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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:663981..667557 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G02210.1 vs.
Match: EWM24590.1 (sister chromatid cohesion protein dcc1 [Nannochloropsis gaditana]) HSP 1 Score: 507.3 bits (1305), Expect = 4.900e-140 Identity = 275/460 (59.78%), Postives = 329/460 (71.52%), Query Frame = 0
Query: 1 MAPPDPNTTTTVQANSHKCSSSNNNKNNKYNSSKRRRLLQEAVAEAASSATCGQAESNEMDPAS----------ITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLRVVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATATGNASFHYELKRSKPKQQLLRQLLGKGTVWSLDELETRVQGSRVEVLALLRQMNALEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLPDVEPVLIHHCLKAYGSPNNGHVSQTPAKSATAAAAVAVSSTAPEQPQQQQQQLSPPQQK-RTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWETRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFAVRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK 450
MAPPD + + T KRRRL+++ AA + G +N DP TFPLGL GFESA+LR+MEA PEV+ AL Q LRVVG+ + PAALVTE ATFE+CRVETSN+LLL PP+E +I TA GN SFHYELKRSKPKQQLLRQLLG+G VWSLDELETRVQGSR EVLALLRQMNAL+VDG ++WR VSEE+EVSP LDRLL EL++ GKSLEGV EEDC+ +LPDVE VL+ HCLKAYG P++ + + ++ +T+ V S+ A ++ + + Q + R WTL+L KVA FKAHQIFQQGMSRPQ +W R+ FFLEWE RLPG YRP+ E+LRG+A++E++GGE CLRYLPG TMPLDPT RLK+LF VRKKW+ EEM PYMLPLVP KK LEDFLLKHTRS+V GGR YSA+
Sbjct: 1 MAPPDVSASVTPLPRH----------------GKRRRLVEDV---AAGRTSLGPGPANAGDPVGNKEGASHAGMATFPLGLAKGFESAELRLMEATPEVLDALGQGANLRVVGDGLEHPAALVTETATFEMCRVETSNLLLLFPPIEKVGDIGTAAGNVSFHYELKRSKPKQQLLRQLLGEGRVWSLDELETRVQGSRAEVLALLRQMNALQVDGAGKRWRAVSEEKEVSPILDRLLTELMARGKSLEGVAEEDCVALLPDVETVLVQHCLKAYGDPHS--LPEQDSQQSTSVERVGPSALAHGPLEEGSTEAALEQSRGRRWTLNLGKVAAFKAHQIFQQGMSRPQGAVWTREAFFLEWEARLPGLYRPDPEVLRGIALKEEIGGEACLRYLPGVTMPLDPTGRLKRLFTVRKKWRFEEMEPYMLPLVPEKKTLEDFLLKHTRSSVEAGEGGGRIYSAR 439
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G02210.1 ID=NO14G02210.1|Name=NO14G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=3468bp AGGCCCCGCCCCGGTCGCCAAGAAGGCAAGCTTCGGCATCGGCGATCAGC ACGCTTCTTTCTGCACACGACGACCATGGCACCCCCCGACCCAAACACCA CCACCACTGTACAAGCCAACTCACACAAATGTAGCAGCAGCAACAACAAC AAGAACAATAAATACAACAGCAGCAAGCGCCGTCGCCTCCTGCAAGAAGC TGTGGCGGAAGCAGCCTCATCTGCCACGTGTGGACAAGCTGAAAGCAACG AGATGGACCCCGCCTCTATAACCTTTCCCTTGGGCTTGGAAGTAGGCTTC GAGTCCGCTGACTTGCGGATCATGGAAGCACCTCCCGAGGTCGTGGCCGC TTTGACACAAAGACAGACCTTGCGGGTGGTGGGCGAGTCGCGGGATCAAC CGGCAGCACTAGTGACGGAGAACGCGACCTTCGAATTGTGTCGGGTCGAG ACATCCAACATGCTTCTCCTCGTCCCGCCCGTGGAGACCGGGGCAAATAT AGCGACAGCCACGGGGAATGCCTCGTTTCATTATGAACTTAAACGAAGCA AGCCAAAACAGCAATTGTTGAGGCAGCTTCTTGGGAAGGGAACGGTGTGG TCGTTGGACGAGCTGGAGACGCGGGTACAGGGCAGCCGGGTTGAGGTGTT GGCGTTGCTGCGTCAGATGAATGCCTTGGAGGTGGATGGTGACGTCCAGA AATGGCGGGGTGTGAGCGAGGAGGAGGAAGTGTCTCCGACCTTGGATCGT CTGTTGGCGGAGCTAATAAGCGCGGGCAAGAGCTTGGAGGGAGTTGATGA GGAGGACTGCTTGCGGATGCTGCCTGACGTCGAACCTGTTCTGATCCATC ATTGCCTCAAAGCCTATGGGAGCCCTAACAACGGCCACGTTTCACAAACC CCAGCAAAATCAGCTACCGCAGCAGCAGCAGTAGCCGTGAGCTCAACCGC ACCCGAACAGCCGCAGCAGCAGCAGCAGCAGCTGTCACCACCGCAGCAGA AGCGTACGTGGACGTTGGACCTAAGCAAGGTCGCTCGTTTCAAGGCCCAC CAGATTTTCCAGCAAGGGATGAGTCGTCCCCAGAGAGGGATCTGGGAGCG TGATAATTTCTTCTTAGAATGGGAGACGAGGCTGCCAGGTTCTTATCGGC CTGAAGCTGAATTGTTGAGGGGGTTGGCGGTAGAGGAGAAGGTGGGGGGG GAGGAGTGCCTCCGGTACCTTCCGGGTGAGACAATGCCTTTGGATCCGAC AGAGAGGTTAAAGAAATTGTTTGCCGTTAGAAAGAAGTGGCAGTTGGAAG AGATGATGCCCTACATGCTGCCTCTGGTGCCGGGGAAGAAAGACTTGGAA GACTTTTTGTTGAAGCACACACGGTCGGCCGTGGCAGTGGACGGGGTGGG TGGGAGAACGTACTCTGCAAAGTGACAAGGGAAGGGAGAAACGGAGGAGG CAAAAGAGAGAAATAGTGCAAAATGAATCAGACATCTTGATTTAATGATT GGATTCTTTTGTTTATTGATGTGTGCGCCTTATTTATATTTCTCATTTCC GTTATTGCTCTTGCTATCGACATGACGTTAAGCTATGAATACATAAAGAT TTTCATTGTTACACACGCTAACATGTACAAGACCAATGATATGTCAGCTC CATGCGGTCATATGAGTAGTGTAACGTGGCGTGTCTCTGTTGCTCGTCCC ACTCCCCCTCATTCTTCCCTCCCTCCCTCCCATCACTCCCCTCATATGTT CGGGTTGAAATGAAAAAAATCAAAGAGCTTTTTAGCTGCTGCTTCTGATT CCAAGAGCATATGCAACTCCGCGATACTCATTCTACTTAAAGCCGCGAGG CTCTCTACTTTATTCATAATCGCTCGGAAGTTGTTGACCGTCACTCCGGG TAGCTTGAGGAGTAAGTCTTGGGCAGTGAGGTGCTTCCCGGCGTCGCTGT CTTCTTCCCCCGTACCACCGCCGGCGGTCTGGGAAAAGGTAGAGGGAAAG AGGGAAAGAGGGAGGGAAGCGAGTTAGGATGACGATGAGCAAGACAGAAA CACAGGCCCCGGCTTTGATGGAGGGAGAAAGAGGACAAAGTAGTAGAGAC AAGAACATACGGCTGTCCGTTGTTCTACCATATGACCAGAGACATACCAC TGCTTTCCTGACATCTACGGGTGCATTACCCGCCTTGAGGACCTGTTGCG TATGAAAAGACGACGTAAGAGGAAACGAAGTGAAAAGAATCAGTCCGGGC AAGTCCCTGCGCCGGCACCATAAATCCAAAAGAGGAAGGGAGGGTGGAAT GAAGGGAGGGTGAAATTGAGGGAATGAGGGAAAGGCTCACCTTGAACAAC AAAACCGTCTGATGTGGGTTCCGACTCCACAAAATCCGCAACGCCGGAAA TTTCAACGTCAAGAGCACCATCTTTGAAATGATGTTGCTCTGTTGGATGT CATCCCCTATGTCCCCGGGGGCCTGCAACGAGAAGGACTTATCATCCTGG AATTCGATTAAGAGGGTCGCCACCTTGTAGTGTCTTAGCATGTTCTCAAC CTGCCCATACAATCGCCCACTTCCGAAAGACCCGAACAAATCAGAGACTG ACTTCCGCTCAATCACTATCTCGGGGGTGAGGACAAAGTCTCCGATGGTG AGAGTGAGGGGGAGGATGGTCATTCCTCCGTTGTGGAGGAGGTTGGGAAG GGAGGAGCGAAATTCGCGGATATCCACGACGACTCTAAGGCAGGAGGAGG AAGAGGAAGAAGGGAGGGAGGAGGCGTCGCGAGTGACCAGACGGGTGTCG GCGACAAGTTTGTCAATGTAGGAGCCGGGGGTGGGGAGGGGGGTCTCGTA TAGACTAGTTGGCATGACCATGTGCTTCTTCTCTTGAACCAGGCGTTCAA AGGCCTCCTTCTCACGGGTCAGCGCGGAGAGGTAGCGTTGTTCTTCCACC GATTTCTCGTACACTATAAAATACACCTTCAGTGTCTCGGACATGGGGCG ACGGGCTTGGTGCACCTCCACTTCCCGCACAAATTGAGCGTCAGGATCGT ACAACACCACCGCGTCCGGGGAGACCTCATCCAACACATTCATATTGGTA TACGCCTGTCCATACGTGATAATAAATACCTGCCCCCACTTCCCTTGTCC TCCCTCCTTCCTTCCCTCACCATCCTTGCCTTCGTCACCGCTGCTACTGC TGCTGCTGTTGCTGCTTCCACCCATGCGATCAAACAGGTCTTGAGCCATG TTGTACTTATTCTTCTCCCCCCCCCCTTTCCTTGCCATGCACGCTTCCGC TTTTGCAGGACCTTGCCCTTCCCCTTCCCGATAGTGATAGTAGCAGCAGC AGTTTCTTCTCGTCCTCCTCCCCGTCTCAGTCCCCTCCCACCCTTGCGGG CCTTCCCTCCTCCTCGCCCGCCTTTTGCGGTGGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCA back to topprotein sequence of NO14G02210.1 >NO14G02210.1-protein ID=NO14G02210.1-protein|Name=NO14G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp MAPPDPNTTTTVQANSHKCSSSNNNKNNKYNSSKRRRLLQEAVAEAASSA TCGQAESNEMDPASITFPLGLEVGFESADLRIMEAPPEVVAALTQRQTLR VVGESRDQPAALVTENATFELCRVETSNMLLLVPPVETGANIATATGNAS FHYELKRSKPKQQLLRQLLGKGTVWSLDELETRVQGSRVEVLALLRQMNA LEVDGDVQKWRGVSEEEEVSPTLDRLLAELISAGKSLEGVDEEDCLRMLP DVEPVLIHHCLKAYGSPNNGHVSQTPAKSATAAAAVAVSSTAPEQPQQQQ QQLSPPQQKRTWTLDLSKVARFKAHQIFQQGMSRPQRGIWERDNFFLEWE TRLPGSYRPEAELLRGLAVEEKVGGEECLRYLPGETMPLDPTERLKKLFA VRKKWQLEEMMPYMLPLVPGKKDLEDFLLKHTRSAVAVDGVGGRTYSAK* back to topmRNA from alignment at chr14:663981..667557- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G02210.1 ID=NO14G02210.1|Name=NO14G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=3577bp|location=Sequence derived from alignment at chr14:663981..667557- (Nannochloropsis oceanica) AGGCCCCGCCCCGGTCGCCAAGAAGGCAAGCTTCGGCATCGGCGATCAGC
ACGCTTCTTTCTGCACACGACGACCATGGCACCCCCCGACCCAAACACCA
CCACCACTGTACAAGCCAACTCACACAAATGTAGCAGCAGCAACAACAAC
AAGAACAATAAATACAACAGCAGCAAGCGCCGTCGCCTCCTGCAAGAAGC
TGTGGCGGAAGCAGCCTCATCTGCCACGTGTGGACAAGCTGAAAGCAACG
AGATGGACCCCGCCTCTATAACCTTTCCCTTGGGCTTGGAAGTAGGCTTC
GAGTCCGCTGACTTGCGGATCATGGAAGCACCTCCCGAGGTCGTGGCCGC
TTTGACACAAAGACAGACCTTGCGGGTGGTGGGCGAGTCGCGGGATCAAC
CGGCAGCACTAGTGACGGAGAACGCGACCTTCGAATTGTGTCGGGTCGAG
ACATCCAACATGCTTCTCCTCGTCCCGCCCGTGGAGACCGGGGCAAATAT
AGCGACAGCCACGGGGAATGCCTCGTTTCATTATGAACTTAAACGAAGCA
AGCCAAAACAGCAATTGTTGAGGCAGCTTCTTGGGAAGGGAACGGTGTGG
TCGTTGGACGAGCTGGAGACGCGGGTACAGGGCAGCCGGGTTGAGGTGTT
GGCGTTGCTGCGTCAGATGAATGCCTTGGAGGTGGATGGTGACGTCCAGA
AATGGCGGGGTGTGAGCGAGGAGGAGGAAGTGTCTCCGACCTTGGATCGT
CTGTTGGCGGAGCTAATAAGCGCGGGCAAGAGCTTGGAGGGAGTTGATGA
GGAGGACTGCTTGCGGATGCTGGTAGGTTTTGTTTTGTGGTTGTTATACC
CCTCTCCTGTACTTCCCTTCATTTTTTGAAATCACCTCTCATTCCACCAT
CACTCTGTCTTTCCTTTCATCTTCACTACAGCCTGACGTCGAACCTGTTC
TGATCCATCATTGCCTCAAAGCCTATGGGAGCCCTAACAACGGCCACGTT
TCACAAACCCCAGCAAAATCAGCTACCGCAGCAGCAGCAGTAGCCGTGAG
CTCAACCGCACCCGAACAGCCGCAGCAGCAGCAGCAGCAGCTGTCACCAC
CGCAGCAGAAGCGTACGTGGACGTTGGACCTAAGCAAGGTCGCTCGTTTC
AAGGCCCACCAGATTTTCCAGCAAGGGATGAGTCGTCCCCAGAGAGGGAT
CTGGGAGCGTGATAATTTCTTCTTAGAATGGGAGACGAGGCTGCCAGGTT
CTTATCGGCCTGAAGCTGAATTGTTGAGGGGGTTGGCGGTAGAGGAGAAG
GTGGGGGGGGAGGAGTGCCTCCGGTACCTTCCGGGTGAGACAATGCCTTT
GGATCCGACAGAGAGGTTAAAGAAATTGTTTGCCGTTAGAAAGAAGTGGC
AGTTGGAAGAGATGATGCCCTACATGCTGCCTCTGGTGCCGGGGAAGAAA
GACTTGGAAGACTTTTTGTTGAAGCACACACGGTCGGCCGTGGCAGTGGA
CGGGGTGGGTGGGAGAACGTACTCTGCAAAGTGACAAGGGAAGGGAGAAA
CGGAGGAGGCAAAAGAGAGAAATAGTGCAAAATGAATCAGACATCTTGAT
TTAATGATTGGATTCTTTTGTTTATTGATGTGTGCGCCTTATTTATATTT
CTCATTTCCGTTATTGCTCTTGCTATCGACATGACGTTAAGCTATGAATA
CATAAAGATTTTCATTGTTACACACGCTAACATGTACAAGACCAATGATA
TGTCAGCTCCATGCGGTCATATGAGTAGTGTAACGTGGCGTGTCTCTGTT
GCTCGTCCCACTCCCCCTCATTCTTCCCTCCCTCCCTCCCATCACTCCCC
TCATATGTTCGGGTTGAAATGAAAAAAATCAAAGAGCTTTTTAGCTGCTG
CTTCTGATTCCAAGAGCATATGCAACTCCGCGATACTCATTCTACTTAAA
GCCGCGAGGCTCTCTACTTTATTCATAATCGCTCGGAAGTTGTTGACCGT
CACTCCGGGTAGCTTGAGGAGTAAGTCTTGGGCAGTGAGGTGCTTCCCGG
CGTCGCTGTCTTCTTCCCCCGTACCACCGCCGGCGGTCTGGGAAAAGGTA
GAGGGAAAGAGGGAAAGAGGGAGGGAAGCGAGTTAGGATGACGATGAGCA
AGACAGAAACACAGGCCCCGGCTTTGATGGAGGGAGAAAGAGGACAAAGT
AGTAGAGACAAGAACATACGGCTGTCCGTTGTTCTACCATATGACCAGAG
ACATACCACTGCTTTCCTGACATCTACGGGTGCATTACCCGCCTTGAGGA
CCTGTTGCGTATGAAAAGACGACGTAAGAGGAAACGAAGTGAAAAGAATC
AGTCCGGGCAAGTCCCTGCGCCGGCACCATAAATCCAAAAGAGGAAGGGA
GGGTGGAATGAAGGGAGGGTGAAATTGAGGGAATGAGGGAAAGGCTCACC
TTGAACAACAAAACCGTCTGATGTGGGTTCCGACTCCACAAAATCCGCAA
CGCCGGAAATTTCAACGTCAAGAGCACCATCTTTGAAATGATGTTGCTCT
GTTGGATGTCATCCCCTATGTCCCCGGGGGCCTGCAACGAGAAGGACTTA
TCATCCTGGAATTCGATTAAGAGGGTCGCCACCTTGTAGTGTCTTAGCAT
GTTCTCAACCTGCCCATACAATCGCCCACTTCCGAAAGACCCGAACAAAT
CAGAGACTGACTTCCGCTCAATCACTATCTCGGGGGTGAGGACAAAGTCT
CCGATGGTGAGAGTGAGGGGGAGGATGGTCATTCCTCCGTTGTGGAGGAG
GTTGGGAAGGGAGGAGCGAAATTCGCGGATATCCACGACGACTCTAAGGC
AGGAGGAGGAAGAGGAAGAAGGGAGGGAGGAGGCGTCGCGAGTGACCAGA
CGGGTGTCGGCGACAAGTTTGTCAATGTAGGAGCCGGGGGTGGGGAGGGG
GGTCTCGTATAGACTAGTTGGCATGACCATGTGCTTCTTCTCTTGAACCA
GGCGTTCAAAGGCCTCCTTCTCACGGGTCAGCGCGGAGAGGTAGCGTTGT
TCTTCCACCGATTTCTCGTACACTATAAAATACACCTTCAGTGTCTCGGA
CATGGGGCGACGGGCTTGGTGCACCTCCACTTCCCGCACAAATTGAGCGT
CAGGATCGTACAACACCACCGCGTCCGGGGAGACCTCATCCAACACATTC
ATATTGGTATACGCCTGTCCATACGTGATAATAAATACCTGCCCCCACTT
CCCTTGTCCTCCCTCCTTCCTTCCCTCACCATCCTTGCCTTCGTCACCGC
TGCTACTGCTGCTGCTGTTGCTGCTTCCACCCATGCGATCAAACAGGTCT
TGAGCCATGTTGTACTTATTCTTCTCCCCCCCCCCTTTCCTTGCCATGCA
CGCTTCCGCTTTTGCAGGACCTTGCCCTTCCCCTTCCCGATAGTGATAGT
AGCAGCAGCAGTTTCTTCTCGTCCTCCTCCCCGTCTCAGTCCCCTCCCAC
CCTTGCGGGCCTTCCCTCCTCCTCGCCCGCCTTTTGCGGTGGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCA back to topCoding sequence (CDS) from alignment at chr14:663981..667557- >NO14G02210.1 ID=NO14G02210.1|Name=NO14G02210.1|organism=Nannochloropsis oceanica|type=CDS|length=1350bp|location=Sequence derived from alignment at chr14:663981..667557- (Nannochloropsis oceanica) ATGGCACCCCCCGACCCAAACACCACCACCACTGTACAAGCCAACTCACA CAAATGTAGCAGCAGCAACAACAACAAGAACAATAAATACAACAGCAGCA AGCGCCGTCGCCTCCTGCAAGAAGCTGTGGCGGAAGCAGCCTCATCTGCC ACGTGTGGACAAGCTGAAAGCAACGAGATGGACCCCGCCTCTATAACCTT TCCCTTGGGCTTGGAAGTAGGCTTCGAGTCCGCTGACTTGCGGATCATGG AAGCACCTCCCGAGGTCGTGGCCGCTTTGACACAAAGACAGACCTTGCGG GTGGTGGGCGAGTCGCGGGATCAACCGGCAGCACTAGTGACGGAGAACGC GACCTTCGAATTGTGTCGGGTCGAGACATCCAACATGCTTCTCCTCGTCC CGCCCGTGGAGACCGGGGCAAATATAGCGACAGCCACGGGGAATGCCTCG TTTCATTATGAACTTAAACGAAGCAAGCCAAAACAGCAATTGTTGAGGCA GCTTCTTGGGAAGGGAACGGTGTGGTCGTTGGACGAGCTGGAGACGCGGG TACAGGGCAGCCGGGTTGAGGTGTTGGCGTTGCTGCGTCAGATGAATGCC TTGGAGGTGGATGGTGACGTCCAGAAATGGCGGGGTGTGAGCGAGGAGGA GGAAGTGTCTCCGACCTTGGATCGTCTGTTGGCGGAGCTAATAAGCGCGG GCAAGAGCTTGGAGGGAGTTGATGAGGAGGACTGCTTGCGGATGCTGCCT GACGTCGAACCTGTTCTGATCCATCATTGCCTCAAAGCCTATGGGAGCCC TAACAACGGCCACGTTTCACAAACCCCAGCAAAATCAGCTACCGCAGCAG CAGCAGTAGCCGTGAGCTCAACCGCACCCGAACAGCCGCAGCAGCAGCAG CAGCAGCTGTCACCACCGCAGCAGAAGCGTACGTGGACGTTGGACCTAAG CAAGGTCGCTCGTTTCAAGGCCCACCAGATTTTCCAGCAAGGGATGAGTC GTCCCCAGAGAGGGATCTGGGAGCGTGATAATTTCTTCTTAGAATGGGAG ACGAGGCTGCCAGGTTCTTATCGGCCTGAAGCTGAATTGTTGAGGGGGTT GGCGGTAGAGGAGAAGGTGGGGGGGGAGGAGTGCCTCCGGTACCTTCCGG GTGAGACAATGCCTTTGGATCCGACAGAGAGGTTAAAGAAATTGTTTGCC GTTAGAAAGAAGTGGCAGTTGGAAGAGATGATGCCCTACATGCTGCCTCT GGTGCCGGGGAAGAAAGACTTGGAAGACTTTTTGTTGAAGCACACACGGT CGGCCGTGGCAGTGGACGGGGTGGGTGGGAGAACGTACTCTGCAAAGTGA back to top
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