NO14G01600, NO14G01600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G01600 vs. NCBI_GenBank
Match: EWM24667.1 (Protein of unknown function DUF3172 [Nannochloropsis gaditana]) HSP 1 Score: 347.8 bits (891), Expect = 3.300e-92 Identity = 190/238 (79.83%), Postives = 194/238 (81.51%), Query Frame = 0 Query: 70 RLGRRLGIPLYSMLDKEGN----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIRPEVGKNRLPFGVSWIPQGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLE-NPKLGVGEDVYDK 303 R GRR I + SM DKEGN XXXXXXXXX R RPEVGKNRLPFG+SWIPQGLSAALL+GTFVLGVGTGVTVDSA+NTN KDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLE NPKLGVGEDVYDK Sbjct: 35 RSGRRAKISMQSMYDKEGNRRRRVRSRVNRKGEDADXXXXXXXXXYRAMRPPALDRVRPPPFSRGRPEVGKNRLPFGISWIPQGLSAALLLGTFVLGVGTGVTVDSAVNTNKKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLEKNPKLGVGEDVYDK 272
BLAST of NO14G01600 vs. NCBI_GenBank
Match: CBJ25604.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 245.4 bits (625), Expect = 2.300e-61 Identity = 114/160 (71.25%), Postives = 135/160 (84.38%), Query Frame = 0 Query: 143 VSWIPQGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQ-GRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVYD 302 V +P LS AL+ G FVLG+GTGVTVDSAINT+P+DLASRDAID+NAPNP CQ YG+S +V+D R+FV+FNPF ++V+QAD KPGCVLR++NVV+ LQ RGLLT+E+V CK G NTW YVGD+ND PQLSCVYQSDDAQNEFL NPK G+GEDVYD Sbjct: 115 VPLLPATLSKALIAGVFVLGIGTGVTVDSAINTDPRDLASRDAIDRNAPNPNICQTYGSSAMVVDQRVFVTFNPFSLHVSQADTKPGCVLRSSNVVEVLQRKRGLLTNEDVETCKGGMNTWGYVGDLNDHPQLSCVYQSDDAQNEFLSNPKYGLGEDVYD 274
BLAST of NO14G01600 vs. NCBI_GenBank
Match: EJK65488.1 (hypothetical protein THAOC_13645 [Thalassiosira oceanica]) HSP 1 Score: 235.3 bits (599), Expect = 2.400e-58 Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 0 Query: 146 IPQGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVYD 302 +P +SAALL G FVLG+GTGVTVDS INTNPKDLASRDA+DKNAPNP C YGAS + D R+FVSFNPF+VYV QADVKP CVLR +NVV L+ R LL D EV CK NTWA+VGD+ND+PQLSCVY+S+DAQNEFLE+PK G+GED D Sbjct: 100 MPSSVSAALLAGVFVLGIGTGVTVDSQINTNPKDLASRDAVDKNAPNPTLCTTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPSNVVPVLKERKLLNDNEVRGCKMNMNTWAFVGDLNDQPQLSCVYKSEDAQNEFLEDPKRGIGEDYLD 255
BLAST of NO14G01600 vs. NCBI_GenBank
Match: XP_002294490.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED88324.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 230.3 bits (586), Expect = 7.800e-57 Identity = 107/149 (71.81%), Postives = 123/149 (82.55%), Query Frame = 0 Query: 150 LSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGED 299 +SAALL G FVLG+GTGVTVDS INTNPKDLASRDA+DKNAPNP C YGAS + D R+FVSFNPF+VYV QADVKP CVLR AN+V L+ R LL D E+ CK NTWA+VGD+ND+PQLSCVY+S+DAQNEFLE+PK G+GED Sbjct: 3 VSAALLAGVFVLGIGTGVTVDSQINTNPKDLASRDAVDKNAPNPTLCTTYGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRPANIVPILKERKLLNDNEIRGCKMNMNTWAFVGDLNDQPQLSCVYKSEDAQNEFLEDPKRGIGED 151
BLAST of NO14G01600 vs. NCBI_GenBank
Match: GAX20229.1 (hypothetical protein FisN_12Hh078 [Fistulifera solaris]) HSP 1 Score: 227.3 bits (578), Expect = 6.600e-56 Identity = 103/156 (66.03%), Postives = 124/156 (79.49%), Query Frame = 0 Query: 146 IPQGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVYD 302 +P+ +S +LL G FVLGVG GVT+DS +NTNPKDLASRDAID+ APNP C + GAS + D R+FVSFNPF+VYV+QADVKP CVLR ANVV L+ +GL+ D+EV CK NTWA+VG++ D PQLSCVY+S DAQNEFL NPKLG+GED D Sbjct: 100 LPESVSKSLLAGVFVLGVGLGVTIDSQVNTNPKDLASRDAIDQAAPNPTLCAKLGASAMAFDQRVFVSFNPFNVYVSQADVKPACVLREANVVPVLRAKGLINDQEVRACKQNMNTWAFVGNLEDTPQLSCVYKSQDAQNEFLSNPKLGIGEDYLD 255
BLAST of NO14G01600 vs. NCBI_GenBank
Match: GAX15217.1 (hypothetical protein FisN_12Lh078 [Fistulifera solaris]) HSP 1 Score: 227.3 bits (578), Expect = 6.600e-56 Identity = 103/156 (66.03%), Postives = 124/156 (79.49%), Query Frame = 0 Query: 146 IPQGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVYD 302 +P+ +S +LL G FVLGVG GVT+DS +NTNPKDLASRDAID+ APNP C + GAS + D R+FVSFNPF+VYV+QADVKP CVLR ANVV L+ +GL+ D+EV CK NTWA+VG++ D PQLSCVY+S DAQNEFL NPKLG+GED D Sbjct: 88 LPESVSKSLLAGVFVLGVGLGVTIDSQVNTNPKDLASRDAIDQAAPNPTLCAKLGASAMAFDQRVFVSFNPFNVYVSQADVKPACVLREANVVPVLRAKGLINDQEVRACKQNMNTWAFVGNLEDTPQLSCVYKSQDAQNEFLSNPKLGIGEDYLD 243
BLAST of NO14G01600 vs. NCBI_GenBank
Match: OEU15378.1 (hypothetical protein FRACYDRAFT_269337 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 220.3 bits (560), Expect = 8.000e-54 Identity = 102/156 (65.38%), Postives = 125/156 (80.13%), Query Frame = 0 Query: 146 IPQGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVYD 302 +P +S +LL G FVLG+G GVTVDSAINTNP+DL+SRDAID+ APN K C GAS + D R+FVSFNPF+VYV QADVKP CVLR++NVV L+ R L+ D+EV CK+ NTWA+VGD+++KPQLSCVY+S+DAQNEFLENP G+GED D Sbjct: 127 LPDAVSKSLLAGIFVLGIGLGVTVDSAINTNPRDLSSRDAIDQAAPNSKLCADMGASAMAFDQRVFVSFNPFNVYVAQADVKPACVLRSSNVVPILKDRKLINDKEVFACKSNMNTWAFVGDLDNKPQLSCVYKSEDAQNEFLENPTYGIGEDYLD 282
BLAST of NO14G01600 vs. NCBI_GenBank
Match: XP_002181184.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47107.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 202.6 bits (514), Expect = 1.700e-48 Identity = 95/139 (68.35%), Postives = 109/139 (78.42%), Query Frame = 0 Query: 150 LSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFL 289 +S ALL G FVLGVG GVT+DS +NTNPKDLASRDAID APNP C + GAS + D R+FVSFNPF+VYV+QADVKP CVLR ANVV L+ RGL+ D EV CK NTWA+VG ++D PQLSCVY+S DAQNEFL Sbjct: 2 VSKALLAGVFVLGVGLGVTIDSQVNTNPKDLASRDAIDNAAPNPTLCAKLGASAMAFDQRVFVSFNPFNVYVSQADVKPACVLREANVVPILKARGLINDNEVRSCKQNMNTWAFVGSLDDTPQLSCVYRSQDAQNEFL 140
BLAST of NO14G01600 vs. NCBI_GenBank
Match: XP_024358224.1 (uncharacterized protein LOC112273544 isoform X1 [Physcomitrella patens] >PNR32872.1 hypothetical protein PHYPA_024815 [Physcomitrella patens]) HSP 1 Score: 167.5 bits (423), Expect = 6.200e-38 Identity = 75/153 (49.02%), Postives = 106/153 (69.28%), Query Frame = 0 Query: 148 QGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVY 301 +G + +L G FVLG+G G+TVD+ +N P ++ASR+ ID+ PNP C G S +VLD R+F+SFNPF+VYV+Q +VKPGCVLR +N L+ RGL+T +EV CK NT+ +VGD+ P++SCVY S+ A+N+FL++P D Y Sbjct: 170 RGANRYILAGMFVLGMGAGITVDTVLNVEPNNVASREVIDRQTPNPDVCIANGMSAMVLDQRLFISFNPFNVYVSQTEVKPGCVLRQSN-WSVLEARGLVTSDEVRACKRNMNTFGFVGDLRQAPEISCVYHSESAENQFLKDPSKATLGDGY 321
BLAST of NO14G01600 vs. NCBI_GenBank
Match: XP_024382903.1 (uncharacterized protein LOC112285851 [Physcomitrella patens] >XP_024382904.1 uncharacterized protein LOC112285851 [Physcomitrella patens] >PNR49899.1 hypothetical protein PHYPA_011796 [Physcomitrella patens]) HSP 1 Score: 167.2 bits (422), Expect = 8.100e-38 Identity = 74/153 (48.37%), Postives = 106/153 (69.28%), Query Frame = 0 Query: 148 QGLSAALLMGTFVLGVGTGVTVDSAINTNPKDLASRDAIDKNAPNPKFCQRYGASTLVLDNRIFVSFNPFDVYVTQADVKPGCVLRAANVVQALQGRGLLTDEEVNVCKNGNNTWAYVGDINDKPQLSCVYQSDDAQNEFLENPKLGVGEDVY 301 +G + +L G F+LG+G G+TVD+ +N P ++ASR+ ID+ PNP C G S +VLD R+F+SFNPF+VYV+Q +VKPGCVLR +N L+ RGL+T +EV CK NT+ +VGD+ P++SCVY S+ A+N+FL++P D Y Sbjct: 168 RGANRFILAGMFILGIGAGITVDTVLNVEPNNVASREVIDRQTPNPDVCIANGMSAMVLDQRLFISFNPFNVYVSQTEVKPGCVLRQSN-WSVLEQRGLVTSDEVRACKRNMNTFGFVGDLRQAPEISCVYHSESAENQFLKDPSKATLGDGY 319 The following BLAST results are available for this feature:
BLAST of NO14G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G01600 ID=NO14G01600|Name=NO14G01600|organism=Nannochloropsis oceanica|type=gene|length=3366bpback to top protein sequence of NO14G01600.1 >NO14G01600.1-protein ID=NO14G01600.1-protein|Name=NO14G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=303bpback to top protein sequence of NO14G01600.2 >NO14G01600.2-protein ID=NO14G01600.2-protein|Name=NO14G01600.2|organism=Nannochloropsis oceanica|type=polypeptide|length=339bpback to top protein sequence of NO14G01600.3 >NO14G01600.3-protein ID=NO14G01600.3-protein|Name=NO14G01600.3|organism=Nannochloropsis oceanica|type=polypeptide|length=291bpback to top Synonyms
Publications
|