NO15G02180, NO15G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02180 vs. NCBI_GenBank
Match: XP_005854991.1 (tesmin tso1-like cxc domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21367.1 tesmin tso1-like cxc domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 288.9 bits (738), Expect = 5.100e-74 Identity = 164/278 (58.99%), Postives = 182/278 (65.47%), Query Frame = 0 Query: 157 GASVGALPQP-----PHSISTSVSSNRVV-DIKQNWEDQQAHA-ITMATSTTANAVQAT--SAGPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPSLPPALA-----------MPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQVAGQNPALATPQPHM 415 GA GA P P P IS+++S + + W+ QQ A + A + A AT SA PL SLPP+ + Y T MDG+APGCNCKRSRCLKLYCQCFAAQA CI +CNCQ CLN NH+RAEAIRQI+ERNPNAFQTKFRP+GEDAVHK+GCKCRKSACLKKYCECFNAGARCSDKCSC+ CQNVAG+GRPYEEAVMAARRGATAARQAAQ GQNPALATPQPHM Sbjct: 102 GAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQV--------ASLPPSTSXXXXXXXXXXXXAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHM 371
BLAST of NO15G02180 vs. NCBI_GenBank
Match: EWM22379.1 (tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 288.9 bits (738), Expect = 5.100e-74 Identity = 164/278 (58.99%), Postives = 182/278 (65.47%), Query Frame = 0 Query: 157 GASVGALPQP-----PHSISTSVSSNRVV-DIKQNWEDQQAHA-ITMATSTTANAVQAT--SAGPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPSLPPALA-----------MPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQVAGQNPALATPQPHM 415 GA GA P P P IS+++S + + W+ QQ A + A + A AT SA PL SLPP+ + Y T MDG+APGCNCKRSRCLKLYCQCFAAQA CI +CNCQ CLN NH+RAEAIRQI+ERNPNAFQTKFRP+GEDAVHK+GCKCRKSACLKKYCECFNAGARCSDKCSC+ CQNVAG+GRPYEEAVMAARRGATAARQAAQ GQNPALATPQPHM Sbjct: 264 GAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQV--------ASLPPSTSXXXXXXXXXXXXAYGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHM 533
BLAST of NO15G02180 vs. NCBI_GenBank
Match: CBN80299.2 (TSO1; transcription factor (Partial) [Ectocarpus siliculosus]) HSP 1 Score: 150.2 bits (378), Expect = 2.800e-32 Identity = 71/125 (56.80%), Postives = 84/125 (67.20%), Query Frame = 0 Query: 267 GCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFR-PDGEDA-VHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARR 390 GCNCKRS+CLKLYCQCFA Q C ++CNC C N +R +AI ++ERNP AF KFR + DA VHK GCKCRKSACLKKYCECFN G CS+KC+C+ C+N + Y AA R Sbjct: 25 GCNCKRSKCLKLYCQCFAMQVVCTASCNCHHCYNNANQESMRLQAINGVLERNPAAFDAKFRETEKHDAVVHKTGCKCRKSACLKKYCECFNKGVACSEKCNCVGCRNTVALYSEYRGGGAAAER 149
BLAST of NO15G02180 vs. NCBI_GenBank
Match: GAX21773.1 (hypothetical protein FisN_31Lh062 [Fistulifera solaris]) HSP 1 Score: 134.4 bits (337), Expect = 1.600e-27 Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0 Query: 267 GCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDG----------EDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQN 373 GC CK++RCLKLYCQCF A+ C + C C C N+ A R EAI+ I+ RNP+AF +KF+ DG + HKLGCKCRKS+C+KKYCEC+ RCS C CINC+N Sbjct: 217 GCTCKKTRCLKLYCQCFQAELYCGTNCRCLSCYNVVAEEAKRKEAIQSILLRNPSAFDSKFKKDGVTERSAHELARELAHKLGCKCRKSSCMKKYCECYAGNVRCSSNCRCINCKN 332
BLAST of NO15G02180 vs. NCBI_GenBank
Match: OQR95270.1 (hypothetical protein ACHHYP_00152 [Achlya hypogyna]) HSP 1 Score: 133.3 bits (334), Expect = 3.600e-27 Identity = 71/173 (41.04%), Postives = 93/173 (53.76%), Query Frame = 0 Query: 244 PSLPPALAMPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFR-----PDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQVAGQNPALATPQ 412 P++P A+A P P + CNCK+S+CLKLYC+CFA+ C +C C GC N PA +R+EAI +ERNPNAF+ K G VH GC C+KS C KKYCECF AG C + C CI+C+N G + + + A + + LATPQ Sbjct: 351 PTVPVAVAPPAPPPVAPIVKKRNPCNCKKSKCLKLYCECFASGGFCDESCKCIGCANTPAAEPVRSEAIALTLERNPNAFKPKINNLHVVTTGPQLVHHNGCHCKKSFCQKKYCECFQAGVPCGENCKCIDCKNQPGSCQTHSKPA-----------SAKHASHKTRTLATPQ 512
BLAST of NO15G02180 vs. NCBI_GenBank
Match: XP_008608780.1 (hypothetical protein SDRG_04870 [Saprolegnia diclina VS20] >EQC37847.1 hypothetical protein SDRG_04870 [Saprolegnia diclina VS20]) HSP 1 Score: 132.1 bits (331), Expect = 8.000e-27 Identity = 66/148 (44.59%), Postives = 84/148 (56.76%), Query Frame = 0 Query: 268 CNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQN--------VAGIGRPYEEAVMAARRGATAARQAAQVAGQNPAL 408 CNCK+S+CLKLYC+CFA+ C +C C GC N PA +R EAI +ERNPNAF+ K + + +H GC C+KS C KKYCECF AG C D C CI+C+N AG +AV A R TA + + A+ Sbjct: 353 CNCKKSKCLKLYCECFASGGFCDESCKCVGCANTPASEPLRTEAITLTLERNPNAFRPKIKKEETTPIHHNGCHCKKSFCQKKYCECFQAGVPCGDNCKCIDCKNQPGGCAQHTAGRSAAKHKAVPALLRHVTAPKPGTNMVRTTSAV 500
BLAST of NO15G02180 vs. NCBI_GenBank
Match: XP_012202852.1 (hypothetical protein SPRG_08218 [Saprolegnia parasitica CBS 223.65] >KDO26415.1 hypothetical protein SPRG_08218 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 129.8 bits (325), Expect = 4.000e-26 Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = 0 Query: 268 CNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPD-GEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAG 376 CNCK+S+CLKLYC+CFA+ C +C C GC N P+ +R +AI +ERNPNAFQ K + + H GC C+KS C KKYCECF AG C D C CI+C+N G Sbjct: 345 CNCKKSKCLKLYCECFASGGFCDESCKCVGCANTPSSEPLRTDAINATLERNPNAFQPKIKKEVAATPTHHNGCHCKKSFCQKKYCECFQAGVPCGDNCKCIDCKNQPG 453
BLAST of NO15G02180 vs. NCBI_GenBank
Match: GAX10854.1 (hypothetical protein FisN_31Hh062 [Fistulifera solaris]) HSP 1 Score: 129.8 bits (325), Expect = 4.000e-26 Identity = 71/155 (45.81%), Postives = 89/155 (57.42%), Query Frame = 0 Query: 267 GCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPD------GEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQN-----VAGIGRPYEEAVMAARRG----ATAARQAAQVAGQNPA 407 GC CK++RCLKLYCQCF A+ C S C C C N+ A + R EAI+ I+ RNP+AF +KF+ D + HKLGCKCRKS+C+KKYCEC+ +CS C CINC+N G G P + + G AR Q A QN A Sbjct: 189 GCTCKKTRCLKLYCQCFQAELYCGSNCRCLNCYNVVAEDAKRKEAIQSILLRNPSAFDSKFKKDAATERAARELAHKLGCKCRKSSCMKKYCECYAGNVKCSANCRCINCKNRGTGGNTGKGPPPPFHAVPSTAGPFVTGPPARSGEQCAAQNLA 343
BLAST of NO15G02180 vs. NCBI_GenBank
Match: CBJ30741.1 (tesmin-like, animal TCX proteins are associated with development of both male and female reproductiv [Ectocarpus siliculosus]) HSP 1 Score: 127.9 bits (320), Expect = 1.500e-25 Identity = 58/114 (50.88%), Postives = 71/114 (62.28%), Query Frame = 0 Query: 262 DGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAG 376 D ++ CNCK+S+CLKLYC+CF Q C + CNC CLN +R AI+ +ERNP AF +KF H GC C+KSACLKKYCECF AG C C C+NC+N G Sbjct: 434 DPLSVTCNCKKSKCLKLYCECFQRQQYC-NGCNCVECLNTERTEDLRQLAIQGTIERNPQAFVSKFERRAGKRSHNAGCNCKKSACLKKYCECFQAGVACGTNCKCVNCKNYEG 546
BLAST of NO15G02180 vs. NCBI_GenBank
Match: XP_005848925.1 (hypothetical protein CHLNCDRAFT_144374 [Chlorella variabilis] >EFN56823.1 hypothetical protein CHLNCDRAFT_144374 [Chlorella variabilis]) HSP 1 Score: 125.9 bits (315), Expect = 5.700e-25 Identity = 59/113 (52.21%), Postives = 71/113 (62.83%), Query Frame = 0 Query: 268 CNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGED-----AVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAG 376 CNCK SRCLKLYC+CFA+ C CNC C N H R A+ I+ERNPNAF+ K P ++ A H GC C+KS CLKKYCECF AG CS+ C C++C+N G Sbjct: 156 CNCKNSRCLKLYCECFASGRYC-DGCNCLNCYNNREHEATRQSAVEAILERNPNAFRPKIAPGADNRRAGGARHNKGCNCKKSGCLKKYCECFQAGIVCSEICKCLDCKNYEG 267 The following BLAST results are available for this feature:
BLAST of NO15G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02180 ID=NO15G02180|Name=NO15G02180|organism=Nannochloropsis oceanica|type=gene|length=3242bpback to top protein sequence of NO15G02180.1 >NO15G02180.1-protein ID=NO15G02180.1-protein|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=838bpback to top Synonyms
Publications
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