NO14G02980, NO14G02980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_106456040.1 (nickel pincer cofactor biosynthesis protein LarB [Aphanothece hegewaldii] >PSF38075.1 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase [Aphanothece hegewaldii CCALA 016]) HSP 1 Score: 196.4 bits (498), Expect = 1.700e-46 Identity = 125/319 (39.18%), Postives = 168/319 (52.66%), Query Frame = 0 Query: 102 YDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 ++ V+ FAKID+ R RTG PE+I+G GKT EQ+++I+HS+ E S+P +++A+R+SS+ L E + G L Y PV R+ L+ + G+++++ AGTAD+ VAEEAA AELCG EVQR++DVGVAGIHRL + D I S +++ VAGM+GALP+VVAG++ CPVIAVPTS+GYGV G+APLLTMLN+CA G+A VNIDNG GAA +A KILR R Sbjct: 33 FEPVEDFAKIDHHRHLRTGFPEVIWGPGKTSEQIISIIHSLRE----------------------------------------------------------SAP----------IVMATRISSDVAQQLLEQIPG-----------------LIYYPVARICALK-------------SSQIPTQQGIISILTAGTADIPVAEEAAITAELCGFEVQRLWDVGVAGIHRLLSHRDLITSSDILIVVAGMEGALPSVVAGMVECPVIAVPTSIGYGVSFGGVAPLLTMLNSCATGIAVVNIDNGFGAAILAGKILRTAAR 253
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_017322798.1 (nickel pincer cofactor biosynthesis protein LarB [cyanobacterium PCC 7702]) HSP 1 Score: 193.4 bits (490), Expect = 1.500e-45 Identity = 133/365 (36.44%), Postives = 172/365 (47.12%), Query Frame = 0 Query: 56 TPTSSIRSILSRLGQGTLNPSQAEXXXXXXXXXXXXXXXXXXXXXGYDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 T +++RS+L + G++NP A Y+ V FAKID R RTG PE+I+G GKTPEQ+ I+ M +R NP V++A+R+ S +AAL+ ++G L Y + R+ + P G V+++ AGTADL VAEEAA AELCG VQR++DVGVAGIHRL + + V++ VAGM+GALP+VVAGL CPVIAVPTSVGYG GLAPLLTMLN+CAPGV VNIDNG GAA +A +ILR + Sbjct: 2 TDETTLRSLLENVANGSINPDAA---------------LQKLKHLNYEPVGEFAKIDNHRSLRTGFPEVIWGPGKTPEQIAQIMEVMRQR-------------------NP-------------------------------------------------VVMATRIDSAVFAALQSKVRG-----------------LRYYEMARICAITPSEIKPRYP------------GTVSILSAGTADLPVAEEAAVTAELCGFHVQRLWDVGVAGIHRLLNNRHIVTSASVLIVVAGMEGALPSVVAGLADCPVIAVPTSVGYGANFGGLAPLLTMLNSCAPGVGVVNIDNGFGAAVLAGQILRTAEK 254
BLAST of NO14G02980 vs. NCBI_GenBank
Match: PPT07395.1 (Circadian phase modifier [Geitlerinema sp. FC II]) HSP 1 Score: 193.4 bits (490), Expect = 1.500e-45 Identity = 122/319 (38.24%), Postives = 161/319 (50.47%), Query Frame = 0 Query: 102 YDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 Y+ V FAKID R RTG PE+I+G+ KTPEQ+ I+ +M +R H ++A+RVS+E YA +R+ ++ + Y P R+ + P G + V+ AGTADL VAEEAAT AELCG EV R++DVGVAG+HRL + ++HV++ VAGM+GALP+VVAGL+ CPVI VPTS+GYGV +G+APLLTMLN+CA G+ VNIDNG GAA +A +ILR HR Sbjct: 32 YEPVGDFAKIDNHRSLRTGFPEVIWGQDKTPEQIAEIMLAMRDR--------------------------------------------------------------------HPTVMATRVSAEVYAQVRDRVR-----------------DVRYYPQARICAIAPHPLEPRYP------------GAIGVLSAGTADLPVAEEAATTAELCGFEVLRLWDVGVAGLHRLLDNRHLLTKAHVLIVVAGMEGALPSVVAGLVDCPVIGVPTSIGYGVSFNGVAPLLTMLNSCAAGIGVVNIDNGFGAAVLAGQILRTAHR 253
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_017659501.1 (nickel pincer cofactor biosynthesis protein LarB [Geitlerinema sp. PCC 7105]) HSP 1 Score: 193.0 bits (489), Expect = 1.900e-45 Identity = 121/319 (37.93%), Postives = 161/319 (50.47%), Query Frame = 0 Query: 102 YDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 Y+ V FAKID R RTG PE+I+G+ KTPEQ+ I+ +M +R H ++A+RVS+E YA +R+ ++ + Y P R+ + P G + V+ AGTADL VAEEAAT AELCG EV R++DVGVAG+HRL + ++HV++ VAGM+GALP+VVAGL+ CPV+ VPTS+GYGV +G+APLLTMLN+CA G+ VNIDNG GAA +A +ILR HR Sbjct: 32 YEPVGDFAKIDNHRSLRTGFPEVIWGQDKTPEQIAEIMLAMRDR--------------------------------------------------------------------HPTVMATRVSAEVYAQVRDRVR-----------------DVRYYPQARICAIAPHPLEPRYP------------GAIGVLSAGTADLPVAEEAATTAELCGFEVLRLWDVGVAGLHRLLDNRHLLTKAHVLIVVAGMEGALPSVVAGLVDCPVVGVPTSIGYGVSFNGVAPLLTMLNSCAAGIGVVNIDNGFGAAVLAGQILRTAHR 253
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_009627032.1 (nickel pincer cofactor biosynthesis protein LarB [Pseudanabaena biceps] >ELS32827.1 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase [Pseudanabaena biceps PCC 7429]) HSP 1 Score: 192.6 bits (488), Expect = 2.500e-45 Identity = 122/319 (38.24%), Postives = 165/319 (51.72%), Query Frame = 0 Query: 102 YDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 Y+SV FAKID+ R RTG PE+I+G GKTPEQ++ I+H M S +PL ++A+++S+E YA ++ S++G L Y P+ ++ L T G +T++ AGTADL +AEEAA ELCG V+R++DVGVAGIHRL + + I + V++ VAGM+GAL +VVAGL CP++AVPTS+GYG +GLAPLLTMLN+CA GV VNIDNG GAA +A KILR+ +R Sbjct: 31 YESVGDFAKIDHHRMLRTGFPEVIFGLGKTPEQIVQIMHVM----------------------------------------------------------ESKNPL----------VMATKISAEVYAQIQPSLRG-----------------LRYFPIAQICCL--------------GESTMQKEGTITIITAGTADLPIAEEAAITGELCGFVVKRLWDVGVAGIHRLLSHREAIADADVIIVVAGMEGALASVVAGLADCPIVAVPTSIGYGASFNGLAPLLTMLNSCATGVGVVNIDNGFGAAMLAGKILRLANR 250
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_015183036.1 (nickel pincer cofactor biosynthesis protein LarB [Microcoleus sp. PCC 7113] >AFZ18891.1 NCAIR mutase-like protein [Microcoleus sp. PCC 7113]) HSP 1 Score: 190.3 bits (482), Expect = 1.200e-44 Identity = 123/322 (38.20%), Postives = 163/322 (50.62%), Query Frame = 0 Query: 102 YDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPS---LGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 Y+SV FAK+D+ R RTG PE+I+G GKTP+Q+ I+ +M LH P V++A+R+ + +A L+E + ++Y R+ L P AP GL++++ AGT+DL VAEEAA AELCG +VQR++DVGVAGIHRL D I ++ V++ VAGM+GALP+VVAGL CPV+AVPTSVGYG GLAPLLTMLN+CA G+ VNIDNG GAA +A +ILR H+ Sbjct: 33 YESVGDFAKVDHHRTLRTGFPEVIWGPGKTPDQIAQIMEAM--------------------------------------------------------------RLHNP------VVMATRIEPDVFAQLQEKVP-----------------DVQYYSTARICALAP---------------AAPQPTYAGLISLISAGTSDLPVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLNNRDAIAQADVLIVVAGMEGALPSVVAGLADCPVVAVPTSVGYGASFGGLAPLLTMLNSCAAGIGVVNIDNGFGAAILAGQILRTAHK 254
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_055074644.1 (nickel pincer cofactor biosynthesis protein LarB [Pseudanabaena sp. 'Roaring Creek']) HSP 1 Score: 190.3 bits (482), Expect = 1.200e-44 Identity = 127/361 (35.18%), Postives = 177/361 (49.03%), Query Frame = 0 Query: 60 SIRSILSRLGQGTLNPSQAEXXXXXXXXXXXXXXXXXXXXXGYDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 ++R +L + +G L+P +A Y+SV FAKID+ R RTG PE+I+G GKTPEQ++ I+ M S +PL ++A+++S+E YA ++ S++G L Y P+ ++ L T G +T++ AGTADL +AEEAA ELCG V+R++DVGVAGIHRL + + I + V++ VAGM+GAL +VVAGL CP++AVPTS+GYG +GLAPLLTMLN+CA GV VNIDNG GAA +A KILR+ +R Sbjct: 4 NLRQLLETVAKGDLSPEKA---------------LEELKYLHYESVGDFAKIDHQRMLRTGFPEVIFGLGKTPEQIVQIMRVM----------------------------------------------------------ESKNPL----------VMATKISAEVYAQIQPSLRG-----------------LRYFPIAQICCL--------------GESTMQKEGTITIITAGTADLPIAEEAAITGELCGFVVKRLWDVGVAGIHRLLSHREAIADADVIIVVAGMEGALASVVAGLADCPIVAVPTSIGYGASFNGLAPLLTMLNSCATGVGVVNIDNGFGAAMLAGKILRLANR 250
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_017652047.1 (nickel pincer cofactor biosynthesis protein LarB [Fortiea contorta]) HSP 1 Score: 189.9 bits (481), Expect = 1.600e-44 Identity = 130/365 (35.62%), Postives = 168/365 (46.03%), Query Frame = 0 Query: 56 TPTSSIRSILSRLGQGTLNPSQAEXXXXXXXXXXXXXXXXXXXXXGYDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 T T ++RS+L + G L+P A Y+ V FAKID+ R+ RTG PE+I+G GKTPEQ+ I+ M +R H V++A+R+ Y AL+ ++G L Y + R+ + P G + ++ AGTADL VAEEAA AEL G VQR++DVGVAGIHRL I + V++ VAGM+GALP+VVAGL CPVIAVPTS+GYG GLAPLLTMLN+CAPGV VNIDNG GAA +A +ILR + Sbjct: 2 TQTEALRSLLEAVASGKLSPDNA---------------FDSLKDLAYEKVGEFAKIDHHRQLRTGFPEVIWGLGKTPEQIAQIMQVMRDR--------------------------------------------------------------------HSVVMATRIEPGVYKALQSQVRG-----------------LRYYDLARICAIAPPDIEPQFS------------GEIAILSAGTADLPVAEEAAVTAELSGFRVQRLWDVGVAGIHRLLNNRHVIDSASVLIVVAGMEGALPSVVAGLADCPVIAVPTSIGYGASFGGLAPLLTMLNSCAPGVGVVNIDNGFGAAVLAGQILRTAEK 254
BLAST of NO14G02980 vs. NCBI_GenBank
Match: BBC25561.1 (1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase [Pseudanabaena sp. ABRG5-3]) HSP 1 Score: 189.1 bits (479), Expect = 2.800e-44 Identity = 121/319 (37.93%), Postives = 165/319 (51.72%), Query Frame = 0 Query: 102 YDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILRVRHR 421 Y+SV FAKID+ R RTG PE+I+G GKTPEQ++ I+ M S +PL ++A+++S+ YA ++ S++G L+Y P+ ++ L T G +T++ AGTADL +AEEAA +ELCG V+R++DVGVAGIHRL + D I ++V++ VAGM+GAL +VVAGL CP++AVPTS+GYG +GLAPLLTMLN+CA GV VNIDNG GAA +A KIL RH+ Sbjct: 31 YESVGDFAKIDHHRNLRTGFPEVIFGLGKTPEQIVQIMRVM----------------------------------------------------------ESKNPL----------VMATKISAAVYAQIQPSLRG-----------------LQYFPLAQICCL--------------GESTMKKEGTITILTAGTADLPIAEEAAVTSELCGFTVKRLWDVGVAGIHRLLSHRDAIANANVIIVVAGMEGALASVVAGLADCPIVAVPTSIGYGASFNGLAPLLTMLNSCATGVGVVNIDNGFGAAMLAGKILH-RHQ 249
BLAST of NO14G02980 vs. NCBI_GenBank
Match: WP_009633291.1 (nickel pincer cofactor biosynthesis protein LarB [Synechocystis sp. PCC 7509]) HSP 1 Score: 187.6 bits (475), Expect = 8.100e-44 Identity = 129/361 (35.73%), Postives = 174/361 (48.20%), Query Frame = 0 Query: 56 TPTSSIRSILSRLGQGTLNPSQAEXXXXXXXXXXXXXXXXXXXXXGYDSVDSFAKIDYVREARTGLPEIIYGEGKTPEQLLAILHSMGERRRAQEEASGDLATTHVNDANPSEGNLVEMRSRVVTGGEGEEGQRAASADTTAPRLSSSSPLHRPAAAAHGVIVASRVSSEKYAALRESMKGEGGXXXXXXXXXXAYGTLEYMPVPRLLVLRPXXXXXXXXXXXXXXRTAPSLGLVTVMCAGTADLSVAEEAATVAELCGVEVQRVYDVGVAGIHRLFAALDTIKRSHVVVCVAGMDGALPTVVAGLLPCPVIAVPTSVGYGVGKDGLAPLLTMLNACAPGVACVNIDNGIGAAGMAVKILR 417 T ++++S+L + G ++P+ A GY++V FA+ID R RTG PE+I+G+ KTP+Q+ I+ +M LH P V++A+R++S YA L + G L+Y P R+ L P T G+++++ AGTADL VAEEAA A LCG +VQR++DVGVAGIHRL I ++V++ VAGM+GALP+VVAGL CPVIAVPTS+GYG GLAPLLTMLN+CA GV VNIDNG GAA +A +ILR Sbjct: 2 TQANNLQSLLESVAAGEVDPAVA---------------LEKFKHLGYETVGDFARIDSDRTRRTGFPEVIWGQDKTPDQIAQIMETM--------------------------------------------------------------RLHSP------VVMATRINSNVYAQLETLVTG-----------------LQYYPAARICALSPETV------------TPQYPGIISILAAGTADLPVAEEAAVTATLCGFQVQRLWDVGVAGIHRLLNNRHVIDSANVLIAVAGMEGALPSVVAGLADCPVIAVPTSIGYGANFGGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILR 250 The following BLAST results are available for this feature:
BLAST of NO14G02980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02980 ID=NO14G02980|Name=NO14G02980|organism=Nannochloropsis oceanica|type=gene|length=2571bpback to top protein sequence of NO14G02980.1 >NO14G02980.1-protein ID=NO14G02980.1-protein|Name=NO14G02980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top Synonyms
Publications
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