NO14G02210, NO14G02210 (gene) Nannochloropsis oceanica

Overview
NameNO14G02210
Unique NameNO14G02210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3577
Alignment locationchr14:663981..667557 -

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Properties
Property NameValue
DescriptionSister chromatid cohesion protein dcc1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:663981..667557 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0031390Ctf18 RFC-like complex
GO:0031390Ctf18 RFC-like complex
Vocabulary: Biological Process
TermDefinition
GO:0007064mitotic sister chromatid cohesion
GO:0007064mitotic sister chromatid cohesion
Vocabulary: INTERPRO
TermDefinition
IPR019128Sister_chromatid_cohesion_Dcc1
Homology
BLAST of NO14G02210 vs. NCBI_GenBank
Match: EWM24590.1 (sister chromatid cohesion protein dcc1 [Nannochloropsis gaditana])

HSP 1 Score: 502.7 bits (1293), Expect = 1.200e-138
Identity = 255/384 (66.41%), Postives = 291/384 (75.78%), Query Frame = 0
Query:   66 TFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATATGNASFHYELKRSKPKQQLLRQLLGKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEPVLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK 450
            TFPLGL  GFESA+LR+MEA PEV+ AL Q   LRVVG+  + PAALVTE ATFE+CRVETSN+LLL PP+E   +I TA GN SFHYELKRSKPKQQLLRQLLG+G VWSLDELETRVQGSR EVLALLRQMNAL+VDG  ++WR VSEE+EVSP LDRLL EL++ GKSLEGV EEDC+ +LPDVE VL+ HCLKAYG P++    Q   +S                              R WTL+L KVA FKAHQIFQQGMSRPQ  +W R+ FFLEWE RLPG YRP+ E+LRG+A++E++GGE CLRYLPG TMPLDPT RLK+LF VRKKW+ EEM PYMLPLVP KK LEDFLLKHTRS+V     GGR YSA+
Sbjct:   57 TFPLGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHS-LPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: CBN74702.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 125.9 bits (315), Expect = 3.100e-25
Identity = 112/447 (25.06%), Postives = 182/447 (40.72%), Query Frame = 0
Query:   76 ESADLRIMEAPPEVVAAL---TQRQTLRVVGESRDQPAALVTENATFELCRVETSN---------------------------------MLLLVPPVETGANIATATGNASFHYELKRSKPKQQLLRQLL----------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEPVLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQ---------------QGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGE------ECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK 450
            ++ +L +++ P  ++  +     +  ++++G   D+ A LVT   TF+L + ETSN                                         E G     A G   F +EL +  P  + +R +L                G+    +L EL+TRVQ SR E+L  L++++A+E+DG   +WR V +   +  T D LLA ++     L+ VD + C+  LPD E +++ HCL+ Y  P++    Q  A S                                + LDL+KVAR +AHQI +                       G      F   W   +PG   P  +LL+G+A+ E    +        + Y+P   +P  P ERL  LF ++ KW + E+ PY    +        FLLK+TR++    G G + +SA+
Sbjct:   43 DNQNLVLLQVPESLLNEIGEDADKGLVKLIG-GEDEDAVLVTGGQTFKLTKAETSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGFEAVAAVG---FQFELSKKTPSLEQIRVILEACLYRGNVEEAATDRGRLEALTLAELQTRVQFSRRELLQGLKELDAVEIDG---RWRMV-DPALMERTADALLAAVVEEDIPLDKVDSKACIAALPDCESLVLEHCLRTYSLPSDNVEEQNGAPSETAPAAADSVADQTVAPAY-------------FRLDLAKVARLRAHQIMRAHEAEINXXXXXXXXXXXXHGSGGPISLGEFMDRWAASMPGVDTPSQDLLKGIALVETRDAKSEDKNASLVSYVPASGLPFSPAERLAALFRIKPKWPMAELEPY----ISEADRKAGFLLKNTRASTD-PGTGQKLFSAR 463          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: XP_016411815.1 (PREDICTED: sister chromatid cohesion protein DCC1 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 118.6 bits (296), Expect = 4.900e-23
Identity = 104/409 (25.43%), Postives = 173/409 (42.30%), Query Frame = 0
Query:   55 AESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANI-----------ATATGNASFHYELKRSKPKQQLLRQLL---------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAV 437
            A+  E D   +T+ L       S D  +ME    +   +   ++L + G+ +D+ A L TE+ T++L   +TSN+LL VP  +T   +           A   G ++ ++EL+R +P+ + L++LL                 G  +++D+L  R+Q SR E+ A L+ ++A E++G    WR +  + E+   L  +   + S   S   V    CL  L  +EP  +I HCL  YG   +    Q                                     + LD  KV R  A  + Q  +       +    F   W+  +P       + LRGLA+ ++    E +  L  E +P D  ER   LF++R+KW  +++ PY+  L   K+     L KH RS+V
Sbjct:   14 AKVKEEDLQPVTYCLSFGDNVSSGDYCLMELDDTLCKLIEAGKSLIIRGD-KDEHAVLCTEDKTYDLKIADTSNLLLFVPGCKTPDQLPDISASPQLMHAQIWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPAVGMQEEAPGLKYTMDDLLERIQASREEIEAHLQNVHACEIEG---FWRILDFDYEMK-LLGHVTQLVDSESWSFSKVPFSVCLEELGSLEPKAMIEHCLNCYGRRYSNEDGQV-----------------------------------IYALDEDKVCRATAQLLLQNAVK------FNLSEFQEVWQQSVPEGMSARLDQLRGLALLDRSSKPETISLLRIEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSSV 376          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: XP_018946913.1 (PREDICTED: sister chromatid cohesion protein DCC1 [Cyprinus carpio])

HSP 1 Score: 118.2 bits (295), Expect = 6.400e-23
Identity = 104/409 (25.43%), Postives = 173/409 (42.30%), Query Frame = 0
Query:   55 AESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANI-----------ATATGNASFHYELKRSKPKQQLLRQLL---------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAV 437
            A+  E D   +T+ L       S D  +ME    +   +   ++L + G+ +D+ A L +E+ T++L   +TSN+LL VP  +T   +           A   G ++ ++EL+R +P+ + L++LL                 G  +++D+L  R+Q SR E+ A L+ ++A E+DG    WR +  + E+   L  +   + S   S   V    CL  L  +EP  +I HCL  YG   +    Q                                     + LD  KV R  A  + Q  +       +    F   W+  +P       + LRGLA+ ++    E +  L  E +P D  ER   LF++R+KW  +++ PY+  L   K+     L KH RS+V
Sbjct:   14 AKVKEEDLQPVTYCLSFGDNVSSGDYCLMELDDTLCKHIEAGKSLIIRGD-KDEHAVLCSEDKTYDLKIADTSNLLLFVPGCKTPDQLPDISASPQLMHAQIWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPAVGMQEEAPGPKYTMDDLLERIQASREEIEAHLQNVHACEIDG---FWRILDFDYEMK-LLGHVTQLVDSESWSFSKVPLSVCLEELGSLEPKAMIEHCLNCYGRRYSNEDGQV-----------------------------------IYALDEDKVCRATAQLLLQNAVK------FNLSEFQEVWQQSVPEGMSARLDQLRGLALLDRSSKPETISLLRIEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSSV 376          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: XP_016337756.1 (PREDICTED: sister chromatid cohesion protein DCC1 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 117.9 bits (294), Expect = 8.400e-23
Identity = 103/409 (25.18%), Postives = 173/409 (42.30%), Query Frame = 0
Query:   55 AESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATAT-----------GNASFHYELKRSKPKQQLLRQLL---------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAV 437
            A+  E D   +T+ L       S D  +ME    +   +   ++L + G+ +D+ A L  E+ T++L   +TSN+LL VP  +T   +   +           G ++ ++EL+R +P+ + L++LL                 G  +++D+L  R+Q SR E+ A L+ ++A E+DG    WR ++ + E+   L  +   + S   S   V    CL  L  +EP  +I HCL  YG   +    Q                                     + LD  KV R  A  + Q  +       +    F   W+  +P       + LRGLA+ ++    E +  L  E +P D  ER   LF++R+KW  +++ PY+  L   K+     L KH RS+V
Sbjct:   14 AKVKEEDLQPVTYCLSFGDNVSSGDYCLMELDDTLCKLIEAGKSLIIRGD-KDERAVLCNEDKTYDLKIADTSNLLLFVPGCKTPDQLPDISASPQLLHVQIWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPAVGMQEEAPGPKYTMDDLLERIQASREEIEAHLQNVHACEIDG---FWRILAFDYEMK-LLGHVTQLVDSESWSFSKVPLSVCLEELGSLEPKAMIEHCLNCYGRRYSNEDGQV-----------------------------------IYALDEDKVCRATAQLLLQNAVK------FNLSEFQEVWQQSVPEGMSARLDQLRGLALLDRSSKPETISLLRIEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSSV 376          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: XP_001623591.1 (predicted protein [Nematostella vectensis] >EDO31491.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 116.3 bits (290), Expect = 2.400e-22
Identity = 101/402 (25.12%), Postives = 176/402 (43.78%), Query Frame = 0
Query:   77 SADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGAN--------IATATGNASFHY-ELKRSKPKQQLLRQLL-------------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEPVLI-HHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK 450
            S + R++E  P+++  L Q ++L + GE++++ A L +++ TFE+   +TSN LLL P  +T  +        I+    +    Y E++  +P+ Q LR+LL                   G    ++LD+L   VQGS  E+   L ++ ALE++G    WR + ++ E   T+ R+L  L       + V  ++C   L +++P  +  +CL+ YG   +G + +                                     + L   K+ RF A  +      RP  G +    F   W+  +P       E L+G+A+ +       + + P   +P +P  R  KLF  R KW  +E+ PY+  LV   + L   LLK+ RS  + D  G + Y++K
Sbjct:    2 SDEYRLLELSPKLLETLEQGESLVIRGENQEE-ALLFSKDTTFEVKLADTSNTLLLTPSCQTPKDNENSSPFLISYQVSSCHSEYLEVRSGRPRLQKLRRLLEQAMYKGPEYENKGDDMTDGIREKFTLDDLLNVVQGSEQEIKQKLDKLGALEING---HWRLLEKDYEERATM-RILTYLEEMAWDYQRVPLDECCDGLKELQPSFVTEYCLRHYGKLCDGCMEEV-----------------------------------HYHLLEDKICRFYAEYLL-----RP-AGRFNYHEFMESWQQSVPDGMTTTLEHLQGIALTDMKSHPPVIWHFPASDLPEEPEIRFNKLFKTRNKWTFDEIQPYIRDLVGTGQPLNSLLLKYARS--SKDDAGNKVYNSK 355          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: NP_001187663.1 (sister chromatid cohesion protein DCC1 [Ictalurus punctatus] >ADO28954.1 sister chromatid cohesion protein dcc1 [Ictalurus punctatus])

HSP 1 Score: 115.5 bits (288), Expect = 4.100e-22
Identity = 102/408 (25.00%), Postives = 173/408 (42.40%), Query Frame = 0
Query:   55 AESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATAT-----------GNASFHYELKRSKPKQQLLRQLLGKGTV--------------WSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAV 437
            A+  E D  S+T  L       S D  +ME    +   + + ++L + G+ +D+ A L +E+ T++L   +TSN+LL +P   T   ++ +            G A+ ++EL+R +PK + L++LL +                  ++++L  R+QGS+ E+ A L+ ++A ++DG    WR +  + E+   L  +   + S   SL  V    CL  L  +EP  +I HCL  YG   N    +                                     + LD  KV R  A  + Q  +       +    F   W+  +P       + L GLA+ +     E +  L  E +P D  ER   LFA+R+KW  +++ PY+  L   K+     L KH RS++
Sbjct:   14 AKLKEEDLNSVTHCLSFSDNVSSGDYCLMELDDTLCKHIEEGKSLTIRGD-KDEHAVLCSEDKTYDLKIADTSNLLLFLPGCRTPEQLSDSASDPKLIQAQIWGCANSYWELRRQRPKLKKLKKLLMENPYDGPPIGAQESPELKHTMEDLLERIQGSQKEIEAYLQGIHACKIDG---YWRILDFDYELK-LLGHVTQLVDSESWSLSKVPLSVCLEELAPLEPKAMIEHCLNCYGRRYNTEDGEV-----------------------------------MYALDEDKVCRAMAQMLLQNAVK------FNLSEFQEVWQQSVPEGVSTRLDQLSGLALVDCSSRPETISLLRVEDLPEDTLERFNALFAMREKWTQQDIEPYIRDLCGEKQTTGALLTKHARSSM 375          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: XP_022193542.1 (sister chromatid cohesion protein DCC1-like [Nilaparvata lugens])

HSP 1 Score: 115.5 bits (288), Expect = 4.100e-22
Identity = 112/443 (25.28%), Postives = 187/443 (42.21%), Query Frame = 0
Query:   53 GQAESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVP------PVETGAN-----------------IATATGNASFHYELKRSKPKQQLLRQLL-----------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGI----WERDNFFLEWETRLPGSYRPEAELLRGLAV-EEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK 450
            G A+  E D A  +  L +   F+  D R++E    +   L++ Q +   GE  ++ A L TEN T+E+   ETSN LLLVP      P + G N                     TG  + + EL++ KP+ + L +LL                     ++S ++L T VQ S  E+   LRQ+ A ++DG   KWR + + +     L ++   + S    L  V E + +  L D+ P V++ H    + SP      +  A                                  + L   KV RF A  + +   +          ++   F   W+  +P       + L GLAV ++  G    ++ LP +++P   TERL++LF++R++W L+E+ PY+ P+     D+   L+KH RS ++    G R Y+A+
Sbjct:   18 GHAKLAEDDLAPQSQALFVSDSFD--DYRLLELNSSIQTNLSEGQRVVFQGEKHEK-AVLCTENETYEILEAETSNTLLLVPELIFALPAKDGVNQNGNGAVGEQNGTRHLSSTVITGVFNSYLELRKMKPRLRKLEELLSCSEYRGSELEEEVLARADSRLYSREDLLTLVQASSNELDEGLRQIAACQIDG---KWR-LLDFDYCFRVLSQIQNLVDSNSWPLNAVPENETVETLKDIFPEVIVRHVFHQFTSPQYERNEEGDA---------------------------------LFELTEDKVCRFLAEALLRPLANGDHNDAACSGFDLQQFLAAWQHSVPEGMETNVQQLAGLAVIDDSAGKTPQVKLLPEKSLPEGATERLQQLFSIRQQWTLDEIQPYIEPVAVNAADVNRLLMKHARSFMS---NGKRCYTAR 417          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: XP_022202619.1 (sister chromatid cohesion protein DCC1-like [Nilaparvata lugens])

HSP 1 Score: 115.5 bits (288), Expect = 4.100e-22
Identity = 112/443 (25.28%), Postives = 187/443 (42.21%), Query Frame = 0
Query:   53 GQAESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVP------PVETGAN-----------------IATATGNASFHYELKRSKPKQQLLRQLL-----------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGI----WERDNFFLEWETRLPGSYRPEAELLRGLAV-EEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK 450
            G A+  E D A  +  L +   F+  D R++E    +   L++ Q +   GE  ++ A L TEN T+E+   ETSN LLLVP      P + G N                     TG  + + EL++ KP+ + L +LL                     ++S ++L T VQ S  E+   LRQ+ A ++DG   KWR + + +     L ++   + S    L  V E + +  L D+ P V++ H    + SP      +  A                                  + L   KV RF A  + +   +          ++   F   W+  +P       + L GLAV ++  G    ++ LP +++P   TERL++LF++R++W L+E+ PY+ P+     D+   L+KH RS ++    G R Y+A+
Sbjct:   19 GHAKLAEDDLAPQSQALFVSDSFD--DYRLLELNSSIQTNLSEGQRVVFQGEKHEK-AVLCTENETYEILEAETSNTLLLVPELIFALPAKDGVNQNGNGAVGEQNGTRHLSSTVITGVFNSYLELRKMKPRLRKLEELLSCSEYRGSELEEEVLARADSRLYSREDLLTLVQASSNELDEGLRQIAACQIDG---KWR-LLDFDYCFRVLSQIQNLVDSNSWPLNAVPENETVETLKDIFPEVIVRHVFHQFTSPQYERNEEGDA---------------------------------LFELTEDKVCRFLAEALLRPLANGDHNDAACSGFDLQQFLAAWQHSVPEGMETNVQQLAGLAVIDDSAGKTPQVKLLPEKSLPEGATERLQQLFSIRQQWTLDEIQPYIEPVAVNAADVNRLLMKHARSFMS---NGKRCYTAR 418          
BLAST of NO14G02210 vs. NCBI_GenBank
Match: NP_001004611.1 (sister chromatid cohesion protein DCC1 [Danio rerio] >Q66I84.1 RecName: Full=Sister chromatid cohesion protein DCC1; AltName: Full=Defective in sister chromatid cohesion protein 1 homolog >AAH81483.1 Defective in sister chromatid cohesion 1 homolog (S. cerevisiae) [Danio rerio] >AAI65209.1 Dscc1 protein [Danio rerio])

HSP 1 Score: 115.2 bits (287), Expect = 5.400e-22
Identity = 101/409 (24.69%), Postives = 174/409 (42.54%), Query Frame = 0
Query:   55 AESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATAT-----------GNASFHYELKRSKPKQQLLRQLL---------------GKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEP-VLIHHCLKAYGSPNNGHVSQTPAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAV 437
            A+  E D   +T+ L       S D  +ME    +   +   ++L + G+ +D+ A L +E+ T++L   +TSN+LL VP  +T   ++              G ++ ++EL+R +P+ + L++LL                 G  +S+++L  R+Q S+ E+ A L  ++A E+DG    WR +  + E+   L  +   + S   S   V    CL  L  +EP  +I HCL  YG  ++   +Q                                     + LD  KV R  A  + Q  +       +    F   W+  +P       + LRGLA+ ++    E +  L  E +P D  ER   LF++R+KW  +++ PY+  L   K+     L KH RS++
Sbjct:   14 AKVKEEDLQPVTYCLSFGDNVSSGDYCLMEVDENLCKHIESGKSLIIRGD-KDEHAVLCSEDKTYDLKIADTSNLLLFVPGCKTPDQLSDIPASPQLMHTQIWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPPVGMQEEAPGLKYSMEDLLERIQASKEELEAHLGNVHACEIDG---FWRILDFDYEMK-LLGHVTQLVDSESWSFSKVPLSVCLEELGSLEPKAMIEHCLNCYGRRHSDEDNQV-----------------------------------MYALDEDKVCRATAQLLLQNAVK------FNLSEFQEVWQQSVPEGMGTRLDQLRGLALIDRSSKPETISLLRVEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSSM 376          
The following BLAST results are available for this feature:
BLAST of NO14G02210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24590.11.200e-13866.41sister chromatid cohesion protein dcc1 [Nannochlor... [more]
CBN74702.13.100e-2525.06conserved unknown protein [Ectocarpus siliculosus][more]
XP_016411815.14.900e-2325.43PREDICTED: sister chromatid cohesion protein DCC1 ... [more]
XP_018946913.16.400e-2325.43PREDICTED: sister chromatid cohesion protein DCC1 ... [more]
XP_016337756.18.400e-2325.18PREDICTED: sister chromatid cohesion protein DCC1 ... [more]
XP_001623591.12.400e-2225.12predicted protein [Nematostella vectensis] >EDO314... [more]
NP_001187663.14.100e-2225.00sister chromatid cohesion protein DCC1 [Ictalurus ... [more]
XP_022193542.14.100e-2225.28sister chromatid cohesion protein DCC1-like [Nilap... [more]
XP_022202619.14.100e-2225.28sister chromatid cohesion protein DCC1-like [Nilap... [more]
NP_001004611.15.400e-2224.69sister chromatid cohesion protein DCC1 [Danio reri... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002438NSK002438Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02210.1NO14G02210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590347gene_5799Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100062g20gene5896Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02210.1NO14G02210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02210 ID=NO14G02210|Name=NO14G02210|organism=Nannochloropsis oceanica|type=gene|length=3577bp
AGGCCCCGCCCCGGTCGCCAAGAAGGCAAGCTTCGGCATCGGCGATCAGC
ACGCTTCTTTCTGCACACGACGACCATGGCACCCCCCGACCCAAACACCA
CCACCACTGTACAAGCCAACTCACACAAATGTAGCAGCAGCAACAACAAC
AAGAACAATAAATACAACAGCAGCAAGCGCCGTCGCCTCCTGCAAGAAGC
TGTGGCGGAAGCAGCCTCATCTGCCACGTGTGGACAAGCTGAAAGCAACG
AGATGGACCCCGCCTCTATAACCTTTCCCTTGGGCTTGGAAGTAGGCTTC
GAGTCCGCTGACTTGCGGATCATGGAAGCACCTCCCGAGGTCGTGGCCGC
TTTGACACAAAGACAGACCTTGCGGGTGGTGGGCGAGTCGCGGGATCAAC
CGGCAGCACTAGTGACGGAGAACGCGACCTTCGAATTGTGTCGGGTCGAG
ACATCCAACATGCTTCTCCTCGTCCCGCCCGTGGAGACCGGGGCAAATAT
AGCGACAGCCACGGGGAATGCCTCGTTTCATTATGAACTTAAACGAAGCA
AGCCAAAACAGCAATTGTTGAGGCAGCTTCTTGGGAAGGGAACGGTGTGG
TCGTTGGACGAGCTGGAGACGCGGGTACAGGGCAGCCGGGTTGAGGTGTT
GGCGTTGCTGCGTCAGATGAATGCCTTGGAGGTGGATGGTGACGTCCAGA
AATGGCGGGGTGTGAGCGAGGAGGAGGAAGTGTCTCCGACCTTGGATCGT
CTGTTGGCGGAGCTAATAAGCGCGGGCAAGAGCTTGGAGGGAGTTGATGA
GGAGGACTGCTTGCGGATGCTGgtaggttttgttttgtggttgttatacc
cctctcctgtacttcccttcattttttgaaatcacctctcattccaccat
cactctgtctttcctttcatcttcactacagCCTGACGTCGAACCTGTTC
TGATCCATCATTGCCTCAAAGCCTATGGGAGCCCTAACAACGGCCACGTT
TCACAAACCCCAGCAAAATCAGCTACCGCAGCAGCAGCAGTAGCCGTGAG
CTCAACCGCACCCGAACAGCCGCAGCAGCAGCAGCAGCAGCTGTCACCAC
CGCAGCAGAAGCGTACGTGGACGTTGGACCTAAGCAAGGTCGCTCGTTTC
AAGGCCCACCAGATTTTCCAGCAAGGGATGAGTCGTCCCCAGAGAGGGAT
CTGGGAGCGTGATAATTTCTTCTTAGAATGGGAGACGAGGCTGCCAGGTT
CTTATCGGCCTGAAGCTGAATTGTTGAGGGGGTTGGCGGTAGAGGAGAAG
GTGGGGGGGGAGGAGTGCCTCCGGTACCTTCCGGGTGAGACAATGCCTTT
GGATCCGACAGAGAGGTTAAAGAAATTGTTTGCCGTTAGAAAGAAGTGGC
AGTTGGAAGAGATGATGCCCTACATGCTGCCTCTGGTGCCGGGGAAGAAA
GACTTGGAAGACTTTTTGTTGAAGCACACACGGTCGGCCGTGGCAGTGGA
CGGGGTGGGTGGGAGAACGTACTCTGCAAAGTGACAAGGGAAGGGAGAAA
CGGAGGAGGCAAAAGAGAGAAATAGTGCAAAATGAATCAGACATCTTGAT
TTAATGATTGGATTCTTTTGTTTATTGATGTGTGCGCCTTATTTATATTT
CTCATTTCCGTTATTGCTCTTGCTATCGACATGACGTTAAGCTATGAATA
CATAAAGATTTTCATTGTTACACACGCTAACATGTACAAGACCAATGATA
TGTCAGCTCCATGCGGTCATATGAGTAGTGTAACGTGGCGTGTCTCTGTT
GCTCGTCCCACTCCCCCTCATTCTTCCCTCCCTCCCTCCCATCACTCCCC
TCATATGTTCGGGTTGAAATGAAAAAAATCAAAGAGCTTTTTAGCTGCTG
CTTCTGATTCCAAGAGCATATGCAACTCCGCGATACTCATTCTACTTAAA
GCCGCGAGGCTCTCTACTTTATTCATAATCGCTCGGAAGTTGTTGACCGT
CACTCCGGGTAGCTTGAGGAGTAAGTCTTGGGCAGTGAGGTGCTTCCCGG
CGTCGCTGTCTTCTTCCCCCGTACCACCGCCGGCGGTCTGGGAAAAGGTA
GAGGGAAAGAGGGAAAGAGGGAGGGAAGCGAGTTAGGATGACGATGAGCA
AGACAGAAACACAGGCCCCGGCTTTGATGGAGGGAGAAAGAGGACAAAGT
AGTAGAGACAAGAACATACGGCTGTCCGTTGTTCTACCATATGACCAGAG
ACATACCACTGCTTTCCTGACATCTACGGGTGCATTACCCGCCTTGAGGA
CCTGTTGCGTATGAAAAGACGACGTAAGAGGAAACGAAGTGAAAAGAATC
AGTCCGGGCAAGTCCCTGCGCCGGCACCATAAATCCAAAAGAGGAAGGGA
GGGTGGAATGAAGGGAGGGTGAAATTGAGGGAATGAGGGAAAGGCTCACC
TTGAACAACAAAACCGTCTGATGTGGGTTCCGACTCCACAAAATCCGCAA
CGCCGGAAATTTCAACGTCAAGAGCACCATCTTTGAAATGATGTTGCTCT
GTTGGATGTCATCCCCTATGTCCCCGGGGGCCTGCAACGAGAAGGACTTA
TCATCCTGGAATTCGATTAAGAGGGTCGCCACCTTGTAGTGTCTTAGCAT
GTTCTCAACCTGCCCATACAATCGCCCACTTCCGAAAGACCCGAACAAAT
CAGAGACTGACTTCCGCTCAATCACTATCTCGGGGGTGAGGACAAAGTCT
CCGATGGTGAGAGTGAGGGGGAGGATGGTCATTCCTCCGTTGTGGAGGAG
GTTGGGAAGGGAGGAGCGAAATTCGCGGATATCCACGACGACTCTAAGGC
AGGAGGAGGAAGAGGAAGAAGGGAGGGAGGAGGCGTCGCGAGTGACCAGA
CGGGTGTCGGCGACAAGTTTGTCAATGTAGGAGCCGGGGGTGGGGAGGGG
GGTCTCGTATAGACTAGTTGGCATGACCATGTGCTTCTTCTCTTGAACCA
GGCGTTCAAAGGCCTCCTTCTCACGGGTCAGCGCGGAGAGGTAGCGTTGT
TCTTCCACCGATTTCTCGTACACTATAAAATACACCTTCAGTGTCTCGGA
CATGGGGCGACGGGCTTGGTGCACCTCCACTTCCCGCACAAATTGAGCGT
CAGGATCGTACAACACCACCGCGTCCGGGGAGACCTCATCCAACACATTC
ATATTGGTATACGCCTGTCCATACGTGATAATAAATACCTGCCCCCACTT
CCCTTGTCCTCCCTCCTTCCTTCCCTCACCATCCTTGCCTTCGTCACCGC
TGCTACTGCTGCTGCTGTTGCTGCTTCCACCCATGCGATCAAACAGGTCT
TGAGCCATGTTGTACTTATTCTTCTCCCCCCCCCCTTTCCTTGCCATGCA
CGCTTCCGCTTTTGCAGGACCTTGCCCTTCCCCTTCCCGATAGTGATAGT
AGCAGCAGCAGTTTCTTCTCGTCCTCCTCCCCGTCTCAGTCCCCTCCCAC
CCTTGCGGGCCTTCCCTCCTCCTCGCCCGCCTTTTGCGGTGGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCA
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protein sequence of NO14G02210.1

>NO14G02210.1-protein ID=NO14G02210.1-protein|Name=NO14G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MAPPDPNTTTTVQANSHKCSSSNNNKNNKYNSSKRRRLLQEAVAEAASSA
TCGQAESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLR
VVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATATGNAS
FHYELKRSKPKQQLLRQLLGKGTVWSLDELETRVQGSRVEVLALLRQMNA
LEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLP
DVEPVLIHHCLKAYGSPNNGHVSQTPAKSATAAAAVAVSSTAPEQPQQQQ
QQLSPPQQKRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWE
TRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFA
VRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK*
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Synonyms
Publications