NO15G01990, NO15G01990 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01990 vs. NCBI_GenBank
Match: EWM22400.1 (hypothetical protein Naga_100067g22 [Nannochloropsis gaditana]) HSP 1 Score: 117.5 bits (293), Expect = 3.300e-23 Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0
Query: 77 LSLKPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
LSLKPC +C+RD+DLLIRCQ+D+S W MVCGKCW++VSGGV DGD AHP+YRYGGLWKAR
Sbjct: 129 LSLKPCVICNRDQDLLIRCQVDSSLEWKMVCGKCWREVSGGVVDGDAAHPHYRYGGLWKAR 189
BLAST of NO15G01990 vs. NCBI_GenBank
Match: EJK69807.1 (hypothetical protein THAOC_08899 [Thalassiosira oceanica]) HSP 1 Score: 101.7 bits (252), Expect = 1.900e-18 Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
K C +C + DLLIRCQID S W M CGKCW DVSGGV DGD++HP+YRYGGLWK R
Sbjct: 628 KQCTICGKSVDLLIRCQIDESQTWHMSCGKCWNDVSGGVVDGDDSHPHYRYGGLWKNR 685
BLAST of NO15G01990 vs. NCBI_GenBank
Match: OLQ09640.1 (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [Symbiodinium microadriaticum]) HSP 1 Score: 101.3 bits (251), Expect = 2.500e-18 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
KPC LC R DLL+RC+ID S W M+CG+CWK SGGV DGD +HP+YRYGGLWK R
Sbjct: 339 KPCTLCQRPVDLLVRCRIDISQKWHMLCGRCWKKASGGVPDGDASHPHYRYGGLWKNR 396
BLAST of NO15G01990 vs. NCBI_GenBank
Match: XP_002289258.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92795.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 100.5 bits (249), Expect = 4.200e-18 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
K C +C++ +LLIRC D+S W MVCGKCW D+SGGV DGD AHPYYRYGGLWK R
Sbjct: 168 KQCTICNKSVNLLIRCTYDSSEEWGMVCGKCWNDISGGVVDGDAAHPYYRYGGLWKNR 225
BLAST of NO15G01990 vs. NCBI_GenBank
Match: XP_002180341.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48532.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.8 bits (247), Expect = 7.200e-18 Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 76 SLSLKPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
S K C CH+ DLLIRC +D S +W MVCG+CWK VSGGV DGD HP+YRYGGLWK R
Sbjct: 302 SYGRKECTQCHQSVDLLIRCVVDASGDWEMVCGRCWKSVSGGVVDGDADHPHYRYGGLWKNR 363
BLAST of NO15G01990 vs. NCBI_GenBank
Match: XP_002180346.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48537.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.8 bits (247), Expect = 7.200e-18 Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 76 SLSLKPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
S K C CH+ DLLIRC +D S +W MVCG+CWK VSGGV DGD HP+YRYGGLWK R
Sbjct: 142 SYGRKECTQCHQSVDLLIRCVVDASGDWEMVCGRCWKSVSGGVVDGDADHPHYRYGGLWKNR 203
BLAST of NO15G01990 vs. NCBI_GenBank
Match: GAX20478.1 (hypothetical protein FisN_22Hu046 [Fistulifera solaris]) HSP 1 Score: 97.4 bits (241), Expect = 3.600e-17 Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWKAR 138
K CD+C + +LLIRC ID S W MVCGKCW VSGGV DGD HP+YRYGGLWK R
Sbjct: 162 KSCDVCQKSVNLLIRCTIDASGEWKMVCGKCWHSVSGGVVDGDANHPHYRYGGLWKNR 219
BLAST of NO15G01990 vs. NCBI_GenBank
Match: PQE32660.1 (hypothetical protein CJF32_00004175 [Rutstroemia sp. NJR-2017a WRK4]) HSP 1 Score: 96.7 bits (239), Expect = 6.100e-17 Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVC-GKCWKDVSGGVADGDEAHPYYRYGGLWK 136
KPC LCH RD+LIRCQID S W VC GKCW VSGG DGD AHP YRYGG+WK
Sbjct: 56 KPCSLCHTSRDVLIRCQIDESQKWHFVCTGKCWTRVSGGKVDGDAAHPRYRYGGMWK 112
BLAST of NO15G01990 vs. NCBI_GenBank
Match: XP_001692918.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 95.9 bits (237), Expect = 1.000e-16 Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVCGKCWKDVSGGVADGDEAHPYYRYGGLWK 136
KPC LC R RDLL+RCQ+D S W M CGKCW SGG DG + P+YRYGGLWK
Sbjct: 40 KPCSLCSRSRDLLVRCQVDASGTWHMACGKCWMAASGGAVDGSASKPHYRYGGLWK 95
BLAST of NO15G01990 vs. NCBI_GenBank
Match: CCD49009.1 (hypothetical protein BofuT4_P028850.1 [Botrytis cinerea T4]) HSP 1 Score: 95.9 bits (237), Expect = 1.000e-16 Identity = 38/57 (66.67%), Postives = 43/57 (75.44%), Query Frame = 0
Query: 80 KPCDLCHRDRDLLIRCQIDTSSNWFMVC-GKCWKDVSGGVADGDEAHPYYRYGGLWK 136
KPC +CH RD+LIRCQID + W VC G+CWKDVSGG DGD HP YRYGG+WK
Sbjct: 111 KPCTICHTPRDVLIRCQIDDTKKWHFVCTGRCWKDVSGGKVDGDGKHPAYRYGGMWK 167 The following BLAST results are available for this feature:
BLAST of NO15G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01990 ID=NO15G01990|Name=NO15G01990|organism=Nannochloropsis oceanica|type=gene|length=414bpback to top protein sequence of NO15G01990.1 >NO15G01990.1-protein ID=NO15G01990.1-protein|Name=NO15G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=138bpback to top Synonyms
Publications
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