NO15G02030, NO15G02030 (gene) Nannochloropsis oceanica

Overview
NameNO15G02030
Unique NameNO15G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2101
Alignment locationchr15:568598..570698 +

Link to JBrowse

Properties
Property NameValue
DescriptionProteasome endopeptidase complex
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:568598..570698 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
GO:0016020membrane
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
GO:0019538protein metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_suA-type
IPR035144Proteasome_alpha1
IPR001353Proteasome_sua/b
IPR000426Proteasome_asu_N
Homology
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: EWM22408.1 (proteasome subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 456.8 bits (1174), Expect = 4.800e-125
Identity = 227/244 (93.03%), Postives = 237/244 (97.13%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSGTTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEVEGNAGGT 263
            MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVD+HIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLV++VADKHQRCTQSYVRRPYGVGLLIASYDQTGPHL+QTDPSGAYYEYIAQAIGSRAQSGKTYLEKY+AEFE LG D+LIKHALKALSGT GDKEL KDNASVAVVGKDHPL+IIEGE LQ+YLDA+EVEG+ G T
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDNHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVVDVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLYQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYHAEFESLGQDELIKHALKALSGTAGDKELSKDNASVAVVGKDHPLEIIEGEALQRYLDAIEVEGDTGDT 244
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: CBN79978.1 (20S proteasome subunit alpha type 1 [Ectocarpus siliculosus])

HSP 1 Score: 362.5 bits (929), Expect = 1.200e-96
Identity = 174/242 (71.90%), Postives = 212/242 (87.60%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEVEGNA 260
            MFRNQYDTDVTVWSPQGRLHQVEYA+EAVKQG  +LGLRS   VVLAALKR+ NE+S+ QKKIFK+D ++G+AI+GLTADARSLAKYMRTE LNHKYVYG+ +QASRLVL++AD HQR TQSYVRRPYGVG+L+A++DQTGPHLFQT PSG Y+EY+A AIG+R+QS KTYLEK++ +FE   +D+L+KHALKALSG  TGDKELD +  ++A+VGKD   + +EGE+LQ Y+DA+E+EGNA
Sbjct:    1 MFRNQYDTDVTVWSPQGRLHQVEYAMEAVKQGGASLGLRSGSHVVLAALKRAPNEMSAPQKKIFKLDSNMGVAIAGLTADARSLAKYMRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQTCPSGNYFEYVAMAIGARSQSAKTYLEKHFEDFENCDLDELVKHALKALSGCVTGDKELDANGLTLAIVGKDKVFESLEGEQLQPYMDAIELEGNA 242
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: XP_009519261.1 (hypothetical protein PHYSODRAFT_541580 [Phytophthora sojae] >EGZ23973.1 hypothetical protein PHYSODRAFT_541580 [Phytophthora sojae])

HSP 1 Score: 324.7 bits (831), Expect = 2.800e-85
Identity = 156/238 (65.55%), Postives = 190/238 (79.83%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGL S  F VL  +KR + EL+ +QKK+FK+DDH+GIAISGLTADAR+LA++MRTE+LNHK+VYGSA+   RLV +VADK Q CTQSY+RRPYGVGLL+A  D+ G HL+QT PSG YYEY   AIG+R+QS +TYLEK++  F  LG D+LI HAL+ + G   GD+EL   N ++AVVG D P QIIEG ELQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLTSSKFAVLCGIKRQSLELAEHQKKVFKIDDHMGIAISGLTADARTLARFMRTESLNHKFVYGSAITVGRLVSDVADKKQECTQSYIRRPYGVGLLVAGVDKKGVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFSNLGKDELIHHALQGVRGCLQGDQELTASNVTIAVVGVDQPFQIIEGAELQPYIDAVEV 238
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: XP_002901731.1 (proteasome subunit alpha, putative [Phytophthora infestans T30-4] >EEY57121.1 proteasome subunit alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 322.0 bits (824), Expect = 1.800e-84
Identity = 154/238 (64.71%), Postives = 192/238 (80.67%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGL S  F VL A+KR + EL+ +QKK+FK+D+H+GIAISGLTADAR+LA++MRTE+LNHK+VYGS++   RLV +VADK Q CTQSY+RRPYGVGLL+A  D+ G HL+QT PSG YYEY   AIG+R+QS +TYLEK++  F  LG D+LI HAL+ + G   GD+EL  +N ++AVVG D P +IIEG ELQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLTSSKFAVLCAIKRQSLELAEHQKKVFKIDEHMGIAISGLTADARTLARFMRTESLNHKFVYGSSITVGRLVSDVADKKQECTQSYIRRPYGVGLLVAGVDKKGVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFPNLGKDELIHHALQGVRGCLQGDQELTANNVTIAVVGVDQPFKIIEGAELQPYIDAVEV 238
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: OWZ23771.1 (Proteasome subunit alpha [Phytophthora megakarya])

HSP 1 Score: 320.5 bits (820), Expect = 5.300e-84
Identity = 153/238 (64.29%), Postives = 190/238 (79.83%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGL S  F VL  +KR + EL+ +QKK+FK+D+H+GIAISGLTADAR+LA++MRTE+LNHK+VYGS++   RLV +VADK Q CTQSY+RRPYGVGLL+A  D+ G HL+QT PSG YYEY   AIG+R+QS +TYLEK++  F  LG D+LI HAL+ + G   GD+EL   N ++AVVG D P +IIEG ELQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLTSNKFAVLCGIKRQSLELAEHQKKVFKIDEHMGIAISGLTADARTLARFMRTESLNHKFVYGSSITVGRLVSDVADKKQECTQSYIRRPYGVGLLVAGVDKKGVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFPNLGKDELIHHALQGVRGCLQGDQELTASNVTIAVVGVDQPFKIIEGSELQPYIDAVEV 238
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: XP_008891774.1 (hypothetical protein PPTG_02446 [Phytophthora parasitica INRA-310] >ETI50050.1 hypothetical protein F443_06329 [Phytophthora parasitica P1569] >ETK89937.1 hypothetical protein L915_06203 [Phytophthora parasitica] >ETL43335.1 hypothetical protein L916_06141 [Phytophthora parasitica] >ETL96527.1 hypothetical protein L917_06019 [Phytophthora parasitica] >ETM49683.1 hypothetical protein L914_06139 [Phytophthora parasitica] >ETN22528.1 hypothetical protein PPTG_02446 [Phytophthora parasitica INRA-310] >ETO78794.1 hypothetical protein F444_06392 [Phytophthora parasitica P1976] >ETP19818.1 hypothetical protein F441_06337 [Phytophthora parasitica CJ01A1] >ETP47775.1 hypothetical protein F442_06372 [Phytophthora parasitica P10297] >KUF80811.1 Proteasome subunit alpha type [Phytophthora nicotianae])

HSP 1 Score: 319.3 bits (817), Expect = 1.200e-83
Identity = 153/238 (64.29%), Postives = 190/238 (79.83%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGL S  F VL  +KR + EL+ +QKK+FK+D+H+GIAISGLTADAR+LA++MRTE+LNHK+VYGS++   RLV +VADK Q CTQSY+RRPYGVGLL+A  D+ G HL+QT PSG YYEY   AIG+R+QS +TYLEK++  F  LG D+LI HAL+ + G   GD+EL   N ++AVVG D P +IIEG ELQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLTSNKFAVLCGIKRQSLELAEHQKKVFKIDEHMGIAISGLTADARTLARFMRTESLNHKFVYGSSITVGRLVSDVADKKQECTQSYIRRPYGVGLLVAGVDKKGVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFPNLGKDELIHHALQGVRGCLQGDQELTAANVTIAVVGVDQPFKIIEGAELQPYIDAVEV 238
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: POM57452.1 (Proteasome subunit alpha [Phytophthora palmivora var. palmivora])

HSP 1 Score: 319.3 bits (817), Expect = 1.200e-83
Identity = 153/238 (64.29%), Postives = 189/238 (79.41%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGL S  F VL  +KR + EL+ +QKK+FK+D+H+GIAISGLTADAR+LA++MRTE+LNHK+VYGS++   RLV +VADK Q CTQSY+RRPYGVGLL+A  D+ G HL+QT PSG YYEY   AIG+R+QS +TYLEK++  F  LG D+LI HAL+   G   GD+EL   N ++AVVG D P +IIEG ELQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLTSNKFAVLCGIKRQSLELAEHQKKVFKIDEHMGIAISGLTADARTLARFMRTESLNHKFVYGSSITVGRLVSDVADKKQECTQSYIRRPYGVGLLVAGVDKKGVHLYQTCPSGNYYEYKGIAIGARSQSARTYLEKHFESFPNLGKDELIHHALQGARGCLQGDQELTASNVTIAVVGVDQPFKIIEGAELQPYIDAVEV 238
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: XP_008880278.1 (hypothetical protein H310_14245 [Aphanomyces invadans] >ETV91082.1 hypothetical protein H310_14245 [Aphanomyces invadans])

HSP 1 Score: 316.6 bits (810), Expect = 7.700e-83
Identity = 159/239 (66.53%), Postives = 191/239 (79.92%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKR-SANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGLRS   VVLAA+KR  + +L+   KK+F++D H+GIAI+GLTADARSLA++MRTEALNHK+VYGSAL  +RLV +VADK Q CTQSYVRRPYGVGLL+A  D+ GPHLFQT PSG YYEY   AIG+R+QS +TYLEK++  F  LG DDLIKHAL+A+ G   G++EL   N SV+VVG +    IIEG  LQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLRSNSTVVLAAIKRVQSEQLADPTKKLFEIDTHMGIAIAGLTADARSLARFMRTEALNHKFVYGSALPVARLVSDVADKKQECTQSYVRRPYGVGLLVAGVDKNGPHLFQTCPSGNYYEYNGIAIGARSQSARTYLEKHFQSFPTLGKDDLIKHALQAIRGCLEGNQELSATNISVSVVGVNQSFTIIEGAALQPYIDAVEV 239
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: XP_012209357.1 (hypothetical protein SPRG_14825 [Saprolegnia parasitica CBS 223.65] >KDO19917.1 hypothetical protein SPRG_14825 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 314.3 bits (804), Expect = 3.800e-82
Identity = 155/239 (64.85%), Postives = 189/239 (79.08%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKR-SANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGLRS   VVLA +KR +A +L+  QKK+F++D H+G+AI+GLTADARSLA++MRTE LNHK+VYGSAL  +RLV +VADK Q CTQSYVRRPYGVGLL+A  D+ GPHLFQT PSG YYEY A AIG+R+QS +TYLEK++  F     DDLIKHAL+ + G   G +EL   N ++AVVG D    +IEG +LQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLRSSTHVVLAGIKRVNAEQLADPQKKLFEIDSHMGMAIAGLTADARSLARFMRTECLNHKFVYGSALPVARLVADVADKKQECTQSYVRRPYGVGLLVAGVDKNGPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFETFPNSSKDDLIKHALQGIRGCLEGSQELSASNVTIAVVGADQKFILIEGADLQPYIDAVEV 239
[Close]
BLAST of NO15G02030 vs. NCBI_GenBank
Match: XP_008607531.1 (20S proteasome subunit alpha 6 [Saprolegnia diclina VS20] >EQC38707.1 20S proteasome subunit alpha 6 [Saprolegnia diclina VS20])

HSP 1 Score: 313.9 bits (803), Expect = 5.000e-82
Identity = 155/239 (64.85%), Postives = 189/239 (79.08%), Query Frame = 0 
Query:   19 MFRNQYDTDVTVWSPQGRLHQVEYALEAVKQGACALGLRSKDFVVLAALKR-SANELSSYQKKIFKVDDHIGIAISGLTADARSLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGLLIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEELGVDDLIKHALKALSG-TTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYLDAVEV 256
            MFRNQYDTDVTVWSPQG LHQ++YA+EAVKQG+  LGLRS   VVLA +KR +A +L+  QKK+F++D H+G+AI+GLTADARSLA++MRTE LNHK+VYGSAL  +RLV +VADK Q CTQSYVRRPYGVGLL+A  D+ GPHLFQT PSG YYEY A AIG+R+QS +TYLEK++  F     DDLIKHAL+ + G   G +EL   N ++AVVG D    +IEG +LQ Y+DAVEV
Sbjct:    1 MFRNQYDTDVTVWSPQGHLHQIDYAMEAVKQGSACLGLRSATHVVLAGIKRVNAEQLADPQKKLFEIDSHMGMAIAGLTADARSLARFMRTECLNHKFVYGSALPVARLVADVADKKQECTQSYVRRPYGVGLLVAGVDKNGPHLFQTCPSGNYYEYNAIAIGARSQSARTYLEKHFETFPNSSKDDLIKHALQGIRGCLEGSQELSASNVTIAVVGADQKFILIEGADLQPYIDAVEV 239
The following BLAST results are available for this feature:
BLAST of NO15G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22408.14.800e-12593.03proteasome subunit alpha [Nannochloropsis gaditana... [more]
CBN79978.11.200e-9671.9020S proteasome subunit alpha type 1 [Ectocarpus si... [more]
XP_009519261.12.800e-8565.55hypothetical protein PHYSODRAFT_541580 [Phytophtho... [more]
XP_002901731.11.800e-8464.71proteasome subunit alpha, putative [Phytophthora i... [more]
OWZ23771.15.300e-8464.29Proteasome subunit alpha [Phytophthora megakarya][more]
XP_008891774.11.200e-8364.29hypothetical protein PPTG_02446 [Phytophthora para... [more]
POM57452.11.200e-8364.29Proteasome subunit alpha [Phytophthora palmivora v... [more]
XP_008880278.17.700e-8366.53hypothetical protein H310_14245 [Aphanomyces invad... [more]
XP_012209357.13.800e-8264.85hypothetical protein SPRG_14825 [Saprolegnia paras... [more]
XP_008607531.15.000e-8264.8520S proteasome subunit alpha 6 [Saprolegnia diclin... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001421NSK001421Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02030.1NO15G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587770gene_4755Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100067g28gene8048Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02030.1NO15G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02030 ID=NO15G02030|Name=NO15G02030|organism=Nannochloropsis oceanica|type=gene|length=2101bp
CCTGTTTTCAGCCACCCGCTTATTTTGTGCGTCTCCTTTGTGCGTCGCTA
CAACAATTCAACGGACTAACCCTTAATCACCAAGTTCCATGGATTGATGT
AAAAGCATGGTTTTTCGCTTCCTCTCGTCTTGCCGAGCACAGTGGTGACT
GTCTCGCATCGCACATCGTCTTACTTCACGAGATGATTGTCTTTGTCTCC
CATGTCCTTGTGACAAGCGCTAAGGCCTTCAAGGCCCACTCCCCCCTACC
ATGGTGCTCAAATCTGTAATCTGTGTCATTCCGCCCCTTGTCTTGCACCG
AAGCAACTGACTCGGAGGGCTTCTCCAAAAGGCCGGCACATCGCCACAGA
CGACGACTTCGCTTTCCTTCCTTGCGAGGATGCTTTCTCTGCAGTGCCTC
ACCCTGAAAGCTTGACTAGGCTGCCGCCACTTTTCTCGATGAGGTAGATG
AGGATACTGGGGTCACACTGACACGCCGGGGTGGGCGACGGTCCTCGGGG
GGAAGAAAGCTCCCTGGCGAAGCGAAGAAGACGAAGAAGGTGATGCTTCC
CTGCACTCACCTTTGCCCTCTCCCTCATACACCCACTCAGGCAGACATGT
TCCGCAACCAGTACGATACCGATGTTACTGTGTGGAGTCCTCAGGGCCGG
CTGCATCAAGTGGAGTACGCGTTGGAGGCGGTCAAGCAGgtatgtagagg
actgcaaaaggataggaggctagcaaatagtcatgtcggggagattgtcg
tgtacatgtagtggaggggatgtcacagcaccacggcacaataaagaaag
atatcttaacgtagggatgagtaccaaagatatttaggaggctgcggttt
ggagccagataattagacgctcactctcccccttccctcaacttcccctc
tccctcccctgatagGGTGCCTGTGCCCTCGGCCTGCGCTCCAAGGACTT
CGTCGTTCTAGCGGCCCTCAAGCGTTCGGCCAATGAACTGTCGTCATACC
AAAAGAAGATTTTCAAGGTGGACGATCATATCGGGATTGCCATTTCGGGC
TTGACTGCCGATGCCCGCTCTTTGGCCAAGTACATGCGGACCGAGGCCTT
GAACCATAAGTACGTCTATGGCAGCGCTTTACAGGCCAGCCGGTTGGTGT
TGAATGTTGCAGACAAGCATCAGCGATGCACTCAGTCTTATGTTCGACGG
CCGTATGGTGTGGGGCTATTGgtacgtggtggggaaaagagggaaggagg
aattgaggaagtacggggttttgacttcggtctttctgtaaatataaggc
ctgctatgccatgccctacacccccgtggactcacatccgaagtatgttc
tcacctttcctcctcctttccttccattacagATTGCTTCCTACGACCAG
ACTGGCCCCCACCTCTTCCAAACCGACCCCTCGGGTGCCTACTACGAATA
TATTGCCCAAGCCATCGGCTCGCGCGCGCAATCCGGCAAGACATATCTAG
AGAAGTATTATGCGGAGTTTGAGGAGCTGGGTGTGGATGATTTGATCAAG
CATGCGTTGAAGGCGCTTTCGGGGACGACGGgtaagtgtagaggatgggg
agggaggaaaggaggaaaggaagggaggatattattcattgaggtccaat
gtcgtgtctagagtcgtacagatgactcatcatagaactcatgacaatca
cactggtagGAGACAAGGAGCTGGATAAGGACAATGCTTCGGTAGCTGTG
GTGGGGAAAGATCATCCGTTACAGATCATTGAGGGAGAGGAGCTGCAAAA
GTACTTGGATGCGGTCGAGGTGGAGGGCAATGCCGGCGGGACGGCGGCGG
GTGAGGAGGCGATGGAGCTGGCGTCGGAGGGAGAGAGTATGAGCACGTCG
TAAATTGTGTGTGGGACAGGGGAGAGGAGGGGGATGCTTGGAAGTGGTAG
GTAAAGGAGGGCATTCGTAAAAGGGTCCAAGGCGGAAGAAGAAAAAGAAG
AAAAAAATATTGTTCGCTCGATCATGACGTATTTTCGGTGACCGTCTGTG
TCAGTGTGTCTTGCATATTCAATTCACTTCGTTTTCTCGGGCGAAAACGG
G
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protein sequence of NO15G02030.1

>NO15G02030.1-protein ID=NO15G02030.1-protein|Name=NO15G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MLPCTHLCPLPHTPTQADMFRNQYDTDVTVWSPQGRLHQVEYALEAVKQG
ACALGLRSKDFVVLAALKRSANELSSYQKKIFKVDDHIGIAISGLTADAR
SLAKYMRTEALNHKYVYGSALQASRLVLNVADKHQRCTQSYVRRPYGVGL
LIASYDQTGPHLFQTDPSGAYYEYIAQAIGSRAQSGKTYLEKYYAEFEEL
GVDDLIKHALKALSGTTGDKELDKDNASVAVVGKDHPLQIIEGEELQKYL
DAVEVEGNAGGTAAGEEAMELASEGESMSTS*
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Synonyms
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