCCAGGAAAGCATGCCCG
AGCTTAGCAAGAAAATTGTGTGTGTGGTGGATCGACGCATCCTGCGCCAG
AGCCCTAAGACGGAGGCTTTCTTGTTGTGAAGTGGAGGGAGAGTAGGAGG
ATGAGGATTGTACAGAATGAGGAATCTGCAGAGAAAATGGGAAAGCATTG
TCAGACAAATTGAG

Coding sequence (CDS) from alignment at chr16:29016..33879+

>NO16G00090.2 ID=NO16G00090.2|Name=NO16G00090.2|organism=Nannochloropsis oceanica|type=CDS|length=1944bp|location=Sequence derived from alignment at chr16:29016..33879+ (Nannochloropsis oceanica)
ATGAAATCCGGTGAGGCTGGAAGCAAAGAAAGAGTCACCTTCTTAGTCCT
ACTGTTGCTGCTGCAGCTTGTGGTGGTGGTTGCAGTGGCAAGGGAGGCGA
GAAAGAAGGAAATCTCTTCCTCCTCCTCCTGTGGCGAGGCTCCTGGCATT
GGGATAAGTGGTGATGGCGGGGCTTCCATCCTTGTACTCCCCCCTCCGAC
TTTCATGCCGCCGCCATCGCCCTGCCTGTGTCTTGGTAGAGGAATGGTGT
GGAATGGGAGCGTGGGTTGTCTGTTGCTGGCGTTGTCACGTTGCGTGCGA
CCTTGCCGTCGCTCTTCCGCGATAATTCTTCTTCAACCTCCTCTTTCACG
CCTTCATCTTCATCATCCTCTACCTGCCAAATGCAATACACGCCCCACGC
ATGACAGACTAGCCATGCTCGCCTTCCGGGGCGTGGGTACCAAGCTTGGC
CTTCATCGACTGCCTGTGTCTTCCACTCGGCCAGTGCTTGTATCCCTCCC
TTATCACGCCTCGCAGCAGCAGACACGAGGCGTCACCAAGTCAGGCAGAA
GCAGCAAAGGCACTGAGACTAGCACCACCACCAACAGCAGCAACAGTGCC
AACGGCACGTCTACTGCCACGAGGAAACGCAAGGGTAGGGACGCAGGCCC
GCCGATCAATGCTGCCTTCTTTAAAGTGGACGGCGCCAATCCGCCTGCAG
TAGAGGGAACCGGTACGGCCGAGGGCGATGGGTGGGTCGTGGGAGAGGTG
ACGGACCATGCCATTAACCTGCACGACGTGCGCCCGGGCGAAGTCATCGA
CATTCCGTATGAGCTGACCATCTCCCCGTCCTTCCGCGACTTCTGGCAGA
GCGTGTTCTACTCCCATGATAGGCTCAACACCTCGACGCCATTTGCGCGC
AAGCTGGGTTTCCAAGACCAGGTGCTGCCATTCTCTCTCATGCTCTTCTT
GACGGGCAGCATGAGCCACGCGGACTCGGCCACTGTCCAGGTGGGCTTCA
AGAATGGCATTTACCACTGGCCGGCCTTCGCGGGTGATACCATCACGAAG
CGTTTCATTATCCGTAGCGTGCGCACCGTCAGTAGCAACAAATACAGGTG
GGGCGTGGGGAAGGACGGACGACGAAAATCTATTTCAGCCGCCCCTCCCT
CCCTCCCTCACCTCCTTCCTTCCTCCCTCCTTTTCGTTCCTCCCCCCGCC
CAAACAAGCGTTTTCTCATTCTCCTGCGAGCTCAAGAACCAACGCGACCA
GGTCATCTTCACCGCGGAGAAGAGCATGATCTTCCCCGTCGTCCTGCCGC
CCTCGGACGTGGCCTTCCCCGTGCCCATTCCTCCGCGACATCTGGAGGAG
CACCTGGTCTCGCGCGCGGACAGCCTGCACATCCTGGGCTCGCAGTCCCT
GCAGTCGCTGCGGCCCGGCCAGCTCCTTCTTCACTCCCTCGCCCGGCCTC
TGTCCGCGTCCCAGAGCATGCAGCTATCCTCCCTGGGCCGGCTGACGCAT
GAGCGGCACTTTAACACCCGCAAGTTCAAGCGCGAGGAGATGTACATACC
AGGCGGTCTCGTCCTAGGCCTGACCCTCTCAGCCTCTGCCAGGGACCTGC
ACGAGGTGCTGCATGAGGAGCTGGTGGAGTGCTCCTTCGTCAACCACCTC
CACCCGTGGGACATAGTTTCCTCCTTCTCCTATATCAAGGAGATGGACGA
GAATGTCACTGGCGACCTCGAAGCCCTGACCATTCGCACCATCGGCGTCA
AAAACGTGGATGTGCACCACGACCTGCTGACCAGGCCCTTTCCTCTCGCC
CTCTTCACCACCCACTCCCTTCGGACCAAGCACGTAGAGGCTCTCTGCCA
GGAAAGCATGCCCGAGCTTAGCAAGAAAATTGTGTGTGTGGTGGATCGAC
GCATCCTGCGCCAGAGCCCTAAGACGGAGGCTTTCTTGTTGTGA

Synonyms

Publications