NO15G02180.1, NO15G02180.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G02180.1
Unique Name	NO15G02180.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3242
Alignment location	chr15:610571..613812 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:610571..613812 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO15G02180.1 vs.
Match: EWM22379.1 (tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 503.8 bits (1296), Expect = 1.000e-138
Identity = 448/904 (49.56%), Postives = 510/904 (56.42%), Query Frame = 0

Query:   31 GPEPEPSSTATD-----------GADAAASPAAADVAT--GEGKQVEEAEAPVATERDNLSLKIKEEVAEADGKERKE--EGKGDVEQPPQQTPQPPS--SSPQRDENEVEDPEVASATKKEEEEKQGPLNN----NAPSAAIPSTAG--ASVGALPQP-----PHSISTSVSSNRVVD-IKQNWEDQQAHA-ITMATSTTANAVQAT--SAGPLSDDRGGGGGGGEGGGEASPASSAGLQQAAQ----PSLPPALAMPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQVAGQNPALATPQPHMMASMVAAALRQQQPYHQLI--------GGGAIKEEGVGGRGLGGGSPAHKRKRSGSSGEVGVGGEGGGEGGGDEQHQLHRPPIMSPISTGLRASPSQQQQQQTPAAAAAAAAAAAAAAQAQEFASQGLFGIPG--------HPGFLPFLPPGQPA--AFYEQQAALMASQTLQQQQQQ---------LEFIQRQQ-QAQFQLFQQQYQQQQQQNQRQHHQQAMQQSLSPTQLLLLQAQQQHQYFQQQQLHQQHQQQMQQQQQQQQQQQQRQQAGRGGGRGG------GKKSAEASGGDDLEEMVQAAEDLAFLKGSSGPGSKGHAEVEAQLNQANHQQQQQAALQ------------QQQLMAAAVALASAQGGGGGGGEGGGGGGGGGRPEQQLYAQQ--FMGHPAFAAMAMQQQ------LDPAQA---AAVYAQMQQQMQEQQKQQQQQQQQQVGGGRGGGGGGEGGEG----GLGQHESV 838
            GP P+P     +           GA     P A  +    G G+Q EEAEA    +R     +  +  +EA    R+E  E +G+  QP  Q  + P   +    DEN+VED EVA ATKKE+    GP ++    +    A+  + G  A  GA P P     P  IS+++S    +  +   W+ QQ  A +  A   +  A  AT  SA PL    GG     E G    P+  A L  +      PS PP L   Y    T MDG+APGCNCKRSRCLKLYCQCFAAQA CI +CNCQ CLN    NH+RAEAIRQI+ERNPNAFQTKFRP+GEDAVHK+GCKCRKSACLKKYCECFNAGARCSDKCSC+ CQNVAG+GRPYEEAVMAARRGATAARQAAQ  GQNPALATPQPHMMASMVAAALRQQQ    L         GGG +KE G GG   GG SP+ KR+RSGSSG   V   G  +G  D+Q       +MSP  T  R SP Q    Q               A   +F++QGLF +P         HPG LPF  PGQP    F+EQ A L+ASQ LQQ QQQ         LEFIQRQQ QAQ Q FQQ   QQQQQ Q+Q  Q  + QSLSPTQLLLLQAQQQ Q  QQQQ                        AG GGG GG      GKKS+E SGGDDL+EMVQAAEDLAFLKGSSGPGSK HAEVEAQ  QA  QQQQQ   Q            QQ  MA A A A++ GGGGGGG GGG GGG     Q  + QQ  F G+P  +     QQ      LDPAQA   AA+YAQMQQ                      GGGGGE  +G    G GQHE+V
Sbjct:  119 GPRPQPEPARPEEREDGQRQVEYGASKMEKPPAQGLPQLDGGGQQEEEAEARPDDQRAPFQ-EPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKED---MGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPA-YGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGG---GGSSPSSKRRRSGSSG--AVPALGSNQGLADQQMPFFHRSLMSPTPTSQRTSPLQGHPAQ---------------AGQPDFSAQGLFSLPPGLQPHHSPHPGLLPFFSPGQPVPPGFFEQHA-LLASQNLQQHQQQQQHQQHQQQLEFIQRQQAQAQAQFFQQLAAQQQQQ-QQQMQQHPLHQSLSPTQLLLLQAQQQQQLLQQQQA-----------------------AGGGGGAGGRGQGKSGKKSSEVSGGDDLQEMVQAAEDLAFLKGSSGPGSKNHAEVEAQFAQAQQQQQQQQGAQQPQPPQDQTQQPQQHYMAFAAAAAASGGGGGGGGAGGGAGGGRPGQGQPFFGQQVAFPGNPFLSGSVPSQQLVAPQFLDPAQAAHMAAMYAQMQQFQ--------------------GGGGGEVADGKKSPGAGQHETV 952

The following BLAST results are available for this feature:

BLAST of NO15G02180.1 vs.

BLAST of NO15G02180.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22379.1	1.000e-138	49.56	tesmin tso1-like cxc domain-containing protein [Na...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G02180	NO15G02180	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02180.1	NO15G02180.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G02180.1.cds1	NO15G02180.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:610571..613812+
coding sequence from alignment at chr15:610571..613812+

mRNA sequence

>NO15G02180.1 ID=NO15G02180.1|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=3242bp
AACAGGACAATTGACATCGCGTTTTCCTTTTTGGTGCCGACCCCAGGGAA
AAATCCAATCCCCAAATCATCACCAGCATCACATCCTACGATTGAAAACC
AAAAGCTAAGCCACGACAAACATGTCGGAGGTCGAGACCATGCCCATGTC
GTCCAGCACAATAGAGGGACAAGATCAGCAACAACAGTGCGAGCACATGA
AAGGTAGTGCTGGCCCCGAGCCGGAGCCGTCGTCGACAGCCACCGATGGC
GCGGATGCTGCTGCTTCTCCTGCTGCTGCCGATGTTGCGACGGGCGAGGG
AAAGCAAGTCGAGGAGGCGGAGGCCCCCGTCGCCACGGAGCGTGATAATC
TGTCACTGAAAATCAAGGAGGAAGTGGCCGAGGCAGACGGCAAGGAGCGC
AAAGAGGAAGGAAAGGGCGATGTAGAGCAACCACCACAACAGACACCGCA
GCCACCCTCTTCTTCCCCCCAACGCGACGAGAACGAAGTCGAGGACCCAG
AAGTAGCCAGCGCCACGAAGAAGGAAGAAGAAGAGAAGCAGGGCCCTCTA
AACAACAACGCTCCCTCCGCGGCTATCCCTTCGACAGCAGGCGCCAGCGT
GGGGGCCTTGCCGCAACCTCCTCACTCAATCAGCACGTCGGTCAGCAGCA
ACAGGGTGGTGGATATAAAACAAAATTGGGAAGACCAACAAGCCCACGCA
ATAACTATGGCCACCTCTACCACCGCTAATGCGGTCCAAGCCACGAGTGC
GGGCCCTCTCTCCGATGACCGAGGAGGGGGAGGAGGAGGCGGGGAAGGGG
GAGGAGAAGCGTCTCCTGCCTCCTCCGCTGGCCTGCAGCAAGCCGCTCAA
CCATCCTTGCCTCCCGCCCTGGCCATGCCCTACCTTCCTCAGTTTACCGA
GATGGATGGGATGGCCCCTGGGTGTAATTGCAAGCGAAGCCGATGCCTTA
AGCTCTACTGTCAATGTTTCGCCGCCCAAGCCTGTTGTATCTCGGCGTGC
AACTGCCAAGGCTGCCTGAACCTGCCAGCACACAACCACATCCGCGCGGA
GGCCATCCGCCAAATCGTGGAACGGAATCCCAATGCCTTTCAGACCAAGT
TTCGCCCCGATGGCGAAGACGCCGTCCACAAGCTCGGCTGCAAATGTCGG
AAATCCGCGTGTCTGAAAAAGTACTGCGAATGCTTCAATGCGGGCGCCCG
CTGCTCCGACAAGTGCTCCTGTATCAACTGCCAGAATGTAGCTGGCATTG
GTCGTCCCTACGAAGAAGCAGTGATGGCTGCCCGTCGGGGAGCAACAGCG
GCAAGACAAGCAGCCCAAGTGGCAGGACAGAACCCGGCCTTGGCTACACC
GCAACCGCACATGATGGCCTCCATGGTAGCGGCGGCCCTGCGGCAGCAGC
AGCCATACCACCAGCTGATTGGAGGTGGAGCGATAAAAGAGGAAGGTGTT
GGGGGAAGAGGCTTGGGGGGGGGGTCGCCGGCGCACAAGAGAAAGAGGAG
CGGGAGTAGTGGGGAGGTAGGGGTGGGAGGAGAAGGAGGAGGAGAAGGCG
GAGGGGATGAGCAACACCAGCTCCATCGTCCCCCCATTATGTCCCCTATC
TCCACAGGACTACGTGCTTCTCCTTCGCAGCAACAGCAGCAACAAACACC
AGCAGCCGCGGCTGCCGCAGCAGCGGCAGCCGCGGCTGCGGCGCAAGCAC
AGGAGTTTGCGAGTCAGGGCTTGTTCGGGATTCCTGGGCACCCTGGCTTC
CTTCCCTTCCTCCCCCCCGGCCAACCAGCGGCTTTCTACGAGCAACAGGC
CGCGCTTATGGCATCGCAAACATTGCAGCAGCAGCAGCAACAGCTGGAGT
TCATCCAGCGGCAGCAGCAAGCTCAATTTCAGTTGTTCCAGCAGCAGTAC
CAGCAGCAGCAGCAGCAGAACCAGCGGCAGCACCACCAGCAGGCTATGCA
GCAGTCTTTGTCCCCTACCCAGCTCCTACTCCTCCAGGCACAGCAACAAC
ACCAATATTTCCAGCAGCAGCAGTTGCATCAGCAGCATCAACAGCAAATG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACGGCAACAGGCAGG
AAGGGGAGGAGGGAGGGGGGGAGGGAAAAAGTCCGCCGAGGCGTCAGGAG
GGGACGACCTTGAAGAGATGGTGCAAGCAGCGGAAGACTTGGCATTCTTG
AAAGGGTCGAGTGGTCCGGGAAGTAAAGGCCATGCAGAAGTGGAGGCACA
ACTCAACCAAGCCAACCACCAGCAGCAGCAACAGGCAGCGCTGCAGCAAC
AACAACTCATGGCCGCAGCGGTCGCGCTGGCCTCGGCGCAAGGCGGTGGC
GGAGGGGGAGGAGAAGGAGGAGGAGGAGGAGGGGGAGGAGGAAGGCCGGA
ACAGCAACTTTATGCGCAGCAGTTCATGGGACATCCGGCTTTTGCTGCTA
TGGCCATGCAGCAACAGCTGGATCCCGCTCAGGCGGCGGCAGTTTATGCA
CAAATGCAGCAGCAGATGCAGGAACAGCAGAAACAGCAGCAACAGCAACA
ACAACAACAAGTTGGTGGTGGAAGAGGAGGAGGAGGAGGAGGAGAGGGAG
GGGAGGGAGGATTAGGACAGCATGAGTCGGTGTGACGGAGGAGGGATGAA
AGGATGTAGAGAGGGATGGAGAGCAAGAATGAATGACGAGTATTGTTTTC
AAAGAGGTAGGTCGGAGACATAGAGCAAAGCTCGGTCCCACAGAAGGCGA
AACGGGAGGGAGGAAAGTTTAAAGAGGGCTCGGCGGCGTCGGTCGTGCAG
GGAGGGGATAAGGAGTCAAAATGGAAAGCCTGGAGAAACGCCAAGAAATA
AAGTCCTTTGAGACGATGAGGACGAGAAAGGCAGAGGCGAGTCGTTTAAA
CTGACATGAAGACTTTTTAAAGAGCAAAAGAGAAGAATTTTTCATGAGTA
GCGATTGTAGCAGCAGCAGGATGCAGCGGCAGCAGCAGCATTAATACAAA
GGAATACATACGAGCTTTATACCTTGAAATTAGCGCTGTAATCTCCTTCC
TTCCCCCACATGCGGCCGTCCTTTTTTCCTTTCTTTAACTTAAGGGGCTC
AAGCGCAGGCAAGAAATGTGTCGGCGGTGAGTGCATCGAGGAAAAAAAAA
AGTAAGAAGGGGAAATGGTAGGCAAGGAAAGCACCACGAGACGATCCCCT
ACACCCACATCCATCCGTCTCAAAATAAAAGAACGCCAGGCA

protein sequence of NO15G02180.1

>NO15G02180.1-protein ID=NO15G02180.1-protein|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp
MSEVETMPMSSSTIEGQDQQQQCEHMKGSAGPEPEPSSTATDGADAAASP
AAADVATGEGKQVEEAEAPVATERDNLSLKIKEEVAEADGKERKEEGKGD
VEQPPQQTPQPPSSSPQRDENEVEDPEVASATKKEEEEKQGPLNNNAPSA
AIPSTAGASVGALPQPPHSISTSVSSNRVVDIKQNWEDQQAHAITMATST
TANAVQATSAGPLSDDRGGGGGGGEGGGEASPASSAGLQQAAQPSLPPAL
AMPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLN
LPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKK
YCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQV
AGQNPALATPQPHMMASMVAAALRQQQPYHQLIGGGAIKEEGVGGRGLGG
GSPAHKRKRSGSSGEVGVGGEGGGEGGGDEQHQLHRPPIMSPISTGLRAS
PSQQQQQQTPAAAAAAAAAAAAAAQAQEFASQGLFGIPGHPGFLPFLPPG
QPAAFYEQQAALMASQTLQQQQQQLEFIQRQQQAQFQLFQQQYQQQQQQN
QRQHHQQAMQQSLSPTQLLLLQAQQQHQYFQQQQLHQQHQQQMQQQQQQQ
QQQQQRQQAGRGGGRGGGKKSAEASGGDDLEEMVQAAEDLAFLKGSSGPG
SKGHAEVEAQLNQANHQQQQQAALQQQQLMAAAVALASAQGGGGGGGEGG
GGGGGGGRPEQQLYAQQFMGHPAFAAMAMQQQLDPAQAAAVYAQMQQQMQ
EQQKQQQQQQQQQVGGGRGGGGGGEGGEGGLGQHESV*

mRNA from alignment at chr15:610571..613812+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G02180.1 ID=NO15G02180.1|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=3242bp|location=Sequence derived from alignment at chr15:610571..613812+ (Nannochloropsis oceanica)
AACAGGACAATTGACATCGCGTTTTCCTTTTTGGTGCCGACCCCAGGGAA
AAATCCAATCCCCAAATCATCACCAGCATCACATCCTACGATTGAAAACC
AAAAGCTAAGCCACGACAAACATGTCGGAGGTCGAGACCATGCCCATGTC
GTCCAGCACAATAGAGGGACAAGATCAGCAACAACAGTGCGAGCACATGA
AAGGTAGTGCTGGCCCCGAGCCGGAGCCGTCGTCGACAGCCACCGATGGC
GCGGATGCTGCTGCTTCTCCTGCTGCTGCCGATGTTGCGACGGGCGAGGG
AAAGCAAGTCGAGGAGGCGGAGGCCCCCGTCGCCACGGAGCGTGATAATC
TGTCACTGAAAATCAAGGAGGAAGTGGCCGAGGCAGACGGCAAGGAGCGC
AAAGAGGAAGGAAAGGGCGATGTAGAGCAACCACCACAACAGACACCGCA
GCCACCCTCTTCTTCCCCCCAACGCGACGAGAACGAAGTCGAGGACCCAG
AAGTAGCCAGCGCCACGAAGAAGGAAGAAGAAGAGAAGCAGGGCCCTCTA
AACAACAACGCTCCCTCCGCGGCTATCCCTTCGACAGCAGGCGCCAGCGT
GGGGGCCTTGCCGCAACCTCCTCACTCAATCAGCACGTCGGTCAGCAGCA
ACAGGGTGGTGGATATAAAACAAAATTGGGAAGACCAACAAGCCCACGCA
ATAACTATGGCCACCTCTACCACCGCTAATGCGGTCCAAGCCACGAGTGC
GGGCCCTCTCTCCGATGACCGAGGAGGGGGAGGAGGAGGCGGGGAAGGGG
GAGGAGAAGCGTCTCCTGCCTCCTCCGCTGGCCTGCAGCAAGCCGCTCAA
CCATCCTTGCCTCCCGCCCTGGCCATGCCCTACCTTCCTCAGTTTACCGA
GATGGATGGGATGGCCCCTGGGTGTAATTGCAAGCGAAGCCGATGCCTTA
AGCTCTACTGTCAATGTTTCGCCGCCCAAGCCTGTTGTATCTCGGCGTGC
AACTGCCAAGGCTGCCTGAACCTGCCAGCACACAACCACATCCGCGCGGA
GGCCATCCGCCAAATCGTGGAACGGAATCCCAATGCCTTTCAGACCAAGT
TTCGCCCCGATGGCGAAGACGCCGTCCACAAGCTCGGCTGCAAATGTCGG
AAATCCGCGTGTCTGAAAAAGTACTGCGAATGCTTCAATGCGGGCGCCCG
CTGCTCCGACAAGTGCTCCTGTATCAACTGCCAGAATGTAGCTGGCATTG
GTCGTCCCTACGAAGAAGCAGTGATGGCTGCCCGTCGGGGAGCAACAGCG
GCAAGACAAGCAGCCCAAGTGGCAGGACAGAACCCGGCCTTGGCTACACC
GCAACCGCACATGATGGCCTCCATGGTAGCGGCGGCCCTGCGGCAGCAGC
AGCCATACCACCAGCTGATTGGAGGTGGAGCGATAAAAGAGGAAGGTGTT
GGGGGAAGAGGCTTGGGGGGGGGGTCGCCGGCGCACAAGAGAAAGAGGAG
CGGGAGTAGTGGGGAGGTAGGGGTGGGAGGAGAAGGAGGAGGAGAAGGCG
GAGGGGATGAGCAACACCAGCTCCATCGTCCCCCCATTATGTCCCCTATC
TCCACAGGACTACGTGCTTCTCCTTCGCAGCAACAGCAGCAACAAACACC
AGCAGCCGCGGCTGCCGCAGCAGCGGCAGCCGCGGCTGCGGCGCAAGCAC
AGGAGTTTGCGAGTCAGGGCTTGTTCGGGATTCCTGGGCACCCTGGCTTC
CTTCCCTTCCTCCCCCCCGGCCAACCAGCGGCTTTCTACGAGCAACAGGC
CGCGCTTATGGCATCGCAAACATTGCAGCAGCAGCAGCAACAGCTGGAGT
TCATCCAGCGGCAGCAGCAAGCTCAATTTCAGTTGTTCCAGCAGCAGTAC
CAGCAGCAGCAGCAGCAGAACCAGCGGCAGCACCACCAGCAGGCTATGCA
GCAGTCTTTGTCCCCTACCCAGCTCCTACTCCTCCAGGCACAGCAACAAC
ACCAATATTTCCAGCAGCAGCAGTTGCATCAGCAGCATCAACAGCAAATG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACGGCAACAGGCAGG
AAGGGGAGGAGGGAGGGGGGGAGGGAAAAAGTCCGCCGAGGCGTCAGGAG
GGGACGACCTTGAAGAGATGGTGCAAGCAGCGGAAGACTTGGCATTCTTG
AAAGGGTCGAGTGGTCCGGGAAGTAAAGGCCATGCAGAAGTGGAGGCACA
ACTCAACCAAGCCAACCACCAGCAGCAGCAACAGGCAGCGCTGCAGCAAC
AACAACTCATGGCCGCAGCGGTCGCGCTGGCCTCGGCGCAAGGCGGTGGC
GGAGGGGGAGGAGAAGGAGGAGGAGGAGGAGGGGGAGGAGGAAGGCCGGA
ACAGCAACTTTATGCGCAGCAGTTCATGGGACATCCGGCTTTTGCTGCTA
TGGCCATGCAGCAACAGCTGGATCCCGCTCAGGCGGCGGCAGTTTATGCA
CAAATGCAGCAGCAGATGCAGGAACAGCAGAAACAGCAGCAACAGCAACA
ACAACAACAAGTTGGTGGTGGAAGAGGAGGAGGAGGAGGAGGAGAGGGAG
GGGAGGGAGGATTAGGACAGCATGAGTCGGTGTGACGGAGGAGGGATGAA
AGGATGTAGAGAGGGATGGAGAGCAAGAATGAATGACGAGTATTGTTTTC
AAAGAGGTAGGTCGGAGACATAGAGCAAAGCTCGGTCCCACAGAAGGCGA
AACGGGAGGGAGGAAAGTTTAAAGAGGGCTCGGCGGCGTCGGTCGTGCAG
GGAGGGGATAAGGAGTCAAAATGGAAAGCCTGGAGAAACGCCAAGAAATA
AAGTCCTTTGAGACGATGAGGACGAGAAAGGCAGAGGCGAGTCGTTTAAA
CTGACATGAAGACTTTTTAAAGAGCAAAAGAGAAGAATTTTTCATGAGTA
GCGATTGTAGCAGCAGCAGGATGCAGCGGCAGCAGCAGCATTAATACAAA
GGAATACATACGAGCTTTATACCTTGAAATTAGCGCTGTAATCTCCTTCC
TTCCCCCACATGCGGCCGTCCTTTTTTCCTTTCTTTAACTTAAGGGGCTC
AAGCGCAGGCAAGAAATGTGTCGGCGGTGAGTGCATCGAGGAAAAAAAAA
AGTAAGAAGGGGAAATGGTAGGCAAGGAAAGCACCACGAGACGATCCCCT
ACACCCACATCCATCCGTCTCAAAATAAAAGAACGCCAGGCA

Coding sequence (CDS) from alignment at chr15:610571..613812+

>NO15G02180.1 ID=NO15G02180.1|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=CDS|length=2514bp|location=Sequence derived from alignment at chr15:610571..613812+ (Nannochloropsis oceanica)
ATGTCGGAGGTCGAGACCATGCCCATGTCGTCCAGCACAATAGAGGGACA
AGATCAGCAACAACAGTGCGAGCACATGAAAGGTAGTGCTGGCCCCGAGC
CGGAGCCGTCGTCGACAGCCACCGATGGCGCGGATGCTGCTGCTTCTCCT
GCTGCTGCCGATGTTGCGACGGGCGAGGGAAAGCAAGTCGAGGAGGCGGA
GGCCCCCGTCGCCACGGAGCGTGATAATCTGTCACTGAAAATCAAGGAGG
AAGTGGCCGAGGCAGACGGCAAGGAGCGCAAAGAGGAAGGAAAGGGCGAT
GTAGAGCAACCACCACAACAGACACCGCAGCCACCCTCTTCTTCCCCCCA
ACGCGACGAGAACGAAGTCGAGGACCCAGAAGTAGCCAGCGCCACGAAGA
AGGAAGAAGAAGAGAAGCAGGGCCCTCTAAACAACAACGCTCCCTCCGCG
GCTATCCCTTCGACAGCAGGCGCCAGCGTGGGGGCCTTGCCGCAACCTCC
TCACTCAATCAGCACGTCGGTCAGCAGCAACAGGGTGGTGGATATAAAAC
AAAATTGGGAAGACCAACAAGCCCACGCAATAACTATGGCCACCTCTACC
ACCGCTAATGCGGTCCAAGCCACGAGTGCGGGCCCTCTCTCCGATGACCG
AGGAGGGGGAGGAGGAGGCGGGGAAGGGGGAGGAGAAGCGTCTCCTGCCT
CCTCCGCTGGCCTGCAGCAAGCCGCTCAACCATCCTTGCCTCCCGCCCTG
GCCATGCCCTACCTTCCTCAGTTTACCGAGATGGATGGGATGGCCCCTGG
GTGTAATTGCAAGCGAAGCCGATGCCTTAAGCTCTACTGTCAATGTTTCG
CCGCCCAAGCCTGTTGTATCTCGGCGTGCAACTGCCAAGGCTGCCTGAAC
CTGCCAGCACACAACCACATCCGCGCGGAGGCCATCCGCCAAATCGTGGA
ACGGAATCCCAATGCCTTTCAGACCAAGTTTCGCCCCGATGGCGAAGACG
CCGTCCACAAGCTCGGCTGCAAATGTCGGAAATCCGCGTGTCTGAAAAAG
TACTGCGAATGCTTCAATGCGGGCGCCCGCTGCTCCGACAAGTGCTCCTG
TATCAACTGCCAGAATGTAGCTGGCATTGGTCGTCCCTACGAAGAAGCAG
TGATGGCTGCCCGTCGGGGAGCAACAGCGGCAAGACAAGCAGCCCAAGTG
GCAGGACAGAACCCGGCCTTGGCTACACCGCAACCGCACATGATGGCCTC
CATGGTAGCGGCGGCCCTGCGGCAGCAGCAGCCATACCACCAGCTGATTG
GAGGTGGAGCGATAAAAGAGGAAGGTGTTGGGGGAAGAGGCTTGGGGGGG
GGGTCGCCGGCGCACAAGAGAAAGAGGAGCGGGAGTAGTGGGGAGGTAGG
GGTGGGAGGAGAAGGAGGAGGAGAAGGCGGAGGGGATGAGCAACACCAGC
TCCATCGTCCCCCCATTATGTCCCCTATCTCCACAGGACTACGTGCTTCT
CCTTCGCAGCAACAGCAGCAACAAACACCAGCAGCCGCGGCTGCCGCAGC
AGCGGCAGCCGCGGCTGCGGCGCAAGCACAGGAGTTTGCGAGTCAGGGCT
TGTTCGGGATTCCTGGGCACCCTGGCTTCCTTCCCTTCCTCCCCCCCGGC
CAACCAGCGGCTTTCTACGAGCAACAGGCCGCGCTTATGGCATCGCAAAC
ATTGCAGCAGCAGCAGCAACAGCTGGAGTTCATCCAGCGGCAGCAGCAAG
CTCAATTTCAGTTGTTCCAGCAGCAGTACCAGCAGCAGCAGCAGCAGAAC
CAGCGGCAGCACCACCAGCAGGCTATGCAGCAGTCTTTGTCCCCTACCCA
GCTCCTACTCCTCCAGGCACAGCAACAACACCAATATTTCCAGCAGCAGC
AGTTGCATCAGCAGCATCAACAGCAAATGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAACAACGGCAACAGGCAGGAAGGGGAGGAGGGAGGGGGGG
AGGGAAAAAGTCCGCCGAGGCGTCAGGAGGGGACGACCTTGAAGAGATGG
TGCAAGCAGCGGAAGACTTGGCATTCTTGAAAGGGTCGAGTGGTCCGGGA
AGTAAAGGCCATGCAGAAGTGGAGGCACAACTCAACCAAGCCAACCACCA
GCAGCAGCAACAGGCAGCGCTGCAGCAACAACAACTCATGGCCGCAGCGG
TCGCGCTGGCCTCGGCGCAAGGCGGTGGCGGAGGGGGAGGAGAAGGAGGA
GGAGGAGGAGGGGGAGGAGGAAGGCCGGAACAGCAACTTTATGCGCAGCA
GTTCATGGGACATCCGGCTTTTGCTGCTATGGCCATGCAGCAACAGCTGG
ATCCCGCTCAGGCGGCGGCAGTTTATGCACAAATGCAGCAGCAGATGCAG
GAACAGCAGAAACAGCAGCAACAGCAACAACAACAACAAGTTGGTGGTGG
AAGAGGAGGAGGAGGAGGAGGAGAGGGAGGGGAGGGAGGATTAGGACAGC
ATGAGTCGGTGTGA

Synonyms

Publications