NO14G03200, NO14G03200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G03200 vs. NCBI_GenBank
Match: EWM24485.1 (Mog1/PsbP/DUF1795, alpha/beta/alpha sandwich [Nannochloropsis gaditana]) HSP 1 Score: 234.2 bits (596), Expect = 3.100e-58 Identity = 117/164 (71.34%), Postives = 139/164 (84.76%), Query Frame = 0 Query: 6 EGVRSHALFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMSKTGVVPHLDAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLPPSAQAPAAAEFSQTLFIQ 170 E VRSHALFGGAIT +LPASF++ S+IRQVPDNQEVF+D +SDASLILELL+LER KEGLEAA YFF DLAEHN+AQ A IQ++ D+S T +VP+L AYPTY L+GTQ++SKFH AA VRIYLVNVRLQQTGTD++LTLNLP AQAPAAA F+ +F++ Sbjct: 10 EKVRSHALFGGAITISLPASFSSASDIRQVPDNQEVFIDDASDASLILELLDLERDKEGLEAATYFFNDLAEHNDAQNATIQYKEDLSGTSLVPNLAAYPTYALVGTQTVSKFHAADAALLPVRIYLVNVRLQQTGTDVLLTLNLPALAQAPAAASFNAAMFVK 173
BLAST of NO14G03200 vs. NCBI_GenBank
Match: GBG31605.1 (Ran guanine nucleotide release factor [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 116.3 bits (290), Expect = 9.600e-23 Identity = 66/156 (42.31%), Postives = 100/156 (64.10%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMSKTGVVPHLD-----AYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLPPSAQAPAAAEFS 164 LFGGAIT +LPA+FA+VS +R+VPD+QEVF DQ++D S+I+E+LEL + A KYFF DLA N ++A I++ VP LD A + +IGTQ ++KF +A ++R++L N+RL + TD++++LN P A +++ S Sbjct: 34 LFGGAITASLPAAFADVSTVREVPDHQEVFADQNTDRSIIVEVLELTASESNETAGKYFFEDLAGANGSEATVIEYSEVGVPATSVPCLDKVADPAAASNVVIGTQVVAKFR--ESAKNTIRVFLCNIRLPKYTTDILISLNAPVKVSAESSSAAS 187
BLAST of NO14G03200 vs. NCBI_GenBank
Match: CBJ29147.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.1 bits (266), Expect = 5.800e-20 Identity = 59/146 (40.41%), Postives = 93/146 (63.70%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLEL-------ERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMSKTGVVPHLDAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLP 152 LFGGA+ LPA++ +VS++RQVPD+QEVF + S+++E+L E+ ++ +A++FF DLA N A ++ F D+S + ++P L +Y L G Q+++KF A +VR+YLVNVRL GTDL++T+N+P Sbjct: 14 LFGGAMECLLPAAYVDVSDLRQVPDHQEVFASKEDGISIVIEVLSFEADINMDEQARKDGASARHFFDDLAAANGATSSACDFCGDLSDS-IMPKLASYTKSALAGRQTVAKFR-QDAPPDAVRLYLVNVRLPNVGTDLLITVNVP 157
BLAST of NO14G03200 vs. NCBI_GenBank
Match: OBZ83865.1 (putative ran guanine nucleotide release factor [Choanephora cucurbitarum]) HSP 1 Score: 105.9 bits (263), Expect = 1.300e-19 Identity = 65/160 (40.62%), Postives = 92/160 (57.50%), Query Frame = 0 Query: 8 VRSHALFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMSKTGVVPHL--DAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLP-PSAQAPAAAEFSQ 165 + + +LFGGAI +P+SF + S+ RQ+PDNQEVFVD ++ SLI ELLE K + AK+ F LA+ NEA A + + + V P L DA Y L GTQ +SKF+ A +V I + +RL Q TD V+++N P A + E++Q Sbjct: 1 MNTQSLFGGAILSPVPSSFVDASQFRQIPDNQEVFVDMNTQQSLIFELLEQVEAKH-TDVAKFHFQQLADDNEATDATVSYVEQLDPKEVSPLLTSDATELYILQGTQKVSKFN-EKQADNTVEIVMAVIRLIQVETDFVISINAPIQLANTSSEREYAQ 158
BLAST of NO14G03200 vs. NCBI_GenBank
Match: ORX91419.1 (Ran GTPase binding protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 104.4 bits (259), Expect = 3.800e-19 Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMSKTGVVPHL--DAYPTYCLIGTQSISKFH-TPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLP 152 LFGGAIT +P +F ++S++R+VPDNQEV+VD ++D S+I+ELLEL + A Y F +AEHN+A A N + + VP+L DA Y L+G Q+ISK++ + A V IYL R+ + TD++++ N P Sbjct: 10 LFGGAITTYVPTTFIDISQLREVPDNQEVYVDTNTDQSVIVELLELAEEAADADCASYHFKQIAEHNDASAENQILKVVQLEDSEVPNLPKDA-KKYLLVGRQTISKYNESDPNARNVVNIYLAVFRIPKITTDIIVSYNHP 150
BLAST of NO14G03200 vs. NCBI_GenBank
Match: KDE06641.1 (hypothetical protein MVLG_02994 [Microbotryum lychnidis-dioicae p1A1 Lamole]) HSP 1 Score: 103.6 bits (257), Expect = 6.400e-19 Identity = 64/143 (44.76%), Postives = 87/143 (60.84%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLEL---ERGKEGLEAA-KYFFCDLAEHNEAQAANIQFQADMSKTGVVPHLDAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLP 152 LFGGAIT T P++ + S++RQVPD QEV++ SD SLILE+L+L E E LEA +Y F LA NEA + +I + + T P L T L+GTQSISKF+ ++ V ++L R+ + TDLVLT+N P Sbjct: 6 LFGGAITTTYPSNLTDASDVRQVPDTQEVYLSNDSDLSLILEVLQLVEEEGSGESLEAGIRYHFASLAHDNEALSYSIDSTSQPTTTSPHPLLQGPIT--LLGTQSISKFNKTASQADQVTVFLALWRIPEKKTDLVLTVNWP 146
BLAST of NO14G03200 vs. NCBI_GenBank
Match: XP_024582682.1 (RAN guanine nucleotide release factor [Plasmopara halstedii] >CEG46313.1 RAN guanine nucleotide release factor [Plasmopara halstedii]) HSP 1 Score: 102.8 bits (255), Expect = 1.100e-18 Identity = 60/167 (35.93%), Postives = 97/167 (58.08%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHN----EAQAANIQFQADMSKTGV-VPHLDAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLP----PSAQAPAAAEFSQTLFIQV 171 LFGGA++ +P F +VS RQVPDNQEVF + ++D +I+ELL+ E + ++A+YFF ++A+ N + A ++ + D TGV VPH+ ++G Q ++KF A VR+YL N+RL TD+VL+++ P P++ + A +F + V Sbjct: 5 LFGGALSCEIPEDFVDVSSFRQVPDNQEVFANATTDQCVIVELLQFEESVDDNQSARYFFNEIAQSNGCGPDEVAVLLEEKTDTKLTGVDVPHI----MRIIVGDQCVAKFKEGDHAKNVVRVYLGNIRLPSVTTDVVLSVSAPMRINPASSSRNAFQFEDNSEVSV 167
BLAST of NO14G03200 vs. NCBI_GenBank
Match: XP_006627500.1 (PREDICTED: ran guanine nucleotide release factor [Lepisosteus oculatus]) HSP 1 Score: 102.4 bits (254), Expect = 1.400e-18 Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 0 Query: 7 GVRSHALFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMS--KTGVVPHLDAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLPPS 154 G SH LFGGA++ LP S ++SE+R++PDNQEVF Q SD SLI+ELLE + EAA+Y F D+A NEA + + ++ D + L GTQ +SKF+ A +V IYL RL Q TD+++T N P S Sbjct: 5 GSDSHPLFGGALSAVLPHSICDISELREIPDNQEVFAHQHSDQSLIVELLEYQSHVLDGEAARYHFEDVARSNEAGGPGVSEVRSLEPLAKALLSLPDCSSAWLLAGTQLVSKFN--EEAKNTVNIYLGLFRLPQHSTDIMVTFNDPVS 151
BLAST of NO14G03200 vs. NCBI_GenBank
Match: EXX71284.1 (Mog1p [Rhizophagus irregularis DAOM 197198w] >GBC37739.1 ran GTPase binding protein mog1 [Rhizophagus irregularis DAOM 181602] >PKC65492.1 Mog1p/PsbP-like protein [Rhizophagus irregularis] >PKK64651.1 Mog1p/PsbP-like protein [Rhizophagus irregularis] >PKY28510.1 Mog1p/PsbP-like protein [Rhizophagus irregularis] >PKY56554.1 Mog1p/PsbP-like protein [Rhizophagus irregularis] >POG59955.1 hypothetical protein GLOIN_2v1717269 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 101.7 bits (252), Expect = 2.400e-18 Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLELERGKEGLEAAKYFFCDLAEHNEAQAANIQFQADMSKTGVVPHLDA-YPTYCLIGTQSISKFHTPS-AAHQSVRIYLVNVRLQQTGTDLVLTLNLP-PSAQAPAAAEFSQTLFIQVG 172 LFGG+I+ +P SF ++S +R VPDNQEVF D ++D S+I+E+LE + +AAKY F +A N+A+ N Q + +P+L + P Y G QS++KF+ +A V IY+ R TD+V+T N+P A ++ + +Q IQVG Sbjct: 5 LFGGSISMYIPPSFEDISNVRNVPDNQEVFADVNTDQSIIVEILEFVKQVANEDAAKYHFDSIASDNDAENFNTIHQITQLTSQEIPNLPSDTPMYFCTGQQSVAKFNEKDPSARNLVNIYMALFRFPNYDTDIVITYNIPILIGAASSSRQTAQEGNIQVG 166
BLAST of NO14G03200 vs. NCBI_GenBank
Match: SCV66964.1 (BQ2448_5610 [Microbotryum intermedium]) HSP 1 Score: 101.7 bits (252), Expect = 2.400e-18 Identity = 64/143 (44.76%), Postives = 89/143 (62.24%), Query Frame = 0 Query: 13 LFGGAITFTLPASFANVSEIRQVPDNQEVFVDQSSDASLILELLEL---ERGKEGLEAA-KYFFCDLAEHNEAQAANIQFQADMSKTGVVPHLDAYPTYCLIGTQSISKFHTPSAAHQSVRIYLVNVRLQQTGTDLVLTLNLP 152 LFGGAIT T P++ + S++RQVPD QEV++ SD SLILE+L+L E LEA +Y F LA N+AQ+ +I+ + S+T P L T L GTQ+ISKF+ P++ V I+L R++ +DLVLT+N P Sbjct: 6 LFGGAITTTYPSNLTDASDLRQVPDTQEVYLSNDSDLSLILEVLQLVEEEGSDRSLEAGIRYHFASLAYDNDAQSDSIESTSLPSRTTSDPLLQGPIT--LKGTQTISKFNKPTSQADEVVIFLALWRIEDKRSDLVLTVNWP 146 The following BLAST results are available for this feature:
BLAST of NO14G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G03200 ID=NO14G03200|Name=NO14G03200|organism=Nannochloropsis oceanica|type=gene|length=1513bpback to top protein sequence of NO14G03200.4 >NO14G03200.4-protein ID=NO14G03200.4-protein|Name=NO14G03200.4|organism=Nannochloropsis oceanica|type=polypeptide|length=239bpback to top protein sequence of NO14G03200.3 >NO14G03200.3-protein ID=NO14G03200.3-protein|Name=NO14G03200.3|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top protein sequence of NO14G03200.2 >NO14G03200.2-protein ID=NO14G03200.2-protein|Name=NO14G03200.2|organism=Nannochloropsis oceanica|type=polypeptide|length=177bpback to top protein sequence of NO14G03200.1 >NO14G03200.1-protein ID=NO14G03200.1-protein|Name=NO14G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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