NO15G02680, NO15G02680 (gene) Nannochloropsis oceanica

Overview
NameNO15G02680
Unique NameNO15G02680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2370
Alignment locationchr15:731401..733770 +

Link to JBrowse

Properties
Property NameValue
DescriptionCryptic tubulin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:731401..733770 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
GO:0003924GTPase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
GO:0005874microtubule
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
GO:0007017microtubule-based process
GO:0007010cytoskeleton organization
Vocabulary: INTERPRO
TermDefinition
IPR036525Tubulin/FtsZ_GTPase_sf
IPR008280Tub_FtsZ_C
IPR003008Tubulin_FtsZ_GTPase
IPR002967Delta_tubulin
IPR000217Tubulin
Homology
BLAST of NO15G02680 vs. NCBI_GenBank
Match: EWM22340.1 (cryptic tubulin [Nannochloropsis gaditana])

HSP 1 Score: 539.3 bits (1388), Expect = 1.500e-149
Identity = 308/587 (52.47%), Postives = 386/587 (65.76%), Query Frame = 0
Query:    1 MASTTLHVHVGQCGNQVGERFWSLAATDASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDACITDSSGRANNWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGPFSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSR-MPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSSWSMS--SSLPSPSSSCRAAAKSGQHQLVARGGEEEGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPT--------SSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGRGAEQGRR 577
            M S TLHVH+GQCGNQ+GE+FWSLAA D    A+A D+ +A++  S   PHP+FHE D +A AVFVDSEAKVVDRLR+N  L+ V+RK+ACITDSSGRANNWAMGFT+SC+EL +  GLFY TVN LRRELER+D LQS+VI+HSLAGGTGSGVGSAL QYLREACP++ ITT SVGPFS+GDCATQWYN+ F+L+AL+E+AD VLYRDND  L  +L  + AA   +G G R M  G G A A + ASMG +N+SLA DLAC+ FPT+TS S+ +    G Y+ WDA  L   C PF YAKFVD RSSWS S  ++LP+ S S +AAA  G H L        G   W ++   LG+ ++A+ P +D +G+ NVT+AAQ  VRG+    +P        +E  +L    RG G             N  +           +  NPY+P     P+   L   LH DLPRAL L  WR   Q  P+ T +S    P+        ++ P SS S G+A+CANRT+M ST+ KVL RAEEM+ H AYLHW+ RHGIE+ DF  AFE LRR+KEEY+E G G+++  R
Sbjct:    1 MVSATLHVHIGQCGNQIGEQFWSLAADDF---AAAADNGDASSF-SPQYPHPLFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSTFTLNALSEHADTVLYRDNDQLLGEYLRVAGAA---EGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCG-GGGYRAWDALALQHDCTPFKYAKFVDNRSSWSTSTATTLPTSSVSFKAAAGHGLHHLPDGRLGGAGGGQWADECVYLGKDVIASFPTEDGRGKANVTLAAQMTVRGVD---LPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQK----------PQTSNPYLP---PTPWHPGLTAFLHHDLPRALRLPSWR---QGSPIGTVFSSHSQPSILPCTSMPAARPFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALR 560          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: XP_005854116.1 (beta-tubulin, partial [Nannochloropsis gaditana CCMP526] >EKU22245.1 beta-tubulin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 177.9 bits (450), Expect = 8.800e-41
Identity = 86/110 (78.18%), Postives = 98/110 (89.09%), Query Frame = 0
Query:   68 SEAKVVDRLRQNPCLSGVIRKDACITDSSGRANNWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVG 178
            SEAKVVDRLR+N  L+ V+RK+ACITDSSGRANNWAMGFT+SC+EL +  GLFY TVN LRRELER+D LQS+VI+HSLAGGTGSGVGSAL QYLREACP++ ITT SVG
Sbjct:    1 SEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVG 110          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETL45946.1 (hypothetical protein L916_04077 [Phytophthora parasitica] >ETP50237.1 hypothetical protein F442_04233 [Phytophthora parasitica P10297] >KUF85870.1 Tubulin delta chain [Phytophthora nicotianae] >KUF91037.1 Dual specificity protein phosphatase 1B [Phytophthora nicotianae])

HSP 1 Score: 164.1 bits (414), Expect = 1.300e-36
Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSS-W------SMSSSLPSPSSSCRAAAKS--------GQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LAA                       AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS  W         S LP   S  +  + S         Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: KUG00955.1 (Tubulin delta chain [Phytophthora nicotianae])

HSP 1 Score: 164.1 bits (414), Expect = 1.300e-36
Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSS-W------SMSSSLPSPSSSCRAAAKS--------GQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LAA                       AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS  W         S LP   S  +  + S         Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADXDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETI52650.1 (hypothetical protein F443_04266 [Phytophthora parasitica P1569])

HSP 1 Score: 163.3 bits (412), Expect = 2.200e-36
Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSS-W------SMSSSLPSPSSSCRAAAKS--------GQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LAA                       AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS  W         S LP   S  +  + S         Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGILE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETK92539.1 (hypothetical protein L915_04123 [Phytophthora parasitica])

HSP 1 Score: 163.3 bits (412), Expect = 2.200e-36
Identity = 169/617 (27.39%), Postives = 250/617 (40.52%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LAA                       AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS        S + S   P P       SS+   A    Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: XP_008901460.1 (hypothetical protein PPTG_08269 [Phytophthora parasitica INRA-310] >ETL99105.1 hypothetical protein L917_03978 [Phytophthora parasitica] >ETM52255.1 hypothetical protein L914_04089 [Phytophthora parasitica] >ETN13439.1 hypothetical protein PPTG_08269 [Phytophthora parasitica INRA-310])

HSP 1 Score: 161.8 bits (408), Expect = 6.500e-36
Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LA                        AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS        S + S   P P       SS+   A    Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETO81292.1 (hypothetical protein F444_04322 [Phytophthora parasitica P1976])

HSP 1 Score: 161.8 bits (408), Expect = 6.500e-36
Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LA                        AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS        S + S   P P       SS+   A    Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADVDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETP22357.1 (hypothetical protein F441_04214 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 161.8 bits (408), Expect = 6.500e-36
Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0
Query:    5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570
            ++H+HVGQCGNQ+G  +W LA                        AS G+++  +    A+   S P P+FH     A  + VDSE KVV    Q         + A    + +GR NNWAMG+          T +   +     L    +++L+RE+ERVD  Q  V+ HSL GGTGSG+G  +L+ +R+  P   I T+SV P  +SGD   Q YN   +L  L + ADAV+Y+DND  L       A      G  +               S+  +N   A DLA + FP  T  + +   F       +  +L    CP   AK ++VRS        S + S   P P       SS+   A    Q ++++R  E     + S G  E    L ++  A+ PR         TIA+ T++RG +P                                                 V +E            A  F   L  ++    P    LA   Q      V  +YS   P +S    +S    + +C N  +  ++  + L+RA+     GAY+HWY +HG+E+ADF  AF++   +  EYE + R
Sbjct:    2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518          
BLAST of NO15G02680 vs. NCBI_GenBank
Match: XP_008123176.1 (PREDICTED: tubulin beta chain, nucleomorph, partial [Anolis carolinensis])

HSP 1 Score: 154.8 bits (390), Expect = 8.000e-34
Identity = 161/558 (28.85%), Postives = 215/558 (38.53%), Query Frame = 0
Query:   11 GQCGNQVGERFWSLAATDASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDACITDSSGRANNWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGPFSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSSWSMSSSLPSPSSSCRAAAKSGQHQLVARGGEEEGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWG 569
            GQCGNQ+G+ +W + A          +  EA A P GS        +D +  A+ VDSE KVV RL Q        R+   I   +GR NNWA G+  S  E      LF +T+ +LR+E+ER D     V+ HSL+GGTG+G+ S L + +RE  P   I + SV P  SG+ + Q YN    LS L  +AD VL   ND  L     TS     G               A    S   +N  +A+ LA +F+P    ++ S  S     +PW   +L RS CP    KF+             + SS+C +                         W  L   +V  LPR+   G P+ + A   + RG               +E S L                                      +NP          DS L     + L +A    PW       P  TTY  D       P       L VCAN +     I +V   A  M    A+LHWY RHG E+  F  AFE LR + E+Y   G
Sbjct:    1 GQCGNQIGQEWWQIIA----------NQGEADASPFGS--------LDGRLSAICVDSEPKVVRRL-QKQIRRKAFRESNLIVGKAGRGNNWAYGYHGSKGE----RDLFSQTMESLRKEVERKDCYCGTVLLHSLSGGTGAGLSSRLCEAIREEYPLGRILSVSVAPHQSGEGSLQPYNALLCLSWLQRFADGVLLFQNDEVLKR--ATSLQPKEGDN-------------AYGQVSFSAMNAYIASCLAGLFYPLKVFTTRSGISL--GQEPW---ELLRSVCPMPTLKFLHT-----------AQSSTCGSV-----------------------HWDRLASSVVQPLPRESPDGNPHCSTALLAMARGP--------------QEHSFL--------------------------------------LNP----------DSVL-----RRLKQAYRCVPW------NPFPTTYWTDPSSGLVAPVGRHHHTLTVCANHSSAADFIQRVAHGAHAMYESRAFLHWYRRHGCEDGHFGEAFETLRSVVEDYHHLG 408          
The following BLAST results are available for this feature:
BLAST of NO15G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22340.11.500e-14952.47cryptic tubulin [Nannochloropsis gaditana][more]
XP_005854116.18.800e-4178.18beta-tubulin, partial [Nannochloropsis gaditana CC... [more]
ETL45946.11.300e-3627.23hypothetical protein L916_04077 [Phytophthora para... [more]
KUG00955.11.300e-3627.23Tubulin delta chain [Phytophthora nicotianae][more]
ETI52650.12.200e-3627.23hypothetical protein F443_04266 [Phytophthora para... [more]
ETK92539.12.200e-3627.39hypothetical protein L915_04123 [Phytophthora para... [more]
XP_008901460.16.500e-3627.23hypothetical protein PPTG_08269 [Phytophthora para... [more]
ETO81292.16.500e-3627.23hypothetical protein F444_04322 [Phytophthora para... [more]
ETP22357.16.500e-3627.23hypothetical protein F441_04214 [Phytophthora para... [more]
XP_008123176.18.000e-3428.85PREDICTED: tubulin beta chain, nucleomorph, partia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL141nonsL141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR064ngnoR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001340NSK001340Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02680.1NO15G02680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554774gene_4829Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100230g3gene8098Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02680.1NO15G02680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02680 ID=NO15G02680|Name=NO15G02680|organism=Nannochloropsis oceanica|type=gene|length=2370bp
GGGAGGTTTGCCACGTACTCGCCAAATGCGACGTTCCCCAATTCTTCCAT
ATTTTCGCAATCCCTGCACCTCTGCACTCAATTCCCACCACCACATACCG
TACCAGACACAGCTCCATTATGGCCTCTACAACGCTGCACGTCCATGTGG
GCCAGTGCGGCAATCAAGTTGGAGAACGATTCTGGTCCTTGGCGGCTACA
GACGCCTCTTCTGGTGCTTCTGCCGTCGACAGCGACGAAGCTGCAGCTAT
CCCGTCGGGCTCCCGCCCGCACCCCATGTTTCACGAGGTAGACAGCAAAG
CGGTTGCTGTCTTTGTGGACAGCGAGGCTAAGGTTGTGGATCGCTTGCGC
CAGAATCCATGTCTGTCGGGAGTCATTCGAAAAGACGCGTGCATTACCGA
CAGCTCGGGGCGGGCCAACAATTGGGCCATGGGTTTTACCGCCTCATGCC
AAGAGCTACGGAAAGGCCATGGACTCTTTTATAAAACCGTAAATACTCTT
CGAAGGGAGCTGGAGCGGGTAGATCGCTTGCAGAGCGTGGTCATACATCA
TAGCTTGGCGGGAGGGACGGGATCGGGAGTAGGGTCGGCGCTGCTGCAGT
ATTTGCGGGAGGCTTGCCCGGCATTGACTATCACCACCTCCTCCGTGGGG
CCTTTTTCGTCGGGGGACTGTGCGACGCAGTGGTATAATACGGCGTTCTC
CTTGAGTGCATTAACAGAGTATGCAGATGCGGTGCTTTATCGAGACAATG
ACATATCGCTGAGCCATCACCTGATGACCTCTGCAGCGGCTTCTCATGGA
AAGGGCAACGGCAGCAGGATGCCCGCCGGGTGGGGCCACGCAGCCGCTAT
AGCAACGGCGTCGATGGGCACAATAAATGATAGCTTGGCCACGGATCTCG
CTTGTGTCTTCTTTCCTACCATTACTTCTTCCTCTCTCTCCTCCTCGTCT
TTTATGGGCTGCTACCAGCCATGGGACGCCCGGCAACTGAGTCGCAGCTG
CTGTCCCTTCACCTATGCTAAGTTTGTGGACGTTCGTTCGTCTTGGTCCA
TGTCGTCCTCCTTACCTTCGCCGTCATCATCTTGCAGAGCAGCAGCGAAA
TCGGGTCAACATCAATTGGTGGCAAGAGGAGGAGAAGAGGAAGGAAGCCG
GGGATGGGGGGAGGACTGGTCAAGCCTAGGGCGGAAGCTGGTGGCCACAT
TACCTCGTAAGGATTTAAAGGGGAGACCGAATGTGACGATTGCTGCTCAA
ACCATAGTGCGGGGAATGAGTCCTGAGGCGGTGCCCTCGCCTGCAGCTGT
GTCGACATGGGAAGAAGCCTCGACCTTGCCGTCTCTGAAACGAGGAGGAG
GAGGACGGGGAGGGAAAGGGGGACCGGGAAAAGGAAGCAGAAACAGGAGC
CGGGGGTTATGGGCCGCAGCTGTGACATGGGAGGGAAGGAAGGTAAATCC
ATATGTACCTGGAGCAGTTGCTCCTCCTTTTGATTCAGCTCTGGCGACGC
TCCTCCATCAAGACCTCCCCCGCGCCCTCCTCCTCGCCCCCTGGCGTCAG
CAACACCAATCCCAGCCAGTGGAAACCACCTACTCCCTCGATTGCCCTCC
TACTTCCTCCTTCCCCCACTCCTCTGGCTCAAGAGGCTTGGCCGTCTGTG
CCAATCGCACCTACATGGGTAGCACTATTGGCAAAGTATTAAAAAGAGCA
GAGGAGATGTCGGCGCATGGTGCCTACCTTCACTGGTACAGCCGCCATGG
AATTGAAGAAGCAGATTTTGCCGTTGCCTTTGAACAGCTCCGGAGAATGA
AGGAAGAGTACGAGGAATGGGGGAGGGGCGCAGAGCAGGGTAGGAGGCAG
GGAGCGATTATAGGTTGATTTGTCGAGAAGGAAATGGGAAAAAGTTACAC
GGAAGCAAAATCTTCAACGATATGTGCTACTACTGCTATTCTCGTATTTG
TGTACTCTGCTCTCTAGTACTTCGTCCCTCACAAGTATTTCGGTAAATAG
ACATTCTGGTTCACGTGCGCACGTTAGCAAGGCAGGATGGACGGGCAGGC
AGAAGAAGATGTAATCGAAGGTAGCACCATGTGATGGAAATCGTTTGCTG
TTGCGTCAAGAAATAGCAGCGTGATGGGGGAGATGTGCCTTGAGATTGGA
ACATGAACACATACATGCTCAAGCAACGTGTCAATTTTCAAGGAGGTTGG
ACAAACATGTTGCTTGTGACGGTGGGAAAATAACAAGCAGAAGAAGCAGT
CTACTATGCGCCCGCGCGTGCTCAGGATACAGCCACCTGGTGCTTTTGTT
GTGTCCCATGCGTTTTCATGCGTCTGTGGGAGAATGAAGCAGTGGATTGA
AGAAGGGTGATGGTGTTTTC
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protein sequence of NO15G02680.1

>NO15G02680.1-protein ID=NO15G02680.1-protein|Name=NO15G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=583bp
MASTTLHVHVGQCGNQVGERFWSLAATDASSGASAVDSDEAAAIPSGSRP
HPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDACITDSSGRAN
NWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGT
GSGVGSALLQYLREACPALTITTSSVGPFSSGDCATQWYNTAFSLSALTE
YADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMG
TINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYA
KFVDVRSSWSMSSSLPSPSSSCRAAAKSGQHQLVARGGEEEGSRGWGEDW
SSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEA
STLPSLKRGGGGRGGKGGPGKGSRNRSRGLWAAAVTWEGRKVNPYVPGAV
APPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPH
SSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADF
AVAFEQLRRMKEEYEEWGRGAEQGRRQGAIIG*
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Synonyms
Publications