NO15G02680, NO15G02680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02680 vs. NCBI_GenBank
Match: EWM22340.1 (cryptic tubulin [Nannochloropsis gaditana]) HSP 1 Score: 539.3 bits (1388), Expect = 1.500e-149 Identity = 308/587 (52.47%), Postives = 386/587 (65.76%), Query Frame = 0 Query: 1 MASTTLHVHVGQCGNQVGERFWSLAATDASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDACITDSSGRANNWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGPFSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSR-MPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSSWSMS--SSLPSPSSSCRAAAKSGQHQLVARGGEEEGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPT--------SSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGRGAEQGRR 577 M S TLHVH+GQCGNQ+GE+FWSLAA D A+A D+ +A++ S PHP+FHE D +A AVFVDSEAKVVDRLR+N L+ V+RK+ACITDSSGRANNWAMGFT+SC+EL + GLFY TVN LRRELER+D LQS+VI+HSLAGGTGSGVGSAL QYLREACP++ ITT SVGPFS+GDCATQWYN+ F+L+AL+E+AD VLYRDND L +L + AA +G G R M G G A A + ASMG +N+SLA DLAC+ FPT+TS S+ + G Y+ WDA L C PF YAKFVD RSSWS S ++LP+ S S +AAA G H L G W ++ LG+ ++A+ P +D +G+ NVT+AAQ VRG+ +P +E +L RG G N + + NPY+P P+ L LH DLPRAL L WR Q P+ T +S P+ ++ P SS S G+A+CANRT+M ST+ KVL RAEEM+ H AYLHW+ RHGIE+ DF AFE LRR+KEEY+E G G+++ R Sbjct: 1 MVSATLHVHIGQCGNQIGEQFWSLAADDF---AAAADNGDASSF-SPQYPHPLFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSTFTLNALSEHADTVLYRDNDQLLGEYLRVAGAA---EGTGRRGMSGGRGLALATSKASMGRLNESLAADLACLLFPTVTSPSIPTCG-GGGYRAWDALALQHDCTPFKYAKFVDNRSSWSTSTATTLPTSSVSFKAAAGHGLHHLPDGRLGGAGGGQWADECVYLGKDVIASFPTEDGRGKANVTLAAQMTVRGVD---LPGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRDSNRNHQK----------PQTSNPYLP---PTPWHPGLTAFLHHDLPRALRLPSWR---QGSPIGTVFSSHSQPSILPCTSMPAARPFSSSSPGVAICANRTHMSSTVEKVLGRAEEMAEHRAYLHWFHRHGIEDDDFTAAFEGLRRVKEEYDELGSGSDRALR 560
BLAST of NO15G02680 vs. NCBI_GenBank
Match: XP_005854116.1 (beta-tubulin, partial [Nannochloropsis gaditana CCMP526] >EKU22245.1 beta-tubulin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 177.9 bits (450), Expect = 8.800e-41 Identity = 86/110 (78.18%), Postives = 98/110 (89.09%), Query Frame = 0 Query: 68 SEAKVVDRLRQNPCLSGVIRKDACITDSSGRANNWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVG 178 SEAKVVDRLR+N L+ V+RK+ACITDSSGRANNWAMGFT+SC+EL + GLFY TVN LRRELER+D LQS+VI+HSLAGGTGSGVGSAL QYLREACP++ ITT SVG Sbjct: 1 SEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQSRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGSGVGSALFQYLREACPSVNITTCSVG 110
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETL45946.1 (hypothetical protein L916_04077 [Phytophthora parasitica] >ETP50237.1 hypothetical protein F442_04233 [Phytophthora parasitica P10297] >KUF85870.1 Tubulin delta chain [Phytophthora nicotianae] >KUF91037.1 Dual specificity protein phosphatase 1B [Phytophthora nicotianae]) HSP 1 Score: 164.1 bits (414), Expect = 1.300e-36 Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSS-W------SMSSSLPSPSSSCRAAAKS--------GQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LAA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS W S LP S + + S Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: KUG00955.1 (Tubulin delta chain [Phytophthora nicotianae]) HSP 1 Score: 164.1 bits (414), Expect = 1.300e-36 Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSS-W------SMSSSLPSPSSSCRAAAKS--------GQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LAA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS W S LP S + + S Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADXDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETI52650.1 (hypothetical protein F443_04266 [Phytophthora parasitica P1569]) HSP 1 Score: 163.3 bits (412), Expect = 2.200e-36 Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSS-W------SMSSSLPSPSSSCRAAAKS--------GQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LAA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS W S LP S + + S Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGILE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETK92539.1 (hypothetical protein L915_04123 [Phytophthora parasitica]) HSP 1 Score: 163.3 bits (412), Expect = 2.200e-36 Identity = 169/617 (27.39%), Postives = 250/617 (40.52%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LAA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS S + S P P SS+ A Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: XP_008901460.1 (hypothetical protein PPTG_08269 [Phytophthora parasitica INRA-310] >ETL99105.1 hypothetical protein L917_03978 [Phytophthora parasitica] >ETM52255.1 hypothetical protein L914_04089 [Phytophthora parasitica] >ETN13439.1 hypothetical protein PPTG_08269 [Phytophthora parasitica INRA-310]) HSP 1 Score: 161.8 bits (408), Expect = 6.500e-36 Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS S + S P P SS+ A Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETO81292.1 (hypothetical protein F444_04322 [Phytophthora parasitica P1976]) HSP 1 Score: 161.8 bits (408), Expect = 6.500e-36 Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS S + S P P SS+ A Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGDTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADVDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: ETP22357.1 (hypothetical protein F441_04214 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 161.8 bits (408), Expect = 6.500e-36 Identity = 168/617 (27.23%), Postives = 249/617 (40.36%), Query Frame = 0 Query: 5 TLHVHVGQCGNQVGERFWSLAATD---------------------ASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDA-CITDSSGRANNWAMGF----------TASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGP-FSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRS--------SWSMSSSLPSP-------SSSCRAAAKSGQHQLVARGGEE----EGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWGR 570 ++H+HVGQCGNQ+G +W LA AS G+++ + A+ S P P+FH A + VDSE KVV Q + A + +GR NNWAMG+ T + + L +++L+RE+ERVD Q V+ HSL GGTGSG+G +L+ +R+ P I T+SV P +SGD Q YN +L L + ADAV+Y+DND L A G + S+ +N A DLA + FP T + + F + +L CP AK ++VRS S + S P P SS+ A Q ++++R E + S G E L ++ A+ PR TIA+ T++RG +P V +E A F L ++ P LA Q V +YS P +S +S + +C N + ++ + L+RA+ GAY+HWY +HG+E+ADF AF++ + EYE + R Sbjct: 2 SVHLHVGQCGNQLGAAYWRLATASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAV---SLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVHERVGTDN-----------YQRVSLEEVNSMAAADLAGLLFPVATGDASTVRRF-------NFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKFPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGMLE---KLVQQTTASFPRNS-----RTTIASSTVIRGFNP-------------------------------------------------VAYE------------ADRFTEKLGKVVQTAFPPVPWLANMPQ------VTLSYSKPAPFSSLQVQAS----VTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of NO15G02680 vs. NCBI_GenBank
Match: XP_008123176.1 (PREDICTED: tubulin beta chain, nucleomorph, partial [Anolis carolinensis]) HSP 1 Score: 154.8 bits (390), Expect = 8.000e-34 Identity = 161/558 (28.85%), Postives = 215/558 (38.53%), Query Frame = 0 Query: 11 GQCGNQVGERFWSLAATDASSGASAVDSDEAAAIPSGSRPHPMFHEVDSKAVAVFVDSEAKVVDRLRQNPCLSGVIRKDACITDSSGRANNWAMGFTASCQELRKGHGLFYKTVNTLRRELERVDRLQSVVIHHSLAGGTGSGVGSALLQYLREACPALTITTSSVGPFSSGDCATQWYNTAFSLSALTEYADAVLYRDNDISLSHHLMTSAAASHGKGNGSRMPAGWGHAAAIATASMGTINDSLATDLACVFFPTITSSSLSSSSFMGCYQPWDARQLSRSCCPFTYAKFVDVRSSWSMSSSLPSPSSSCRAAAKSGQHQLVARGGEEEGSRGWGEDWSSLGRKLVATLPRKDLKGRPNVTIAAQTIVRGMSPEAVPSPAAVSTWEEASTLPSLKRGGGXXXXXXXXXXXXXNRSRGLWAAAVTWEGRKVNPYVPGAVAPPFDSALATLLHQDLPRALLLAPWRQQHQSQPVETTYSLDCPPTSSFPHSSGSRGLAVCANRTYMGSTIGKVLKRAEEMSAHGAYLHWYSRHGIEEADFAVAFEQLRRMKEEYEEWG 569 GQCGNQ+G+ +W + A + EA A P GS +D + A+ VDSE KVV RL Q R+ I +GR NNWA G+ S E LF +T+ +LR+E+ER D V+ HSL+GGTG+G+ S L + +RE P I + SV P SG+ + Q YN LS L +AD VL ND L TS G A S +N +A+ LA +F+P ++ S S +PW +L RS CP KF+ + SS+C + W L +V LPR+ G P+ + A + RG +E S L +NP DS L + L +A PW P TTY D P L VCAN + I +V A M A+LHWY RHG E+ F AFE LR + E+Y G Sbjct: 1 GQCGNQIGQEWWQIIA----------NQGEADASPFGS--------LDGRLSAICVDSEPKVVRRL-QKQIRRKAFRESNLIVGKAGRGNNWAYGYHGSKGE----RDLFSQTMESLRKEVERKDCYCGTVLLHSLSGGTGAGLSSRLCEAIREEYPLGRILSVSVAPHQSGEGSLQPYNALLCLSWLQRFADGVLLFQNDEVLKR--ATSLQPKEGDN-------------AYGQVSFSAMNAYIASCLAGLFYPLKVFTTRSGISL--GQEPW---ELLRSVCPMPTLKFLHT-----------AQSSTCGSV-----------------------HWDRLASSVVQPLPRESPDGNPHCSTALLAMARGP--------------QEHSFL--------------------------------------LNP----------DSVL-----RRLKQAYRCVPW------NPFPTTYWTDPSSGLVAPVGRHHHTLTVCANHSSAADFIQRVAHGAHAMYESRAFLHWYRRHGCEDGHFGEAFETLRSVVEDYHHLG 408 The following BLAST results are available for this feature:
BLAST of NO15G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02680 ID=NO15G02680|Name=NO15G02680|organism=Nannochloropsis oceanica|type=gene|length=2370bpback to top protein sequence of NO15G02680.1 >NO15G02680.1-protein ID=NO15G02680.1-protein|Name=NO15G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=583bpback to top Synonyms
Publications
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