NO15G03080, NO15G03080 (gene) Nannochloropsis oceanica

Overview
NameNO15G03080
Unique NameNO15G03080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3984
Alignment locationchr15:845408..849391 +

Link to JBrowse

Properties
Property NameValue
DescriptionRab GDP dissociation inhibitor
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:845408..849391 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005092GDP-dissociation inhibitor activity
GO:0005093Rab GDP-dissociation inhibitor activity
GO:0030234enzyme regulator activity
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO:0015031protein transport
GO:0007165signal transduction
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR018203GDP_dissociation_inhibitor
IPR000806RabGDI
Homology
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: OQS00988.1 (rab GDP dissociation inhibitor alpha [Achlya hypogyna])

HSP 1 Score: 646.4 bits (1666), Expect = 7.500e-182
Identity = 316/460 (68.70%), Postives = 375/460 (81.52%), Query Frame = 0 
Query:   40 EAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            EA  D  WLP G + LADG YDAIV+GTGLKECIISGLL+  G KVLH+DRN YYGGDCASLNLTNLYAKFR     EP A LGSNRDYN+DL+PKFIMACG LVK+LLHTKVTRYL+FKNVDGSYV++ GKIYKVPAT +EAL +SL+G+FEKRRFR+ L Y+  Y+E+DP+TF G DL    M  LY K+G+D  T++FTGH MAL  DD YL+RPA+E V+AI++Y YSLERYGKSPY+YPIYGLGGLPEGFSRLCAI+GGTFML  SVDEIL   +G A GIR G+EVAK K +IGDPSYFP  + +VTG+VVRSI ++ HP+ NT+NSES QIIIPA++  R  D+Y+ VVS AH VAA+  +IAI STTVETANPL EL+  V LLG Y++RFD+V +   P+ DG  DNC+ISSSYDATSHFETT++DVLSLYQRITG+ LD+ I+AD+TDAD
Sbjct:    4 EAKLDFEWLPAGTEALADGEYDAIVLGTGLKECIISGLLATKGQKVLHLDRNDYYGGDCASLNLTNLYAKFR--NGAEPIAGLGSNRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLDFKNVDGSYVYKGGKIYKVPATGEEALKSSLMGIFEKRRFRSMLMYIYNYEEEDPSTFDGMDLKVQPMSDLYAKFGVDANTQSFTGHTMALMRDDEYLNRPAIEAVRAIKMYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLHRSVDEIL-EKDGKAWGIRCGNEVAKGKIIIGDPSYFPASKTRVTGKVVRSIFILRHPINNTANSESCQIIIPAAQANRRSDIYVCVVSFAHCVAAKDTYIAIVSTTVETANPLAELDIGVSLLGEYVDRFDAVSDQLEPIGDGLNDNCFISSSYDATSHFETTSDDVLSLYQRITGEALDMNINADSTDAD 460
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: XP_008869157.1 (hypothetical protein H310_06034 [Aphanomyces invadans] >ETW02552.1 hypothetical protein H310_06034 [Aphanomyces invadans])

HSP 1 Score: 642.1 bits (1655), Expect = 1.400e-180
Identity = 309/460 (67.17%), Postives = 378/460 (82.17%), Query Frame = 0 
Query:   40 EAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            E+  +  WLP G + LADG YDAIV+GTGLKECI+SGL++  GLKVLH+DRN YYGGDCASLNL+NLY KFR E + EP A LGSNRDYN+DL+PKFIMACG LVKILLHTKVTRYLEFKNVDGSYV++  +IYKVPAT +EAL +SL+G+FEKRRFR  + Y+  Y+E++P+T  G DL +  M  +Y K+G+D  T++FTGHAMAL  DD Y++RPA+ETV+AI++Y YSLERYGKSPYIYPIYGLGGLPEGFSRLCAI+GGTFML+  VDE+L    G A GIR G+EVAK K +IGDPSYFPK++ +  G+VVRSI ++ HPVANT+NSES QIIIPA++  R +DVY+ VVS AH VAA+  +IAI STTVET+ PL E+E  V LLG Y++RFD V +   P+  G+ DNCYISSSYDATSHFETT++DVLSLYQRITG++LD+TI+ADTT+AD
Sbjct:    4 ESKQEFDWLPSGTEALADGEYDAIVLGTGLKECILSGLMATKGLKVLHLDRNNYYGGDCASLNLSNLYTKFRGENA-EPLAGLGSNRDYNIDLIPKFIMACGKLVKILLHTKVTRYLEFKNVDGSYVYKGSRIYKVPATGEEALSSSLMGIFEKRRFRGLIMYIYNYEEENPDTHQGLDLFKQPMSDVYAKFGVDANTQSFTGHAMALMRDDNYINRPAIETVRAIKMYTYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEVL-IENGKAWGIRSGNEVAKGKLIIGDPSYFPKEKTRSVGKVVRSIFILRHPVANTNNSESCQIIIPAAQANRRNDVYVCVVSFAHCVAAKDTYIAIVSTTVETSTPLAEIEIGVSLLGEYVDRFDEVSDQLEPVGTGASDNCYISSSYDATSHFETTSDDVLSLYQRITGEQLDMTINADTTEAD 461
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: XP_008617569.1 (acetyltransferase [Saprolegnia diclina VS20] >EQC28930.1 acetyltransferase [Saprolegnia diclina VS20])

HSP 1 Score: 641.7 bits (1654), Expect = 1.900e-180
Identity = 309/456 (67.76%), Postives = 372/456 (81.58%), Query Frame = 0 
Query:   44 DMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            D +WLP G + LADG YDAIV+GTGLKECI+SGLL+  G KVLHIDRN YYGGDCASLNLTNLY KFR     EP   LGSNRDYN+DL+PKFIMACG LVK+LLHTKVTRYL+FKNVDGSYV++ GKIYKVPAT +EAL +SL+G+FEKRRFR+ L Y+  Y+E DP+TF G DL    M  LY K+G+D  T++FTGH MAL  DD YL +PA+E V+AI++Y YSLERYGKSPY+YPIYGLGGLPEGFSRLCAI+GGTFML  SVDE+L   +G A GIR G+EVAK K +IGDPSYFP ++ + TG+VVRSI ++ HP+ NT+NSES QIIIPA++  RH D+Y+ VVS AH VAA+  +IAI STTVET+NPL ELE  + LLG Y++RFDSV +   P+ DG  DNC+IS+SYDATSHFETT++DVLSLY+RITG+ELD+ I+AD+TDAD
Sbjct:    9 DFAWLPAGTEALADGEYDAIVLGTGLKECILSGLLATKGQKVLHIDRNDYYGGDCASLNLTNLYGKFR--NGAEPLTGLGSNRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLDFKNVDGSYVYKGGKIYKVPATGEEALKSSLMGIFEKRRFRSMLMYIYNYEEDDPSTFDGLDLKTQPMSDLYAKFGVDANTQSFTGHTMALMRDDEYLRQPAIEAVRAIKMYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLHRSVDEVL-IEDGKAWGIRCGNEVAKGKIIIGDPSYFPAEKTRTTGQVVRSIFILRHPINNTANSESCQIIIPAAQANRHSDIYVCVVSFAHCVAAKDTYIAIVSTTVETSNPLAELELGISLLGEYVDRFDSVSDQLEPIGDGKADNCFISASYDATSHFETTSDDVLSLYKRITGEELDMNINADSTDAD 461
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: XP_012205099.1 (hypothetical protein SPRG_10582 [Saprolegnia parasitica CBS 223.65] >KDO24155.1 hypothetical protein SPRG_10582 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 641.0 bits (1652), Expect = 3.200e-180
Identity = 311/456 (68.20%), Postives = 372/456 (81.58%), Query Frame = 0 
Query:   44 DMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            D +WLP G + LADG YDAIV+GTGLKECI+SGLL+  G KVLHIDRN YYGGDCASLNLTNLY KFR     EP A LGSNRDYN+DL+PKFIMACG LVK+LLHTKVTRYL+FKNVDGSYV++ GKIYKVPAT +EAL +SL+G+FEKRRFR+ L Y+  Y+E DP+TF G DL    M  LY K+G+D  T++FTGH MAL  DD YL +PA+E V+AI++Y YSLERYGKSPY+YPIYGLGGLPEGFSRLCAI+GGTFML  SVDE+L   +G A GIR G+EVAK K +IGDPSYFP ++ + TG+VVRSI ++ HPV NT+NSES QIIIPA++  R  D+Y+ VVS AH VAA+  +IAI STTVET+NPL ELE  V LLG Y++RFDSV +   P+ DG  DNC+IS+SYDATSHFETT++DVLSLY+RITG+ELD+ I+AD+TDAD
Sbjct:    9 DFAWLPAGTEALADGEYDAIVLGTGLKECILSGLLATKGQKVLHIDRNDYYGGDCASLNLTNLYGKFR--NGAEPLAGLGSNRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLDFKNVDGSYVYKGGKIYKVPATGEEALKSSLMGIFEKRRFRSMLMYIYNYEEDDPSTFDGLDLKTQPMSDLYAKFGVDANTQSFTGHTMALMRDDEYLRQPAIEAVRAIKMYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLHRSVDEVL-IEDGKAWGIRCGNEVAKGKIIIGDPSYFPAEKTRTTGQVVRSIFILRHPVNNTANSESCQIIIPAAQANRRSDIYVCVVSFAHCVAAKDTYIAIVSTTVETSNPLAELELGVSLLGEYVDRFDSVSDQLEPIGDGKADNCFISASYDATSHFETTSDDVLSLYKRITGEELDMNINADSTDAD 461
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: CCI39957.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 639.8 bits (1649), Expect = 7.000e-180
Identity = 301/462 (65.15%), Postives = 380/462 (82.25%), Query Frame = 0 
Query:   39 EEAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDADY 501
            EE      WLP G + LADG YDAIV+GTGLKECI+SGLL+V G KVLH+DRN+YYGGDCASLNL NLY K++P G++ PS  LGS+RDYN+DL+PKFIMACG LVK+LLHTKVTRYLEFKNVDGSYV + GK YKVPAT +EAL +SL+G+FEKR+FR  + Y+  Y+E DP TF G DL +  M  +Y+K+G+D  T++F GHAMAL  DD YL +PA+ET++AI+LY YSLERYGKSPY+YPIYGLGGLPEGFSRLCAI+GGTFML+  VDEILY   G A GI+ G+EVAK K LIGDPSYF  +++ +TG+ VRSI ++DHP+ NT+++ES QIIIPA++  R +D+Y+ +VS AHM+AA+G ++AI ST  ETA+PL E+ P V LLG +++RFDSV + + P++DGS DNCYIS+SYD TSHFETT+EDVLS+Y+RITG+ELD++I+ADTTDAD+
Sbjct:    3 EEEKLSFDWLPDGCESLADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNSYYGGDCASLNLANLYEKYKP-GTKPPS-ELGSSRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKNGKSYKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDDPKTFEGLDLKKQPMSQVYEKFGVDANTQSFMGHAMALWTDDRYLGKPAIETIRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDATGRAWGIKCGNEVAKGKLLIGDPSYFDNEKMTLTGKAVRSIFILDHPIPNTNDAESLQIIIPAAQANRQNDIYVCMVSYAHMIAAKGMYVAIVSTVAETADPLSEIAPGVSLLGPFLDRFDSVSDMYEPIQDGSNDNCYISASYDPTSHFETTSEDVLSMYKRITGEELDMSINADTTDADH 462
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: XP_009826751.1 (hypothetical protein H257_04074 [Aphanomyces astaci] >ETV83321.1 hypothetical protein H257_04074 [Aphanomyces astaci])

HSP 1 Score: 639.0 bits (1647), Expect = 1.200e-179
Identity = 306/460 (66.52%), Postives = 381/460 (82.83%), Query Frame = 0 
Query:   40 EAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            E+  D  WLP G + LADG Y+AIV+GTGLKECI+SGL++  GLKVLH+DRN YYGGDCASLNL+NLY KFR E + EP   LGSNRDYN+DL+PKFIMACG LVKILLHTKVTRYLEFKNVDGSYV++  +IYKVPAT +EAL +SL+G+FEKRRFR  + ++  Y+E++P+T  G DL +  M  +Y K+G+D  T++FTGHAMAL  DD Y++RPA+ETV+A+++Y YSLERYGKSPYIYPIYGLGGLPEGFSRLCAI+GGTFML+  VDE+L+  +G A GIR G+EVAK K +IGDPSYFPK++ +  G+VVRSI ++ HP+ANT+NSES QIIIPA++  R +DVY+ VVS AH VAA+  +IAI STTVET++PL ELE  V LLG Y++RFD V +   P+ +G+ DNCYISSSYDATSHFETT++DVLSLYQRITG++LD+TI+ADTT+AD
Sbjct:    4 ESKNDFDWLPAGTEALADGEYEAIVLGTGLKECILSGLMATKGLKVLHLDRNNYYGGDCASLNLSNLYTKFRGEHA-EPLTGLGSNRDYNIDLIPKFIMACGKLVKILLHTKVTRYLEFKNVDGSYVYKGSRIYKVPATGEEALSSSLMGIFEKRRFRGLIMFVYNYEEENPDTHQGLDLFKQPMSDVYAKFGVDANTQSFTGHAMALMRDDNYINRPAIETVRALKMYSYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEVLF-KDGKAWGIRSGNEVAKGKLIIGDPSYFPKEKTRSVGKVVRSIFILRHPIANTNNSESCQIIIPAAQANRRNDVYVCVVSFAHCVAAKDTYIAIVSTTVETSSPLAELEIGVSLLGEYVDRFDEVSDQLEPVGNGTVDNCYISSSYDATSHFETTSDDVLSLYQRITGEQLDMTINADTTEAD 461
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: OQR97204.1 (rab GDP dissociation inhibitor alpha [Thraustotheca clavata])

HSP 1 Score: 635.2 bits (1637), Expect = 1.700e-178
Identity = 306/460 (66.52%), Postives = 374/460 (81.30%), Query Frame = 0 
Query:   40 EAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            EA  D +WLP G + LADG YDAIV+GTGLKECI+SGLL+  G KVLH+DRN YYGGDCASLNLTNLY KF   G  +P   LGSNRDYN+DL+PKFIMACG LVK+LLHTKVTRYL+FKNVDGSYV++ GKIYK+PAT  EAL TSL+G+FEKRRFR+ L Y+  Y+E DP+T+ G DL    M  LY K+G+D  T++FTGH MAL  DD YL+RPA++ V+AI++Y YSLERYGKSPY+YPIYGLGGLPEGFSRLCAI+GGTFML  SVD+IL+   G A GIR G+EVAK   +IGDPSYFP+++ +VTG+V+RSI ++ HP+ NT++SES QIIIPA++ KR  D+Y+ VVS AH VAA   +IAI STTVETANPL E+E  V LLG Y++RFDSV +   P  DG++DNC+IS+SYDATSHFETT++DVL+LYQRITG+ LD+ I+AD+TDAD
Sbjct:    4 EAKLDFAWLPAGTEALADGEYDAIVLGTGLKECILSGLLATKGKKVLHLDRNDYYGGDCASLNLTNLYTKF---GKGDPLPGLGSNRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLDFKNVDGSYVYKGGKIYKIPATSAEALNTSLMGIFEKRRFRSMLMYIYNYEEDDPSTYDGMDLKTQPMSDLYSKFGVDANTQSFTGHTMALMRDDEYLNRPAIDAVRAIKMYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLHRSVDDILF-ENGKAWGIRCGNEVAKGDIIIGDPSYFPREKSRVTGQVIRSIFILRHPINNTADSESCQIIIPAAQAKRKSDIYVCVVSFAHNVAAANTYIAIVSTTVETANPLTEIEIGVNLLGEYVDRFDSVSDQMEPEADGTQDNCFISASYDATSHFETTSDDVLNLYQRITGEALDMNINADSTDAD 459
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: CCA14701.1 (rab GDP dissociation inhibitor alpha putative [Albugo laibachii Nc14])

HSP 1 Score: 632.1 bits (1629), Expect = 1.500e-177
Identity = 298/461 (64.64%), Postives = 377/461 (81.78%), Query Frame = 0 
Query:   39 EEAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            +E      WLP G + LADG YDAIV+GTGLKECI+SGLL+V G KVLH+DRN+YYGGDCASLNL NLY K++P G++ PS  LGS+RDYN+DL+PKFIMACG LVK+LLHTKVTRYLEFKNVDGSYV + GK YKVPAT +EAL +SL+G+FEKR+FR  + Y+  Y+E +P TF G DL +  M  +++K+G+D  T++F GHAMAL  DD YL++PA+ET+KAI+LY YSLERYGKSPY+YPIYGLGGLPEGFSRLCAI+GGTFML+  VDEILY   G A GI+  +EVAK K LIGDPSYF  +++ +TG+ VRSI ++DHP+ NT+++ES QIIIPA++  R +D+Y+ +VS AHM+AA+G ++AI ST  ETA+PL E+ P V LLG + +RFDSV + + P+ DGS DNCYIS+SYD TSHFETT+EDVLS+Y+RITG+ELD++I+ADTTDAD
Sbjct:    3 QEKKLSFDWLPEGCESLADGEYDAIVLGTGLKECILSGLLAVNGKKVLHLDRNSYYGGDCASLNLANLYEKYKP-GTKPPS-ELGSSRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKNGKSYKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDNPKTFEGLDLKKQPMSQVFEKFGVDANTQSFMGHAMALWTDDRYLEKPAIETIKAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDDTGRAWGIKCDNEVAKGKLLIGDPSYFSSEKMTLTGKAVRSIFILDHPIPNTNDAESLQIIIPAAQANRQNDIYVCMVSYAHMIAAKGMYVAIVSTVAETADPLSEIAPGVNLLGPFFDRFDSVSDMYEPIHDGSTDNCYISASYDPTSHFETTSEDVLSMYKRITGEELDMSINADTTDAD 461
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: XP_008895595.1 (hypothetical protein PPTG_04978 [Phytophthora parasitica INRA-310] >ETK78463.1 hypothetical protein L915_15518 [Phytophthora parasitica] >ETL31894.1 hypothetical protein L916_15416 [Phytophthora parasitica] >ETL85123.1 hypothetical protein L917_15240 [Phytophthora parasitica] >ETN19776.1 hypothetical protein PPTG_04978 [Phytophthora parasitica INRA-310] >ETO67054.1 hypothetical protein F444_15950 [Phytophthora parasitica P1976] >ETP08128.1 hypothetical protein F441_15807 [Phytophthora parasitica CJ01A1] >ETP36189.1 hypothetical protein F442_15815 [Phytophthora parasitica P10297] >KUF79248.1 secretory pathway GDP dissociation inhibitor 1 [Phytophthora nicotianae] >KUF94155.1 hypothetical protein AM588_10005811 [Phytophthora nicotianae] >KUG00314.1 secretory pathway GDP dissociation inhibitor 1 [Phytophthora nicotianae])

HSP 1 Score: 630.6 bits (1625), Expect = 4.300e-177
Identity = 303/461 (65.73%), Postives = 377/461 (81.78%), Query Frame = 0 
Query:   39 EEAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            EE+  D +WLP G + LADG YD IV+GTGLKECI+SGLL+V G KVL +DRN YYGG+CAS NLTNLY KF+P+  +EP   LG++RDYNVDLVPKFIMACG LVK+LLHTKVTRYLEFKNVDGSYV + G+ YKVPAT +EAL +SL+G+FEKR+FR  + Y+  Y+E DP T+ G DL +  M  L++KYG+D  T++F GHAMAL  D++Y +RPA+ETV+AI+LY YSLERYGKSPYIYP+YGLGGLPE FSRLCAINGGTFML+  VDEIL   +G A GI+  +EVAKAK +IGDPSYFP+ +V+ TG  VRSI +++HPV NT+++ES QIIIPA++  R++D+Y+AVVSSAH VA QG +IAI ST  ET+ PLQELEP V+LLG Y+ERFD++ + F P+ DG +DNC+ISSSYD TSHFETT+EDVL LY+RITG++LD+ I+ADTTD D
Sbjct:    3 EESKLDFAWLPQGTEALADGEYDVIVLGTGLKECILSGLLAVNGKKVLVVDRNPYYGGECASPNLTNLYKKFKPD--QEPRTDLGADRDYNVDLVPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKGGRTYKVPATGEEALRSSLMGMFEKRKFRKLIMYIYNYEEDDPKTYEGMDLFKQPMSELFEKYGVDANTQSFMGHAMALMRDESYHNRPAIETVRAIKLYAYSLERYGKSPYIYPLYGLGGLPESFSRLCAINGGTFMLNRGVDEILTDKDGKAWGIKCDNEVAKAKLVIGDPSYFPEQKVRKTGVAVRSIFILNHPVPNTNDAESLQIIIPAAQANRNNDIYVAVVSSAHCVAPQGIYIAIVSTLAETSVPLQELEPGVKLLGPYMERFDAITDMFEPVSDGKEDNCFISSSYDPTSHFETTSEDVLDLYKRITGEDLDMNINADTTDVD 461
[Close]
BLAST of NO15G03080 vs. NCBI_GenBank
Match: XP_009516088.1 (hypothetical protein PHYSODRAFT_284351 [Phytophthora sojae] >EGZ28813.1 hypothetical protein PHYSODRAFT_284351 [Phytophthora sojae])

HSP 1 Score: 628.6 bits (1620), Expect = 1.600e-176
Identity = 301/461 (65.29%), Postives = 373/461 (80.91%), Query Frame = 0 
Query:   39 EEAGPDMSWLPPGKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCASLNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHTKVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFLSYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLDDTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVKVTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHMVAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLEDGSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDAD 500
            EE+ PD +WLP G + LADG YD IV+GTGLKECI+SGLL+V G KVL +DRN YYGG+CAS NLTNLY KF+P+  ++P   LG++RDYNVDLVPKFIMACG LVK+LLHTKVTRYLEFKNVDGSYV + G+ YKVPAT +EAL +SL+G+FEKR+FR  + Y+  Y+E DP T+ G DL    M  L++KYG+D  T++F GHAMAL  D++Y  RPA+ETV+AI+LY YSLERYGKSPYIYP+YGLGGLPE FSRLCAINGGTFML+  VDEIL   +G A G++  +EVAKAK +IGDPSYFP  +V+ TG  VRSI ++DHPV NT+++ES QIIIPA++  R +D+Y+AVVSSAH VA QG +IAI ST  ET+ PLQELEP V+LLG Y+ERFD++ + F P+ DG +DNC+IS+SYD TSHFETT+EDVL LY+RITG +LD+ I+AD+TD D
Sbjct:    3 EESKPDFAWLPQGTEALADGEYDVIVLGTGLKECILSGLLAVNGKKVLIVDRNPYYGGECASPNLTNLYKKFKPD--QQPRTDLGADRDYNVDLVPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKGGRTYKVPATGEEALRSSLMGMFEKRKFRKLIMYIYNYEEDDPKTYEGMDLFTQPMSELFEKYGVDANTQSFMGHAMALMRDESYHKRPAIETVRAIKLYAYSLERYGKSPYIYPLYGLGGLPESFSRLCAINGGTFMLNRGVDEILTDKDGKAWGVKCDNEVAKAKLVIGDPSYFPAQKVRKTGVAVRSIFILDHPVPNTNDAESLQIIIPAAQANRQNDIYVAVVSSAHCVAPQGIYIAIVSTLAETSVPLQELEPGVKLLGPYLERFDAITDMFEPVSDGKEDNCFISASYDPTSHFETTSEDVLDLYKRITGDDLDMNINADSTDVD 461
The following BLAST results are available for this feature:
BLAST of NO15G03080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQS00988.17.500e-18268.70rab GDP dissociation inhibitor alpha [Achlya hypog... [more]
XP_008869157.11.400e-18067.17hypothetical protein H310_06034 [Aphanomyces invad... [more]
XP_008617569.11.900e-18067.76acetyltransferase [Saprolegnia diclina VS20] >EQC2... [more]
XP_012205099.13.200e-18068.20hypothetical protein SPRG_10582 [Saprolegnia paras... [more]
CCI39957.17.000e-18065.15unnamed protein product [Albugo candida][more]
XP_009826751.11.200e-17966.52hypothetical protein H257_04074 [Aphanomyces astac... [more]
OQR97204.11.700e-17866.52rab GDP dissociation inhibitor alpha [Thraustothec... [more]
CCA14701.11.500e-17764.64rab GDP dissociation inhibitor alpha putative [Alb... [more]
XP_008895595.14.300e-17765.73hypothetical protein PPTG_04978 [Phytophthora para... [more]
XP_009516088.11.600e-17665.29hypothetical protein PHYSODRAFT_284351 [Phytophtho... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL146nonsL146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001269NSK001269Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G03080.1NO15G03080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|445312gene_4872Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GDIC1gene8149Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G03080.1NO15G03080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G03080 ID=NO15G03080|Name=NO15G03080|organism=Nannochloropsis oceanica|type=gene|length=3984bp
AAACACAGCACCCACACACGTCCAAGGCACCATGGCCGACACCACCGGCC
ACCCGCTTGATGGCGCCCACACGGAAATTGCTCCTCCCCCTCCTGCTTCG
CCTGCGGTCAAGGAGGAGGAAGAGGGGCCCGCCGCGGCCCCTGCCGAGGA
AGCTGGCCCGGACATGAGCTGGTTGCCCCCTGGGAAGAAGCCTTTGGCTG
ATGGCTTGTACGACGCGATTGTTATGGGGACAGGCTTGAAGgtatgcagg
ttgggggtggttgtaggagagggtgtgcaaggaaggagggcgggaggaag
ccgagaggctggaccgtgagggtaagactgatgagggaggaccttgccga
tagagaagccaggacagactccgattgatgacaaagatgagaatagatga
agagcaagggtgtgccagagagtccgcccccccccgtcttttctctcctc
tcgcttcactcctcccccatcttctctccacagGAATGCATCATCTCGGG
CCTCCTCTCGGTGATGGGCCTTAAAGTCCTCCACATCGACCGTAATGCCT
ACTACGGGGGAGATTGCGCTTCCCTTAACCTTACGAACCTCTATGCGAAG
TTCCGTCCAGAGGGTTCGCGAGAGCCTTCCGCTGCCTTAGGGAGCAACCG
CGACTACAACGTGGATCTGGTGCCCAAGTTCATCATGGCTTGTGGCAATC
TCGTCAAGATCCTCCTTCACACCAAGgtgagaaagggagggaggcaggga
gggaagaagaagggaatggcggagaaaaaggacgagtatctccgtaccct
tttctacgcacccacccccacccgtgatttgtctgctcacacacctacac
gtactcatactcacccatgagacgacatactccgacttcatgcgcagGTG
ACACGGTACCTGGAGTTTAAGAACGTGGATGGCAGCTACGTCTTCCGCCA
GGGCAAGATCTACAAGgtaggcttccctatctccttccctccctccctcc
ctccctcccttaactccttcaatttctctatttcgaccttctgccctcct
tctcacacccacccctccttccctccctccctacttttcgcccagGTCCC
GGCCACCCTTGACGAGGCCCTGATGACGTCTCTGATTGGTCTATTTGAGA
AACGACGTTTCCGAAACTTTTTGTCTTACCTCGCCAAGTATGATGAAAAG
GACCCCAACACCTTCGGAGgtaggaagggagggagggagggagggaagag
gggggatgatgaaaaggaccccaacaccttccgaggtaggaaaggaggga
gggagggaagaggggggatgatgaaaaggaccccaacaccttcggaggta
ggaagggagggagggagggaagaggggggatgatgaaaaggaccccaaca
ccttcggaggtagggagggagggagggagggaagaggggggatttccggt
ggcatttcctcttgcacgttctagattttcctcaactcaacactcagggg
cttatgccacacctctcctacaccttctcgtgccccccctccttccctcc
ctccctccctccttctctccctccctccccacccagGCTACGACTTGACC
CGGATGACGATGCGGGGGTTATACGACAAGTACGGCCTGGACGAGGGCAC
TCGTACCTTCACTGgtaaataaagggagggagggagggagggagggaggg
agggatggatggggagcatgagagatttggggcttgaagggtctttccgt
ggtgttgattttcccttccctccctccctccctccctccctccccgtcca
gGGCACGCTATGGCGCTGCACCTGGACGACACCTACCTCGACCGGCCGGC
CCTGGAGACGGTGAAAGCCATCCAGCTGTATGTCTACTCCCTGGAGCGGT
ACGGGAAGAGCCCCTATATCTACCCCATCTACGGCTTGGGAGgtagggag
ggagggagggagggcgggagggagggacggagagtgggagaaacgaagga
cgtgattaaatctgtctcgatagctacacgcaaataacgaaagacaccct
aagtccctccctccctccttcccttttctccctccctccttttcttcctc
cctctctagGTCTCCCCGAGGGTTTTTCACGCCTGTGCGCCATTAATGGA
GGGACCTTTATGCTGGACCACAGCGTGGACGAAATCCTCTACACGCCCGA
Ggtagggagggagggagggagggaagggagcgaagcaggaaaggagggaa
gggcaaatctgccatcctatccacccgtatatatttcagggtacagagtt
caatccgcccgtcctccctccctccctcccttcctccctccctccctccc
tccctccctaactagGGCATGGCAGAAGGCATCCGTCACGGTGACGAGGT
GGCCAAGGCGAAGTACCTCATTGGGGATCCTTCCTACTTCCCAAAGGATA
GGGTCAAGGTCACAGGACGgtaagggggaaaggagggagggagggaaaga
ggaagaaggtgggatccactcttcttatggcgtctttacacacacacaca
catatatatatattacatatatgtatatccagAGTCGTTCGCTCCATCAT
CCTCATGGACCATCCTGTCGCGAATACCAGgtagataaggagaggggggt
gacaaatttaagttatcaaaaatgcgcgaaaaggggaggaatgaagggag
ggagggaagaaaggatgaatgggaaggggaaatttacgggcattgctccc
tccgcatttcttctcacgcatcctccctcccctcctcccctccccccctc
ccttcctccctcctcccatccctccagCAACTCGGAATCGACCCAGATCA
TCATCCCCGCCTCGGAGCTCAAGCGTCACCATGACGTTTACCTCGCGGTC
GTCTCCTCCGCCCACATGGTGGCAGCGCAAGgtaaggctgtgattaaata
gggtgagggctagcgagtgatcgaatcggattacgtgtgatcaaatgggc
caaggagggattgagagacgggaggctgcatactggatacatatgaaggg
ataaagtgtgggaagaacgcgacgtgtcccgatctgcacttgtttcttat
ttttcattcactcactacctgcatccgtctatcccctaccccattcactg
tacgcagGCAAATTTATCGCGATTGCCTCTACGACCGTGGAGACCGCCAA
TCCACTGCAGGAGCTAGAGCCGGCCGTCCGTCTGCTGGGTAACTACATCG
AGCGATTTGACTCGgtgcgtggagaagaaaggaggggaaaaggatgggag
ggagaaaaatcgagggaaccatttgggagaaagagaggggggagggaggg
agggaggaagggagggagggacatgaggactacgacacgcgcgaccccta
actcatttctctctcattcgtatcctctctccctcgtttcgtctcttttc
ttgctagGTGGAAGAAACGTTTGCTCCTTTGGAGGACGGGAGCAAGGATA
ATTGCTACATCTCCTCTTCCTATGATGCCACCTCCCACTTCGAGACGACG
GCGGAAGATGTTTTGTCTCTCTATCAACGCATCACGGGGAAGGAATTGGA
TTTGACGATTTCCGCGGACACTACCGACGCGGATTATTGAGGGGAAGGAA
GAGGAAGGGGAAGAGGAGGAAGAGGAGCAGGAGGAGCAGGAGGAGGAGGA
GAGGGAGGGGGAGAAGGAGGAGGACGGGAGGAGGAGGAGCAGGAGCAGGA
GCACATGTGGGGGGGGAGGAGGAGGGCGTCTTGTAACGGGTGGGGGGCGG
ACACCAGAGAGCAGAAGAAGAACAGGCGCGACGAATCTGGTGATGGGTTT
TGAATAGAGACGGGAAGGTAGTAGCAGATGGAGTGAAAGTCAGAAAAGGG
GGCGTAAGAACAAAGAAAAAACATGACAGTCGACGAGACAATGGAGTGAG
GAGGTCGGCCTAGGGGTGAGACCGAGCAGCAGCC
back to top

protein sequence of NO15G03080.1

>NO15G03080.1-protein ID=NO15G03080.1-protein|Name=NO15G03080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=501bp
MADTTGHPLDGAHTEIAPPPPASPAVKEEEEGPAAAPAEEAGPDMSWLPP
GKKPLADGLYDAIVMGTGLKECIISGLLSVMGLKVLHIDRNAYYGGDCAS
LNLTNLYAKFRPEGSREPSAALGSNRDYNVDLVPKFIMACGNLVKILLHT
KVTRYLEFKNVDGSYVFRQGKIYKVPATLDEALMTSLIGLFEKRRFRNFL
SYLAKYDEKDPNTFGGYDLTRMTMRGLYDKYGLDEGTRTFTGHAMALHLD
DTYLDRPALETVKAIQLYVYSLERYGKSPYIYPIYGLGGLPEGFSRLCAI
NGGTFMLDHSVDEILYTPEGMAEGIRHGDEVAKAKYLIGDPSYFPKDRVK
VTGRVVRSIILMDHPVANTSNSESTQIIIPASELKRHHDVYLAVVSSAHM
VAAQGKFIAIASTTVETANPLQELEPAVRLLGNYIERFDSVEETFAPLED
GSKDNCYISSSYDATSHFETTAEDVLSLYQRITGKELDLTISADTTDADY
*
back to top
Synonyms
Publications