NO15G02860, NO15G02860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02860 vs. NCBI_GenBank
Match: EWM22385.1 (c-myb like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 291.6 bits (745), Expect = 5.600e-75 Identity = 135/184 (73.37%), Postives = 155/184 (84.24%), Query Frame = 0 Query: 255 SPAYHTSNGKRKLPTPWTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRKVERKEKRARVQREKS 439 +P KRK+PTPWTP EDARLREGI++VGPRQW RI+QEF++G RSETQCYQRWERTLKPGVKTGPWT +EDA+L ACVQ+GMTRWSEI+KRIPGRLSKRVRERWTCQL+P ++ GL PWT EEE + R RLGNRWVEIAKL PGRSENDVKNKAYC+LRK ER+ R R ++EK+ Sbjct: 239 TPPNPVGGRKRKVPTPWTPAEDARLREGIQVVGPRQWLRISQEFMRGVRSETQCYQRWERTLKPGVKTGPWTREEDAVLTACVQSGMTRWSEIAKRIPGRLSKRVRERWTCQLHPSRKHHGLVPWTPEEEARLASVRARLGNRWVEIAKLFPGRSENDVKNKAYCSLRKQERRASRVRAEQEKA 422
BLAST of NO15G02860 vs. NCBI_GenBank
Match: GBG26897.1 (Transcription factor MYB3R-4 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 170.2 bits (430), Expect = 1.900e-38 Identity = 76/153 (49.67%), Postives = 110/153 (71.90%), Query Frame = 0 Query: 271 WTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRK 424 WT EEDA+LREG+ +G +W++I++E+L G RS+ QC RW++ L+PG+ GPWT +ED ++ AC++ +T+WSEI++RIPGR+ K+ RERW L+P + + WT+EEEK + A+ GNRW EIAKLLPGR EN VKN+ +R+ Sbjct: 175 WTREEDAKLREGVTAIGATKWKKISEEYLGGRRSDVQCLHRWQKVLRPGLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDP---TIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRR 324
BLAST of NO15G02860 vs. NCBI_GenBank
Match: EWM20993.1 (myb-related 3r-1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 161.8 bits (408), Expect = 6.600e-36 Identity = 72/146 (49.32%), Postives = 104/146 (71.23%), Query Frame = 0 Query: 271 WTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNK 417 WT E+DA+LR+ + GP+ W++I+QE QG ++TQC RW + L+PG+ GPW +EDA++L C+++G+T+WSEI++RIPGRL K+ RERW L+P S + W+ EE+K + + R GN W +IA LLPGRSEN VKN+ Sbjct: 133 WTDEQDAKLRKVVASRGPKNWKKISQEHFQGLYTDTQCLNRWYKVLRPGLVKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDP---SVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNR 275
BLAST of NO15G02860 vs. NCBI_GenBank
Match: EWM26309.1 (transcriptional activator myb [Nannochloropsis gaditana]) HSP 1 Score: 161.0 bits (406), Expect = 1.100e-35 Identity = 80/180 (44.44%), Postives = 115/180 (63.89%), Query Frame = 0 Query: 256 PAYHTSNGKRKLPTPWTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRKVERKEKRARVQR 436 P+ GKR W+ EEDA LR + GP+ W++I+ EFL+G RS+ QC RW++ L+PG+ GPWTA+ED I+L CVQ G +W+ I+ IPGRL K+ RERW L+P + WT+EE++ + EA+ + GN W +IA+ LPGRSEN VKN+ + R+ E+ RA ++ Sbjct: 156 PSSGPGGGKR-----WSKEEDAMLRAAVASKGPQCWKQISDEFLEGKRSDVQCLHRWQKVLQPGLVKGPWTAEEDQIILRCVQEGNLKWAAIADLIPGRLGKQCRERWYNNLDPALKK---GEWTEEEDRVLAEAQAKWGNAWTKIARSLPGRSENAVKNRWNSSTRRREKAAGRAATKK 327
BLAST of NO15G02860 vs. NCBI_GenBank
Match: GBG33445.1 (Transcription factor MYB3R-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 157.5 bits (397), Expect = 1.300e-34 Identity = 71/154 (46.10%), Postives = 107/154 (69.48%), Query Frame = 0 Query: 271 WTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKL-LPGRSENDVKNKAYCTLRK 424 WT ED L+ +++VG R W+RIA E+L TR++ QC RW++ L+PG+ GPW +ED + AC+++G+TRWSEI+ R+PGR+ K+ RERW L+P+ R+ WT+EE++ + E + +LGN+W +IAK+ LPGR EN VKN+ R+ Sbjct: 136 WTKAEDESLKLAVKLVGARNWKRIASEYLADTRTDVQCLHRWQKVLRPGLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTD---EWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWNAATRR 286
BLAST of NO15G02860 vs. NCBI_GenBank
Match: GBG27799.1 (Transcription factor MYB3R-2 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 157.5 bits (397), Expect = 1.300e-34 Identity = 73/154 (47.40%), Postives = 111/154 (72.08%), Query Frame = 0 Query: 279 LREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRKVERKEKRAR 433 L++ + +G R W+RI+QEFL G RS+ QC RW++ LKPG+ GPWT +ED ++ +++G+T+WSEI+ IPGR+ K+ RERW L+P + G WT+EE++ + E +E+LGNRW EIAK+LPGRSEN VKN+ +R+ + ++KR++ Sbjct: 2 LKKAVDTIGARNWKRISQEFLNGKRSDVQCLHRWQKVLKPGLIKGPWTKEEDDTIMEAIESGVTKWSEIATLIPGRIGKQCRERWFNHLDPSIKKGG---WTEEEDRILVEYQEKLGNRWCEIAKVLPGRSENAVKNRWNSAMRR-KFQQKRSK 151
BLAST of NO15G02860 vs. NCBI_GenBank
Match: XP_002290424.1 (MYB DNA binding protein/ transcription factor-like protein, partial [Thalassiosira pseudonana CCMP1335] >EED92176.1 MYB DNA binding protein/ transcription factor-like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 153.3 bits (386), Expect = 2.400e-33 Identity = 67/146 (45.89%), Postives = 107/146 (73.29%), Query Frame = 0 Query: 271 WTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNK 417 W+ +ED LR + +G ++ I+++ GTR+E QC RW+++L+PG+ G W+ +EDA ++ CV++G+T+WSEI+KR+PGR+ ++V+E W L+PD + KG+ W++ E T+ A+++LGNRW EIAKL+PGRSEN VKN+ Sbjct: 2 WSEQEDQYLRRAVHTLGENSFKMISEKVFHGTRTEVQCKNRWKKSLQPGLIKGKWSTEEDATIIKCVESGITKWSEIAKRLPGRIGEQVKEHWVNNLDPDVK-KGV--WSQTEMNTLINAQKQLGNRWSEIAKLIPGRSENSVKNR 144
BLAST of NO15G02860 vs. NCBI_GenBank
Match: EWM22951.1 (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 153.3 bits (386), Expect = 2.400e-33 Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 0 Query: 271 WTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRKVER 427 WT +ED +LR+G+ VG W I+ +FL RS QC RW++ L+PG+ GPWT +ED I++ C Q G+T W EI+ R+ GRL K+ R+RW L+P + WT+EE+K + E R GN W +IAKLLPGR EN +KN+ Y R ER Sbjct: 165 WTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDP---AISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQER 317
BLAST of NO15G02860 vs. NCBI_GenBank
Match: EWM22952.1 (myb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 153.3 bits (386), Expect = 2.400e-33 Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 0 Query: 271 WTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQAGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRKVER 427 WT +ED +LR+G+ VG W I+ +FL RS QC RW++ L+PG+ GPWT +ED I++ C Q G+T W EI+ R+ GRL K+ R+RW L+P + WT+EE+K + E R GN W +IAKLLPGR EN +KN+ Y R ER Sbjct: 65 WTSKEDEQLRKGVTAVGECNWDTISTQFLHSQRSAIQCSHRWQKVLRPGLVKGPWTQEEDDIIVVCRQNGVTEWKEIALRLEGRLGKQCRDRWLNHLDP---AISKHYWTEEEDKVLAEGRRLYGNAWAKIAKLLPGRPENSIKNRWYSARRAQER 217
BLAST of NO15G02860 vs. NCBI_GenBank
Match: GAY01574.1 (myb-like DNA-binding protein, putative [Pythium insidiosum]) HSP 1 Score: 148.7 bits (374), Expect = 5.800e-32 Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 0 Query: 243 AGEDDGVSTLSSSPAYHTSNGKRKLPTPWTPEEDARLREGIRIVGPRQWQRIAQEFLQGTRSETQCYQRWERTLKPGVKTGPWTADEDAILLACVQ---AGMTRWSEISKRIPGRLSKRVRERWTCQLNPDKRSKGLAPWTKEEEKTMEEARERLGNRWVEIAKLLPGRSENDVKNKAYCTLRK 424 A + GV+T S+P+ S+ P WT EEDARLRE ++ G + W+RIA+ G R++ QC RW + LKPG+ GPWT +ED +LL+ ++ G RW +I+ +PGR+ K+ RERW L+ R WT EE++ + +++LGN+W EIAK+LPGR+EN VKN+ R+ Sbjct: 115 AAANAGVATAPSTPSSLLSSHP---PVKWTKEEDARLREAVQRFGGKNWKRIAETLXHG-RTDVQCLHRWNKVLKPGLVKGPWTPEEDRVLLSLIKRYGVGKIRWCDIALHLPGRIGKQCRERWCNHLDSSIRK---GQWTPEEDELVFSLQQQLGNKWSEIAKMLPGRTENAVKNRFNSAARR 291 The following BLAST results are available for this feature:
BLAST of NO15G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02860 ID=NO15G02860|Name=NO15G02860|organism=Nannochloropsis oceanica|type=gene|length=2063bpback to top protein sequence of NO15G02860.1 >NO15G02860.1-protein ID=NO15G02860.1-protein|Name=NO15G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bpback to top Synonyms
Publications
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