NO15G02850, NO15G02850 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02850 vs. NCBI_GenBank
Match: EWM22347.1 (trna pseudouridine synthase pus10 [Nannochloropsis gaditana]) HSP 1 Score: 538.5 bits (1386), Expect = 2.800e-149 Identity = 325/610 (53.28%), Postives = 402/610 (65.90%), Query Frame = 0
Query: 16 PVELLPSL-RPNGDHW-LPAFQRLYPKLECLRCSLRVAGVWQRHVFLASEKRLRATLAPVLG-DLTLATARPDAAVCPLCLGLLQDPDLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKET------------------KLGFILGLTLPASLAIRDRAALHWLEASVNL-FYCRSGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRH-ICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQKKEAA--SPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVVVRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
PV PSL P+ D W LPAF LYPK+ C+RCSLR+AGV + A E++LRATL G +++ AT R +CPLCLG+LQ D L S++++AI+ QIK K YVLP +S +K T K+ FILG++LP S+AIRDRAAL W+ + G ++VK+ILK +E L ++ PC A S PSPG ++DLSF+ D DY + ++P GKA+ RTRKR++H +N ENLC +T+V V+ A GD VR +A +F N + + AA +PA ++V VTREA +L G+YLK SREMPQTLW++EGG RKGKASVEEV++EPV +W S VL+GSGREDMDVRMLG GRPFLL+VNDPRR+P G+EEVA L+AAIN GLN GDV V L +SD+ +VK MHAGA EK K+Y+CRVWVGG+V R L+ LE ++L V Q TPIRVLHRRALLTR K I+EMRC DVKVVE GE XXXXXXXXXA+GTYFTLHLRT+AGTYIKEFVHGDMGRTRP+VG LLGGL ADLLALDVTG+
Sbjct: 2 PVSPPPSLPLPDEDTWSLPAFSLLYPKINCIRCSLRLAGVCDAEILRAPERQLRATLCSAQGAEISHATCR----MCPLCLGILQSSG---DRELGSALLDAILAQIKTKKYVLPTGGDSPDMTQHKSTTDPVGEMVAEHSKYLLERKVPFILGVSLPGSVAIRDRAALEWVACEQQTGRHQDPGRRLDVKEILKAVLESCLPKHYPCLYAA-STPSPGALRVDLSFWHAGADEADYHQGVRILLPNA--TGKAFNRTRKRRRHEESNQENLCNATVVARVLQAATGDPNVRSGLAVFF----ARNLMPPSTHSPTAYAALETPAASSVQVTREAIFLAGRYLKLSREMPQTLWVVEGGRRKGKASVEEVVAEPVLDWTSATSAVLIGSGREDMDVRMLGTGRPFLLRVNDPRRIP----GREEVAGLEAAINQTTGLNSGGDVRVHGLRLSDKHEVKAMHAGATEKVKMYSCRVWVGGRVDRALLATSLEGSKELVVAQKTPIRVLHRRALLTRPKVIHEMRCTDVKVVE-GGE--------------XXXXXXXXXAVGTYFTLHLRTSAGTYIKEFVHGDMGRTRPSVGDLLGGLEADLLALDVTGI 578
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_019449496.1 (PREDICTED: putative tRNA pseudouridine synthase Pus10 [Lupinus angustifolius] >XP_019449497.1 PREDICTED: putative tRNA pseudouridine synthase Pus10 [Lupinus angustifolius]) HSP 1 Score: 204.9 bits (520), Expect = 7.300e-49 Identity = 177/568 (31.16%), Postives = 255/568 (44.89%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGDLTLATARPDAAVCPLCLGLLQ-----DPDLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLEA---SVNLFYCR-SGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQKKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVV-VRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C+RC RV GV R AS L L +T + VC LCLG+LQ + +L+ + + I +KK+GY + GF +++P L D + ++++ S F + + KD LKF++ L+ L C + S F++ L+ Y H + R KR+K +NL VG + + +DW E L E A P T RE +Y G+YLK+SR + QT W+++ R G+ASVEE+I + + C +S +GRED+DVRMLG GRPFL++V + R +P E ++ ++ IN N E +V VR L++ +M G AEKQK YA VW+ + E+L + S +DL V Q TPIRVLHRR+ L R K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT+P++GS+L G A++L LDVT +
Sbjct: 59 CVRCIFRVFGV--RGCIYASPDLAVNNLKDNLNSSENSTTAKETKVCRLCLGILQFRFVDEKELVVKKDSVDDMAVLIAEIVKKEGYQVD----------------GFSFEVSVPPILLENDNSFWSYMKSKFGSEPWFQEKLHTERISTKDALKFSLVSPLENLLDCKSNMSS------FRIRLT----------YNHTKGLNGTEKCSDNDER--SKRRKTGESNL------------VGEKPFSSSLENESSDWSESLLE-------------MANEPCHFTCFCYREPYYFGGRYLKYSRNVSQTRWIID-DERMGEASVEEIIGGNILQACRGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNARLLPSELFAKD----IENLIN-----NVENKLVRVRNLNLVGSHGWNLMREGEAEKQKQYAALVWISRPLKDEDLQH-ISSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKVETI------------------------------AGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSIL-GCRAEILQLDVTDI 523
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_008377102.1 (PREDICTED: putative tRNA pseudouridine synthase Pus10 [Malus domestica]) HSP 1 Score: 204.5 bits (519), Expect = 9.500e-49 Identity = 173/577 (29.98%), Postives = 269/577 (46.62%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGD----LTLATARPDAAVCPLCLGLLQ-----DPDLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLEASVNLFYCRSGGP----VEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENL-----CTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQKKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVV-VRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C RC LR+ G+ + + +S R+ L+ VLGD L + R + VC +CLG+LQ D L+ + S + +I I+++G+ + GF L +++P + DR A +++ G + KD LK ++ E L+ L C ++ S F++ L++ I +I + EG ++RK +G L+ + C+ V V + + ECL + ++++ P R Y+ G+YLK+SR + Q+ W+++ R G+ASVEE++ V C ++ +GRED+DVRMLG GRPFLL++ + R VP + + V +L+ AIN N E +V V+ L + D + +M G AEKQK Y VW+ + E+L + S +D ++Q TPIRVLHRR+ L R K I+ MR E + YF LHL T AGTYIKEFVHGD+GRT+P++GS+ A++L LDVT V
Sbjct: 42 CTRCILRLFGIREHDYYRSSLS--RSILSSVLGDSEKHLVDSNVR-EPVVCRVCLGILQFTYSADNKLVVERESASELAVSISDLIRQQGFQID----------------GFSLEVSIPPIIQENDRIAWLYMKRKFESELWFQGKSLSECISAKDALKISLTEILETMLGCKSSISS------FRIRLTY---------THRIATITVDSSNEG-----CKRRKTGSGNGLDRINDDIKCSGFSTSEADAVVQ-RSFVSLQAIESPECL----------KLPLEQSSEPCCLEFLCYRTQIYVGGRYLKYSRNVSQSCWIID-DERMGEASVEEILGSNVLPICRGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARLVPSD----DSVKSLEIAIN-----NLENKLVGVKNLKLVDSQSWDLMREGEAEKQKQYVALVWISRPLKDEDL-HFISSLKDTHIQQSTPIRVLHRRSPLEREKIIHWMRIEKI------------------------------VGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSIF-SCRAEILQLDVTDV 526
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_013703655.1 (putative tRNA pseudouridine synthase Pus10 isoform X1 [Brassica napus]) HSP 1 Score: 201.4 bits (511), Expect = 8.000e-48 Identity = 164/563 (29.13%), Postives = 257/563 (45.65%), Query Frame = 0
Query: 43 CLRCSLR---VAGVWQRHVFLASEKRLRATLAPVLGDLTLATARPDAAVCPLCLGLLQDP-DLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLEASVNLFYCRSGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCT-STMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQKKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVVVRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C RC LR V + + S LR LG A P+ ++C +CLG+LQ K T + S V I +K++G+ F+L ++LP++++ +RA L +L+ + V VKD LK + + P A+ + +F + L++ + S +A + T+ +K T++ L S+ + HV +G C+SE F K+ + P + +V + + G+Y K+SR + Q+ W+++ R G+ASVEE+I + C +S +GRED+DVRMLG GRPFL++V + R+ P ++ E I K+ + + V V++L +M G AEKQK YA VW+ + E+ + + S ++L + Q TPIRVLHRR+ L R + I+ M+ E +K YF LHL T AGTYIKEFVHGD+GRT P++GS+L G A+++ LDVT V
Sbjct: 34 CERCILRLVTVTATFDSDLATVSSSTLRGW----LGSGVEEAASPEPSICIVCLGVLQFVFSDAKQTLVKSDHVAWITDLVKQQGHEFD----------------SFVLEVSLPSTISENERAVLLYLKGKYSDEAWLQSEKVSVKDALKVLVLD------PLRASLGAKSDSSSFHIRLTYSQASDEA-----------------QGLSETKHERKKRKTDIPTLADFSSAIFHVFYADEENGS---------NCMSENPF---------KKVSEPCILSVHCNKMPIFFGGRYFKYSRNVSQSRWIID-DERMGEASVEEIIGGSILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRKCPSQQSLTE--------IEEKINNSEKKLVGVKDLKFIGSECWAMMREGEAEKQKQYAALVWISRPLEEEDCNS-VSSMKELKILQKTPIRVLHRRSQLERERTIHWMKVEKIK------------------------------GNAHYFLLHLCTQAGTYIKEFVHGDLGRTTPSMGSIL-GCRAEIIQLDVTDV 494
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_007017946.2 (PREDICTED: putative tRNA pseudouridine synthase Pus10 [Theobroma cacao]) HSP 1 Score: 201.4 bits (511), Expect = 8.000e-48 Identity = 171/573 (29.84%), Postives = 262/573 (45.72%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGDLTLATARPDAAVCPLCLGLLQDP--DLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALH----------WLEASVNLFYCRSGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQK---KEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVVVRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C RC LR+ G+ + H++ S ++ L +L + T + + C +CLG+LQ D ++T + + + L I E V+ G + GF L +++P + + + L W + + L C S VKD+LKFAI + L+ L A+A S F++ L++ ++ R +++ GT EN + V+ G + S G T EH + ++ + P R YL G+YLK+SR + QT W+++ R G+ASVEE+I + C+ ++ +GRED+DVRMLG GRPFLL++ + R+VP E +E + + N +G V+ L V + +MH G AEKQK Y VW+ + E++ + + D+ + Q TPIRVLHRR+ L R K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT+P+VGS+L G A++L LDVT V
Sbjct: 50 CARCVLRLFGI-EEHIYCHSSFS-QSMLGSILEEETSFKSEVEFQFCSVCLGVLQFSYCDDGEETVVKKESAKDMALSI-------AELVKQEGHQID-----GFSLEVSVPPLILENESSLLSHMKKKYESEPWFQERLLLSKCHS-----VKDVLKFAITKPLETLLGVKASASS------FRIRLTYTHKRASKK-------------VQNSVERNQECKRRKTGT--ENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQDQETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIID-EERMGEASVEEIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIVKEMESKINGLENKLVG--------VKNLKVVGSQGWALMHEGEAEKQKQYCALVWISRPLEDEDM-QTISLLNDMKILQRTPIRVLHRRSPLEREKIIHWMKIERI------------------------------AGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSVGSIL-GCRAEILQLDVTDV 541
BLAST of NO15G02850 vs. NCBI_GenBank
Match: OIW07930.1 (hypothetical protein TanjilG_20031 [Lupinus angustifolius]) HSP 1 Score: 201.1 bits (510), Expect = 1.000e-47 Identity = 174/568 (30.63%), Postives = 252/568 (44.37%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGDLTLATARPDAAVCPLCLGLLQ-----DPDLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLEA---SVNLFYCR-SGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQKKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVV-VRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C+RC RV GV R AS L L +T + VC LCLG+LQ + +L+ + + I +KK+GY + GF +++P L D + ++++ S F + + KD LKF++ L+ L C K ++S F+ + TY K T K + ++VG + + +DW E L E A P T RE +Y G+YLK+SR + QT W+++ R G+ASVEE+I + + C +S +GRED+DVRMLG GRPFL++V + R +P E ++ ++ IN N E +V VR L++ +M G AEKQK YA VW+ + E+L + S +DL V Q TPIRVLHRR+ L R K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT+P++GS+L G A++L LDVT +
Sbjct: 59 CVRCIFRVFGV--RGCIYASPDLAVNNLKDNLNSSENSTTAKETKVCRLCLGILQFRFVDEKELVVKKDSVDDMAVLIAEIVKKEGYQVD----------------GFSFEVSVPPILLENDNSFWSYMKSKFGSEPWFQEKLHTERISTKDALKFSLVSPLENLLDC-------------KSNMSSFR--------------IRLTYNHTKGLNGTEKCSDN----------DERESNLVGEKPFSSSLENESSDWSESLLE-------------MANEPCHFTCFCYREPYYFGGRYLKYSRNVSQTRWIID-DERMGEASVEEIIGGNILQACRGDSFKFHAAGREDIDVRMLGPGRPFLVEVQNARLLPSELFAKD----IENLIN-----NVENKLVRVRNLNLVGSHGWNLMREGEAEKQKQYAALVWISRPLKDEDLQH-ISSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKVETI------------------------------AGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSIL-GCRAEILQLDVTDI 516
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_015575544.1 (PREDICTED: putative tRNA pseudouridine synthase Pus10 isoform X4 [Ricinus communis]) HSP 1 Score: 199.9 bits (507), Expect = 2.300e-47 Identity = 174/590 (29.49%), Postives = 264/590 (44.75%), Query Frame = 0
Query: 37 LYPKLECLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGD-----------LTLATARPDAAVCPLCLGLLQ-----DPDLMKDTPLMSSVVEAIVLQIKKKGYVLPE---AVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLEASVNLFYCRSGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQ-------KKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVVVRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
L P C+RC R+ GV Q H+F + R+ + +LG+ T + D +C +CLG+LQ D ++ ++ +I IK++G+ + V + I E + + + L W + SV+ C K+ LKFAI L++ L S PS +L + KPS I P + G+ +R + A ++ N + G D + K + SE +F + H+ K++ P R Y G+YLKFSR + QT W+++ R G+AS+EE+I + C+ +S +GRED+DVRMLG GRPFL+++ +PR++P E L I K+ + V VR L + +MH G AEKQK Y VW+ + ++L + + S +D+ + Q TP+RVLHRR+ L R+K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT P++GS+L G A++L LDVT V
Sbjct: 9 LMPLKICMRCIFRLLGV-QGHIFF-TYPLSRSLMHNILGESWKDDEDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIAELIKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSEL---------WFQESVSKCIC-------TKEALKFAIANPLERML----DVKSGPSSCRIRLTYTQAKPS----------GIAPNSVPGGEGCKRRKTGITDAPESVNNELINARNG------CFDSSMYKGIDS-----SESSFCG-LENHESSECIFPKEKVKEPCNLLFLCYRTPIYFGGRYLKFSRNVSQTRWIID-DERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNPRQLPSE--------TLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMHEGEAEKQKQYCALVWISRPLEDQDL-QSIASLKDMQILQRTPVRVLHRRSPLERQKIIHWMKIERL------------------------------TGSCQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSIL-GCRAEILQLDVTEV 513
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_024024567.1 (putative tRNA pseudouridine synthase Pus10 isoform X1 [Morus notabilis]) HSP 1 Score: 199.5 bits (506), Expect = 3.000e-47 Identity = 173/591 (29.27%), Postives = 269/591 (45.52%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGDLT----------------------LATARPDAAVCPLCLGLLQ-----DPDLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLE---ASVNLFYCRSGGPVE-VKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDG-EVRKKMADWFECLSEGNFIDHTDEHQKKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVV-VRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
CLRC LR+ G+ + ++ L + L+ V GDLT L + A+C LCLG+LQ D + +IV +K++G+ + GF L +++P + +++ +++ S + F +S + VKD LK + + L++ L C + + TF++ L++ + S M +T++E K + RK +LE + DG +V +D + E + D + P R Y G+YLK+SR + QT W+++ R G ASVEE+I + C +S +GRED+DVRMLG GRPFL+++ + R +P + E+V ++ IN N E +V VR L + + +MH G AEKQK YA VW+ + ++E + + S +++ V Q TPIRVLHRR+ L R K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT P++G++L G A++L LDVT V
Sbjct: 53 CLRCILRLLGI-RGELYDNCTLSLSSILSSVFGDLTDSEKHTINDASVENGKCSESPNLKELEVNEALCSLCLGILQFSYCDDKASVVRKDSAYDFASSIVELVKQEGHQID----------------GFSLEVSIPPVIQENEQSVCLYMKKKYESESWFQRKSLSERDSVKDALKTCMTKSLEKLLDCNS------NMSTFRIRLTYTQAE---------SSKMVQTFVERKQGCKRRKAVTGTDNDLETV---------------DGIKVANFPSDEIAAVIESSLETCQDSGLSDRVSEPCQLVFHCCRTHIYFGGRYLKYSRNVSQTRWIID-DERMGDASVEELIGSNILPVCRGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNGRHLPCD----EDVKNIEEKIN-----NLENKLVGVRNLKIMGSQGWTLMHEGEAEKQKQYAALVWISRPL-KDEDFQSISSYKEMRVVQKTPIRVLHRRSPLEREKIIHWMKIEKI------------------------------VGSSQYFLLHLCTQAGTYIKEFVHGDLGRTYPSIGTIL-GCRAEILQLDVTDV 554
BLAST of NO15G02850 vs. NCBI_GenBank
Match: EOY15171.1 (Pseudouridine synthase family protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 198.7 bits (504), Expect = 5.200e-47 Identity = 171/573 (29.84%), Postives = 262/573 (45.72%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGDLTLATARPDAAVCPLCLGLLQDP--DLMKDTPLMSSVVEAIVLQIKKKGYVLPEAVESSGTISNKETKLGFILGLTLPASLAIRDRAALH----------WLEASVNLFYCRSGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQK---KEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVVVRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C RC LR+ G+ + H++ S ++ L +L + T + + C +CLG+LQ D ++T + + + L I E V+ G + GF L +++P + + + L W + + L C S VKD+LKFAI + L+ L A+A S F++ L++ ++ R +++ GT EN + V+ G + S G T EH + ++ + P R YL G+YLK+SR + QT W+++ R G+ASVEE+I + C+ ++ +GRED+DVRMLG GRPFLL++ + R+VP E +E + + N +G V+ L V + +MH G AEKQK Y VW+ + E++ + + D+ + Q TPIRVLHRR+ L R K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT+P+VGS+L G A++L LDVT V
Sbjct: 50 CARCVLRLFGI-EEHIYCHSSFS-QSMLGSILEEETSFKSEVEFQFCSVCLGVLQFSYCDDGEETVVKKESAKDMALSI-------AELVKQEGHQID-----GFSLEVSVPPLILENESSLLSHMKKKYESEPWFQERL-LSKCHS-----VKDVLKFAITKPLETLLGVKASASS------FRIRLTYTHKRASKK-------------VQNSVERNQECKRRKTGT--ENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQDQETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIID-EERMGEASVEEIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGRPFLLEIQNARQVPSELIVKEMESKINGLENKSVG--------VKNLKVVGSQGWALMHEGEAEKQKQYCALVWISRPLEDEDM-QTISLLNDMKILQRTPIRVLHRRSPLEREKIIHWMKIERI------------------------------AGSSQYFLLHLCTQAGTYIKEFVHGDLGRTQPSVGSIL-GCRAEILQLDVTDV 540
BLAST of NO15G02850 vs. NCBI_GenBank
Match: XP_002510624.1 (PREDICTED: putative tRNA pseudouridine synthase Pus10 isoform X1 [Ricinus communis] >EEF52811.1 conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 198.7 bits (504), Expect = 5.200e-47 Identity = 172/584 (29.45%), Postives = 262/584 (44.86%), Query Frame = 0
Query: 43 CLRCSLRVAGVWQRHVFLASEKRLRATLAPVLGD-----------LTLATARPDAAVCPLCLGLLQ-----DPDLMKDTPLMSSVVEAIVLQIKKKGYVLPE---AVESSGTISNKETKLGFILGLTLPASLAIRDRAALHWLEASVNLFYCRSGGPVEVKDILKFAIEEHLQQYLPCFATAPSPPSPGTFKLDLSFFKPSVDADDYRHICSIMPRTYLEGKAYRRTRKRKKHAGTNLENLCTSTMVGHVVGVAAGDGEVRKKMADWFECLSEGNFIDHTDEHQ-------KKEAASPAVTTVSVTREAFYLKGKYLKFSREMPQTLWLLEGGVRKGKASVEEVISEPVREWCEPESVVLMGSGREDMDVRMLGHGRPFLLQVNDPRRVPKEEGGQEEVAALQAAINAKMGLNREGDVVVRELSVSDRRQVKIMHAGAAEKQKVYACRVWVGGKVGREELSKCLESKRDLAVEQMTPIRVLHRRALLTRRKDIYEMRCEDVKVVEKEGEXXXXXXXXXXXXXXXXXXXXXXXALGTYFTLHLRTAAGTYIKEFVHGDMGRTRPNVGSLLGGLSADLLALDVTGV 601
C+RC R+ GV Q H+F + R+ + +LG+ T + D +C +CLG+LQ D ++ ++ +I IK++G+ + V + I E + + + L W + SV+ C K+ LKFAI L++ L S PS +L + KPS I P + G+ +R + A ++ N + G D + K + SE +F + H+ K++ P R Y G+YLKFSR + QT W+++ R G+AS+EE+I + C+ +S +GRED+DVRMLG GRPFL+++ +PR++P E L I K+ + V VR L + +MH G AEKQK Y VW+ + ++L + + S +D+ + Q TP+RVLHRR+ L R+K I+ M+ E + YF LHL T AGTYIKEFVHGD+GRT P++GS+L G A++L LDVT V
Sbjct: 59 CMRCIFRLLGV-QGHIFF-TYPLSRSLMHNILGESWKDDEDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIAELIKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSEL---------WFQESVSKCIC-------TKEALKFAIANPLERML----DVKSGPSSCRIRLTYTQAKPS----------GIAPNSVPGGEGCKRRKTGITDAPESVNNELINARNG------CFDSSMYKGIDS-----SESSFCG-LENHESSECIFPKEKVKEPCNLLFLCYRTPIYFGGRYLKFSRNVSQTRWIID-DERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEIQNPRQLPSE--------TLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMHEGEAEKQKQYCALVWISRPLEDQDL-QSIASLKDMQILQRTPVRVLHRRSPLERQKIIHWMKIERL------------------------------TGSCQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSIL-GCRAEILQLDVTEV 557 The following BLAST results are available for this feature:
BLAST of NO15G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02850 ID=NO15G02850|Name=NO15G02850|organism=Nannochloropsis oceanica|type=gene|length=2177bpback to top protein sequence of NO15G02850.1 >NO15G02850.1-protein ID=NO15G02850.1-protein|Name=NO15G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=628bpback to top Synonyms
Publications
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