Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr15 genome chr15:610571..613812 +
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO15G02180.1 vs.
Match: EWM22379.1 (tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana])
HSP 1 Score: 503.8 bits (1296), Expect = 1.000e-138
Identity = 448/904 (49.56%), Postives = 510/904 (56.42%), Query Frame = 0
Query: 31 GPEPEPSSTATD-----------GADAAASPAAADVAT--GEGKQVEEAEAPVATERDNLSLKIKEEVAEADGKERKE--EGKGDVEQPPQQTPQPPS--SSPQRDENEVEDPEVASATKKEEEEKQGPLNN----NAPSAAIPSTAG--ASVGALPQP-----PHSISTSVSSNRVVD-IKQNWEDQQAHA-ITMATSTTANAVQAT--SAGPLSDDRGGGGGGGEGGGEASPASSAGLQQAAQ----PSLPPALAMPYLPQFTEMDGMAPGCNCKRSRCLKLYCQCFAAQACCISACNCQGCLNLPAHNHIRAEAIRQIVERNPNAFQTKFRPDGEDAVHKLGCKCRKSACLKKYCECFNAGARCSDKCSCINCQNVAGIGRPYEEAVMAARRGATAARQAAQVAGQNPALATPQPHMMASMVAAALRQQQPYHQLI--------GGGAIKEEGVGGRGLGGGSPAHKRKRSGSSGEVGVGGEGGGEGGGDEQHQLHRPPIMSPISTGLRASPSQQQQQQTPAAAAAAAAAAAAAAQAQEFASQGLFGIPG--------HPGFLPFLPPGQPA--AFYEQQAALMASQTLQQQQQQ---------LEFIQRQQ-QAQFQLFQQQYQQQQQQNQRQHHQQAMQQSLSPTQLLLLQAQQQHQYFQQQQLHQQHQQQMQQQQQQQQQQQQRQQAGRGGGRGG------GKKSAEASGGDDLEEMVQAAEDLAFLKGSSGPGSKGHAEVEAQLNQANHQQQQQAALQ------------QQQLMAAAVALASAQGGGGGGGEGGGGGGGGGRPEQQLYAQQ--FMGHPAFAAMAMQQQ------LDPAQA---AAVYAQMQQQMQEQQKQQQQQQQQQVGGGRGGGGGGEGGEG----GLGQHESV 838
GP P+P + GA P A + G G+Q EEAEA +R + + +EA R+E E +G+ QP Q + P + DEN+VED EVA ATKKE+ GP ++ + A+ + G A GA P P P IS+++S + + W+ QQ A + A + A AT SA PL GG E G P+ A L + PS PP L Y T MDG+APGCNCKRSRCLKLYCQCFAAQA CI +CNCQ CLN NH+RAEAIRQI+ERNPNAFQTKFRP+GEDAVHK+GCKCRKSACLKKYCECFNAGARCSDKCSC+ CQNVAG+GRPYEEAVMAARRGATAARQAAQ GQNPALATPQPHMMASMVAAALRQQQ L GGG +KE G GG GG SP+ KR+RSGSSG V G +G D+Q +MSP T R SP Q Q A +F++QGLF +P HPG LPF PGQP F+EQ A L+ASQ LQQ QQQ LEFIQRQQ QAQ Q FQQ QQQQQ Q+Q Q + QSLSPTQLLLLQAQQQ Q QQQQ AG GGG GG GKKS+E SGGDDL+EMVQAAEDLAFLKGSSGPGSK HAEVEAQ QA QQQQQ Q QQ MA A A A++ GGGGGGG GGG GGG Q + QQ F G+P + QQ LDPAQA AA+YAQMQQ GGGGGE +G G GQHE+V
Sbjct: 119 GPRPQPEPARPEEREDGQRQVEYGASKMEKPPAQGLPQLDGGGQQEEEAEARPDDQRAPFQ-EPGQGGSEAGAVVRQEGSEERGERMQPYGQRQEAPPVVAYTGSDENDVEDSEVARATKKED---MGPGSDAEEGHGEGVALDGSRGPGAGQGAAPPPSSLSVPRPISSTLSKGESMGPVNVLWDAQQTQASVAPAAPPSLPARSATDDSAPPLQSVPGGRLLKPEVGLPVVPSQVASLPPSTSSQVTPSQPPTLPA-YGSNVTTMDGVAPGCNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMERNPNAFQTKFRPNGEDAVHKMGCKCRKSACLKKYCECFNAGARCSDKCSCVGCQNVAGLGRPYEEAVMAARRGATAARQAAQQVGQNPALATPQPHMMASMVAAALRQQQQQQVLPEVTGEGVGGGGGVKERGSGG---GGSSPSSKRRRSGSSG--AVPALGSNQGLADQQMPFFHRSLMSPTPTSQRTSPLQGHPAQ---------------AGQPDFSAQGLFSLPPGLQPHHSPHPGLLPFFSPGQPVPPGFFEQHA-LLASQNLQQHQQQQQHQQHQQQLEFIQRQQAQAQAQFFQQLAAQQQQQ-QQQMQQHPLHQSLSPTQLLLLQAQQQQQLLQQQQA-----------------------AGGGGGAGGRGQGKSGKKSSEVSGGDDLQEMVQAAEDLAFLKGSSGPGSKNHAEVEAQFAQAQQQQQQQQGAQQPQPPQDQTQQPQQHYMAFAAAAAASGGGGGGGGAGGGAGGGRPGQGQPFFGQQVAFPGNPFLSGSVPSQQLVAPQFLDPAQAAHMAAMYAQMQQFQ--------------------GGGGGEVADGKKSPGAGQHETV 952
The following BLAST results are available for this feature:
BLAST of NO15G02180.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
500 1000 1500 2000 2500 3000 Expect = 1.00e-138 / Id = 49.56 Sequence EWM22379.1
Match Name E-value Identity Description
EWM22379.1 1.000e-138 49.56 tesmin tso1-like cxc domain-containing protein [Na... [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO15G02180.1 ID=NO15G02180.1|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=3242bp back to top protein sequence of NO15G02180.1
>NO15G02180.1-protein ID=NO15G02180.1-protein|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp back to top mRNA from alignment at chr15:610571..613812+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G02180.1 ID=NO15G02180.1|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=3242bp|location=Sequence derived from alignment at chr15:610571..613812+ (Nannochloropsis oceanica)ATGTCGGAGGTCGAGACCATGCCCATGTC
GTCCAGCACAATAGAGGGACAAGATCAGCAACAACAGTGCGAGCACATGA
AAGGTAGTGCTGGCCCCGAGCCGGAGCCGTCGTCGACAGCCACCGATGGC
GCGGATGCTGCTGCTTCTCCTGCTGCTGCCGATGTTGCGACGGGCGAGGG
AAAGCAAGTCGAGGAGGCGGAGGCCCCCGTCGCCACGGAGCGTGATAATC
TGTCACTGAAAATCAAGGAGGAAGTGGCCGAGGCAGACGGCAAGGAGCGC
AAAGAGGAAGGAAAGGGCGATGTAGAGCAACCACCACAACAGACACCGCA
GCCACCCTCTTCTTCCCCCCAACGCGACGAGAACGAAGTCGAGGACCCAG
AAGTAGCCAGCGCCACGAAGAAGGAAGAAGAAGAGAAGCAGGGCCCTCTA
AACAACAACGCTCCCTCCGCGGCTATCCCTTCGACAGCAGGCGCCAGCGT
GGGGGCCTTGCCGCAACCTCCTCACTCAATCAGCACGTCGGTCAGCAGCA
ACAGGGTGGTGGATATAAAACAAAATTGGGAAGACCAACAAGCCCACGCA
ATAACTATGGCCACCTCTACCACCGCTAATGCGGTCCAAGCCACGAGTGC
GGGCCCTCTCTCCGATGACCGAGGAGGGGGAGGAGGAGGCGGGGAAGGGG
GAGGAGAAGCGTCTCCTGCCTCCTCCGCTGGCCTGCAGCAAGCCGCTCAA
CCATCCTTGCCTCCCGCCCTGGCCATGCCCTACCTTCCTCAGTTTACCGA
GATGGATGGGATGGCCCCTGGGTGTAATTGCAAGCGAAGCCGATGCCTTA
AGCTCTACTGTCAATGTTTCGCCGCCCAAGCCTGTTGTATCTCGGCGTGC
AACTGCCAAGGCTGCCTGAACCTGCCAGCACACAACCACATCCGCGCGGA
GGCCATCCGCCAAATCGTGGAACGGAATCCCAATGCCTTTCAGACCAAGT
TTCGCCCCGATGGCGAAGACGCCGTCCACAAGCTCGGCTGCAAATGTCGG
AAATCCGCGTGTCTGAAAAAGTACTGCGAATGCTTCAATGCGGGCGCCCG
CTGCTCCGACAAGTGCTCCTGTATCAACTGCCAGAATGTAGCTGGCATTG
GTCGTCCCTACGAAGAAGCAGTGATGGCTGCCCGTCGGGGAGCAACAGCG
GCAAGACAAGCAGCCCAAGTGGCAGGACAGAACCCGGCCTTGGCTACACC
GCAACCGCACATGATGGCCTCCATGGTAGCGGCGGCCCTGCGGCAGCAGC
AGCCATACCACCAGCTGATTGGAGGTGGAGCGATAAAAGAGGAAGGTGTT
GGGGGAAGAGGCTTGGGGGGGGGGTCGCCGGCGCACAAGAGAAAGAGGAG
CGGGAGTAGTGGGGAGGTAGGGGTGGGAGGAGAAGGAGGAGGAGAAGGCG
GAGGGGATGAGCAACACCAGCTCCATCGTCCCCCCATTATGTCCCCTATC
TCCACAGGACTACGTGCTTCTCCTTCGCAGCAACAGCAGCAACAAACACC
AGCAGCCGCGGCTGCCGCAGCAGCGGCAGCCGCGGCTGCGGCGCAAGCAC
AGGAGTTTGCGAGTCAGGGCTTGTTCGGGATTCCTGGGCACCCTGGCTTC
CTTCCCTTCCTCCCCCCCGGCCAACCAGCGGCTTTCTACGAGCAACAGGC
CGCGCTTATGGCATCGCAAACATTGCAGCAGCAGCAGCAACAGCTGGAGT
TCATCCAGCGGCAGCAGCAAGCTCAATTTCAGTTGTTCCAGCAGCAGTAC
CAGCAGCAGCAGCAGCAGAACCAGCGGCAGCACCACCAGCAGGCTATGCA
GCAGTCTTTGTCCCCTACCCAGCTCCTACTCCTCCAGGCACAGCAACAAC
ACCAATATTTCCAGCAGCAGCAGTTGCATCAGCAGCATCAACAGCAAATG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACGGCAACAGGCAGG
AAGGGGAGGAGGGAGGGGGGGAGGGAAAAAGTCCGCCGAGGCGTCAGGAG
GGGACGACCTTGAAGAGATGGTGCAAGCAGCGGAAGACTTGGCATTCTTG
AAAGGGTCGAGTGGTCCGGGAAGTAAAGGCCATGCAGAAGTGGAGGCACA
ACTCAACCAAGCCAACCACCAGCAGCAGCAACAGGCAGCGCTGCAGCAAC
AACAACTCATGGCCGCAGCGGTCGCGCTGGCCTCGGCGCAAGGCGGTGGC
GGAGGGGGAGGAGAAGGAGGAGGAGGAGGAGGGGGAGGAGGAAGGCCGGA
ACAGCAACTTTATGCGCAGCAGTTCATGGGACATCCGGCTTTTGCTGCTA
TGGCCATGCAGCAACAGCTGGATCCCGCTCAGGCGGCGGCAGTTTATGCA
CAAATGCAGCAGCAGATGCAGGAACAGCAGAAACAGCAGCAACAGCAACA
ACAACAACAAGTTGGTGGTGGAAGAGGAGGAGGAGGAGGAGGAGAGGGAG
GGGAGGGAGGATTAGGACAGCATGAGTCGGTGTGA back to top Coding sequence (CDS) from alignment at chr15:610571..613812+
>NO15G02180.1 ID=NO15G02180.1|Name=NO15G02180.1|organism=Nannochloropsis oceanica|type=CDS|length=2514bp|location=Sequence derived from alignment at chr15:610571..613812+ (Nannochloropsis oceanica) back to top