NO14G02280, NO14G02280 (gene) Nannochloropsis oceanica

Overview
NameNO14G02280
Unique NameNO14G02280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1593
Alignment locationchr14:686246..687838 -

Link to JBrowse

Properties
Property NameValue
Description40s ribosomal protein s2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:686246..687838 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
GO:0005198structural molecule activity
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR000851Ribosomal_S5
IPR013810Ribosomal_S5_N
IPR005324Ribosomal_S5_C
Homology
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_005855175.1 (small subunit ribosomal protein S2e [Nannochloropsis gaditana CCMP526] >EKU21178.1 small subunit ribosomal protein S2e [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 469.9 bits (1208), Expect = 7.000e-129
Identity = 232/239 (97.07%), Postives = 237/239 (99.16%), Query Frame = 0 
Query:  124 GWTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLASGKVEYARRKEVE 363
            GWTPVTKLGRLVKEGKIKSLEEIFLYSLPVKE+QIIDKFLAAPPPGV+APTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALG+ PYQEHTDFL+SGKVE+ RRKEVE
Sbjct:   43 GWTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEYQIIDKFLAAPPPGVVAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGKDPYQEHTDFLSSGKVEFTRRKEVE 281
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: EWM24580.1 (40s ribosomal protein s2 [Nannochloropsis gaditana])

HSP 1 Score: 469.9 bits (1208), Expect = 7.000e-129
Identity = 232/239 (97.07%), Postives = 237/239 (99.16%), Query Frame = 0 
Query:  124 GWTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLASGKVEYARRKEVE 363
            GWTPVTKLGRLVKEGKIKSLEEIFLYSLPVKE+QIIDKFLAAPPPGV+APTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALG+ PYQEHTDFL+SGKVE+ RRKEVE
Sbjct:   87 GWTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEYQIIDKFLAAPPPGVVAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGKDPYQEHTDFLSSGKVEFTRRKEVE 325
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: AGN29613.1 (40S ribosomal protein S2 [Acartia pacifica])

HSP 1 Score: 344.4 bits (882), Expect = 4.400e-91
Identity = 167/241 (69.29%), Postives = 201/241 (83.40%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLASG--KVEYARRKEVEY 364
            W PVTKLGRLVK+GKIKSLEEI+L+SLP+KEF+IID FL             L+DEV+KIMPVQKQT AGQRTRFKAFVAIGDY+GHVGLGVKC+KEVATAIRGAII+AKLSIVPVRRG+WG KIGKPHT+P KVTGKCGS+ VRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A+++TY +LTPDLW+ T   ++PYQEHTDFLA     + Y R+++ +Y
Sbjct:   53 WVPVTKLGRLVKDGKIKSLEEIYLFSLPIKEFEIIDHFLG----------PALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGFWGNKIGKPHTVPSKVTGKCGSIWVRLIPAPRGTGIVSAPVPKKLLQMAGIEDCYTSAKGSTGTLGNFAKATYAAIAQTYAFLTPDLWKETQFQKSPYQEHTDFLAKNHKPLGYQRQEQKQY 283
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: PVD39382.1 (hypothetical protein C0Q70_02012 [Pomacea canaliculata])

HSP 1 Score: 344.4 bits (882), Expect = 4.400e-91
Identity = 165/224 (73.66%), Postives = 191/224 (85.27%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFL 349
            W PVTKLGRLVK+GKIKSLEEI+L+SLP+KE +IID FL         P+  L+DEV+KIMPVQKQT AGQRTRFKAFVA+GDY+GHVGLGVKC+KEVATAIRGAII+AKLS++PVRRGYWG KIGKPHT+P KVTGKCGSV VRL+PAPRG G+V+APVPKKLL MAGI D YT+  G + TLGNF KA +SA+SKTY YLTPDLW+ T   +APYQE+TD+L
Sbjct:   48 WIPVTKLGRLVKDGKIKSLEEIYLFSLPIKECEIIDSFL---------PSGTLKDEVLKIMPVQKQTRAGQRTRFKAFVAVGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLTMAGIDDCYTSARGATATLGNFAKATYSAISKTYAYLTPDLWKETVFNKAPYQEYTDYL 262
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_001356343.1 (uncharacterized protein Dpse_GA19229 [Drosophila pseudoobscura pseudoobscura] >XP_002014464.1 GL19203 [Drosophila persimilis] >EAL33406.1 uncharacterized protein Dpse_GA19229 [Drosophila pseudoobscura pseudoobscura] >EDW28460.1 GL19203 [Drosophila persimilis])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 166/225 (73.78%), Postives = 192/225 (85.33%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLA 350
            W PVTKLGRLV+EGKIKSLEEI+LYSLP+KEF+IID FL           S LRDEV+KIMPVQKQT AGQRTRFKAFVAIGD +GH+GLGVKC+KEVATAIRGAII+AKLS+VPVRRGYWG KIGKPHT+P KVTGKCGSVSVRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A++KTY YLTPDLW+   LG  PYQ ++DFL+
Sbjct:   44 WVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG----------SALRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLS 258
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_001988687.1 (GH10440 [Drosophila grimshawi] >EDW03554.1 GH10440 [Drosophila grimshawi])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 166/225 (73.78%), Postives = 192/225 (85.33%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLA 350
            W PVTKLGRLV+EGKIKSLEEI+LYSLP+KEF+IID FL           S LRDEV+KIMPVQKQT AGQRTRFKAFVAIGD +GH+GLGVKC+KEVATAIRGAII+AKLS+VPVRRGYWG KIGKPHT+P KVTGKCGSVSVRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A++KTY YLTPDLW+   LG  PYQ ++DFL+
Sbjct:   44 WVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG----------SSLRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLS 258
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_002003073.1 (uncharacterized protein Dmoj_GI24366 [Drosophila mojavensis] >XP_017859310.1 PREDICTED: 40S ribosomal protein S2 [Drosophila arizonae] >EDW12515.1 uncharacterized protein Dmoj_GI24366 [Drosophila mojavensis])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 166/225 (73.78%), Postives = 192/225 (85.33%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLA 350
            W PVTKLGRLV+EGKIKSLEEI+LYSLP+KEF+IID FL           S LRDEV+KIMPVQKQT AGQRTRFKAFVAIGD +GH+GLGVKC+KEVATAIRGAII+AKLS+VPVRRGYWG KIGKPHT+P KVTGKCGSVSVRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A++KTY YLTPDLW+   LG  PYQ ++DFL+
Sbjct:   44 WVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG----------SSLRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLS 258
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_002052442.1 (uncharacterized protein Dvir_GJ21626 [Drosophila virilis] >EDW64597.1 uncharacterized protein Dvir_GJ21626 [Drosophila virilis])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 166/225 (73.78%), Postives = 192/225 (85.33%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLA 350
            W PVTKLGRLV+EGKIKSLEEI+LYSLP+KEF+IID FL           S LRDEV+KIMPVQKQT AGQRTRFKAFVAIGD +GH+GLGVKC+KEVATAIRGAII+AKLS+VPVRRGYWG KIGKPHT+P KVTGKCGSVSVRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A++KTY YLTPDLW+   LG  PYQ ++DFL+
Sbjct:   44 WVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG----------SALRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLS 258
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_017841727.1 (PREDICTED: 40S ribosomal protein S2 [Drosophila busckii] >ALC38327.1 RpS2 [Drosophila busckii])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 166/225 (73.78%), Postives = 192/225 (85.33%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLA 350
            W PVTKLGRLV+EGKIKSLEEI+LYSLP+KEF+IID FL           S LRDEV+KIMPVQKQT AGQRTRFKAFVAIGD +GH+GLGVKC+KEVATAIRGAII+AKLS+VPVRRGYWG KIGKPHT+P KVTGKCGSVSVRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A++KTY YLTPDLW+   LG  PYQ ++DFL+
Sbjct:   44 WVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG----------SSLRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLS 258
[Close]
BLAST of NO14G02280 vs. NCBI_GenBank
Match: XP_023177005.1 (40S ribosomal protein S2 [Drosophila hydei])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 166/225 (73.78%), Postives = 192/225 (85.33%), Query Frame = 0 
Query:  125 WTPVTKLGRLVKEGKIKSLEEIFLYSLPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFKAFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIGKPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTATTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLA 350
            W PVTKLGRLV+EGKIKSLEEI+LYSLP+KEF+IID FL           S LRDEV+KIMPVQKQT AGQRTRFKAFVAIGD +GH+GLGVKC+KEVATAIRGAII+AKLS+VPVRRGYWG KIGKPHT+P KVTGKCGSVSVRL+PAPRG G+V+APVPKKLL MAGI+D YT+  G++ TLGNF KA ++A++KTY YLTPDLW+   LG  PYQ ++DFL+
Sbjct:   44 WVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLG----------SSLRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLS 258
The following BLAST results are available for this feature:
BLAST of NO14G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855175.17.000e-12997.07small subunit ribosomal protein S2e [Nannochlorops... [more]
EWM24580.17.000e-12997.0740s ribosomal protein s2 [Nannochloropsis gaditana... [more]
AGN29613.14.400e-9169.2940S ribosomal protein S2 [Acartia pacifica][more]
PVD39382.14.400e-9173.66hypothetical protein C0Q70_02012 [Pomacea canalicu... [more]
XP_001356343.17.600e-9173.78uncharacterized protein Dpse_GA19229 [Drosophila p... [more]
XP_001988687.17.600e-9173.78GH10440 [Drosophila grimshawi] >EDW03554.1 GH10440... [more]
XP_002003073.17.600e-9173.78uncharacterized protein Dmoj_GI24366 [Drosophila m... [more]
XP_002052442.17.600e-9173.78uncharacterized protein Dvir_GJ21626 [Drosophila v... [more]
XP_017841727.17.600e-9173.78PREDICTED: 40S ribosomal protein S2 [Drosophila bu... [more]
XP_023177005.17.600e-9173.7840S ribosomal protein S2 [Drosophila hydei][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002444NSK002444Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02280.1NO14G02280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590371gene_5808Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100062g29gene5903Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02280.1NO14G02280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02280 ID=NO14G02280|Name=NO14G02280|organism=Nannochloropsis oceanica|type=gene|length=1593bp
ATCTCCTTCTGTCATGCCCTCCGCCCTTTTTCTCTGTTGCCTCTCTTGAA
CCGCACTTGATGCCCTTTCTGACCGCTCACTAAGCAAAGGTGTGTGACTG
AATAACACATGTGCAGGCACATTTGCTGGTGCGGTGGTTGAGGCGCGGAG
GGAGAGCGGATGGTGGGGAGGCTAGCTTCTGGCTTCGCCGACACCCGCCC
TCCCTCCAATGCCTTTGGGCGTCAGGCCATCACCACACTTACGCAACGCG
GGTGGCTTCAGCATGCAGACCATCATGATCATCATGTGTACAAACTGTGG
TTGCCTGGCATTCTCTTGGCTTCTATGCAATCAACGCAACTCACCCTCAC
TCATGCCTCCTCCCCCTCCCCTCTTCTCCCTCCCTCCGCCATCAACCCAC
ACAAACCGCACACAGTTGTTTCTTCCCCTACCCCAACATCATCCAAGCAT
GGAGGGCGGCGGCGACGTTGGACGCGGACGCGGCGGCTTCGGCCGAGGAC
GTGGAGACAGAGGAGGCGACCGTGGTCGTGGCCGTGGCCGCGGACGCGGG
CGTGGTGGGGACAAAGACGAGAAGGAGGGCTGGACCCCCGTGACCAAACT
CGGTCGCCTGGTGAAGGAGGGCAAGATCAAGAGCTTGGAGGAGATCTTCC
TTTACTCTCTGCCTGTCAAGGAGTTTCAGATCATCGACAAGTTCCTCGCT
GCCCCTCCCCCCGGGGTCCTCGCCCCTACCTCGGGCCTTCGCGACGAGGT
CATGAAGATCATGCCCGTGCAAAAGCAGACGTCCGCCGGGCAGCGCACGC
GTTTTAAGGCCTTCGTGGCCATTGGTGACTACGACGGACACGTCGGCCTC
GGTGTGAAGTGCGCCAAGGAAGTGGCCACAGCTATCCGAGGGGCGATCAT
CATGGCTAAGCTCTCCATCGTCCCTGTGCGCCGTGGGTACTGGGGTCGAA
AGATCGGGAAGCCCCATACCATCCCGGTGAAGGTTACGGGCAAATGCGGC
TCCGTCTCCGTGCGCCTCGTCCCGGCGCCCCGTGGTTGCGGCCTGGTCGC
TGCCCCCGTCCCGAAGAAGTTGTTGAACATGGCGGGGATCAAGGACGTGT
ATACGGCCACGACCGGTAACTCTCGCACGCTTGGAAATTTCGTCAAGGCC
GTCTTCTCAGCTCTTTCGAAGACCTACGGCTATTTGACCCCCGACCTGTG
GCAGCCGACGGCACTGGGGCAGGCCCCTTATCAAGAGCACACGGACTTTT
TGGCGAGCGGTAAAGTAGAGTATGCGCGACGCAAGGAAGTCGAATATTAA
GTAGGATCTTGCAGGGGCGCGGGATGGAGGGAAGAAGGGAGTGTGGGACG
GATAGGGCTTGACGGCATGCATTGCGTGACGTGGTGGCGGGTCTTCTGGA
GGATGGTATATGGTATGAGTCATGGAAAGGAAGGGAGGGGACGAGAGGCT
TTCGTGCGAGAGCCTTTTGTCTAGAATCAAAGGTATGGACATTCTTGTCG
TCCTTTTCTGGAGGTACCGACAGATGAAAGAAGAAGGAAAAAGCGTCATT
CAGTACAAGCAGACATAGTATACAACAACAATGGAGGGGCGGA
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protein sequence of NO14G02280.1

>NO14G02280.1-protein ID=NO14G02280.1-protein|Name=NO14G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=364bp
MPLGVRPSPHLRNAGGFSMQTIMIIMCTNCGCLAFSWLLCNQRNSPSLMP
PPPPLFSLPPPSTHTNRTQLFLPLPQHHPSMEGGGDVGRGRGGFGRGRGD
RGGDRGRGRGRGRGRGGDKDEKEGWTPVTKLGRLVKEGKIKSLEEIFLYS
LPVKEFQIIDKFLAAPPPGVLAPTSGLRDEVMKIMPVQKQTSAGQRTRFK
AFVAIGDYDGHVGLGVKCAKEVATAIRGAIIMAKLSIVPVRRGYWGRKIG
KPHTIPVKVTGKCGSVSVRLVPAPRGCGLVAAPVPKKLLNMAGIKDVYTA
TTGNSRTLGNFVKAVFSALSKTYGYLTPDLWQPTALGQAPYQEHTDFLAS
GKVEYARRKEVEY*
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Synonyms
Publications