NO14G01030, NO14G01030 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G01030
Unique Name	NO14G01030
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4388
Alignment location	chr14:340039..344426 -

Link to JBrowse

Properties


Property Name	Value
Description	Dna mismatch repair protein mlh1 isoform 1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:340039..344426 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016887	ATPase activity
GO:0005524	ATP binding
GO:0030983	mismatched DNA binding
GO:0030983	mismatched DNA binding
GO:0016887	ATPase activity
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0032300	mismatch repair complex
GO:0032300	mismatch repair complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006298	mismatch repair
GO:0006298	mismatch repair

Vocabulary: **INTERPRO**
Term	Definition
IPR020568	Ribosomal_S5_D2-typ_fold
IPR036890	HATPase_C_sf
IPR011186	DNA_mismatch_repair_MLH1/HexB
IPR038973	MutL/Mlh/Pms
IPR032189	Mlh1_C
IPR013507	DNA_mismatch_repair_C

Homology

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BLAST of NO14G01030 vs. NCBI_GenBank
Match: EWM24700.1 (dna mismatch repair protein mlh1 isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 691.0 bits (1782), Expect = 5.000e-195
Identity = 392/671 (58.42%), Postives = 433/671 (64.53%), Query Frame = 0

Query:    1 MSDGDGHITQASSGSSSCAMSSWKAKEKVDDVPRIQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGA----APGNVEREEGEGGRE--------------EGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQ 654
            M  GDG  +  S+G++ C+           ++P I+RL+ DVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRV DFPLLCERFTTSKLR+F+DL+SIASFGFRGEALAS+THVA V++TSKT DSPCAYKARF DGK++P                      P PCAGTNGTTIT EDLFYNM TRRQALKNPNDLYRA+LDVVTRYAVHFGKDG+SFTC+KQGQARPDLYTPQRGASVL  IK+AFGQVLGRELL L++S   S   REGG+EG +    +P   E    E GRE              +G++ LSFKA GYVSNANF++KKGVFMLFINNRMVESTAIKR + S+YAPILP HTHPF+YLAL++PP+HVDVNVHPTKREV FLHED LLSKLAAG+EALL GANTSRTFYGKSLAHGLAPPTDLTQVIGAP PP+                                           LLPYKMIRTDASM +LRSFLYTPE                                                                                                  +D HYRRRLPSF ETKCQYLSVRALLADIHDRVHQ
Sbjct:    1 MRGGDGTSSGKSTGNTLCSAQKDTLDTDSVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVP-------------GVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVS---SEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPT---------LEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPE------------ADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTATVGEREGGREGGKDRHYRRRLPSFTETKCQYLSVRALLADIHDRVHQ 634

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BLAST of NO14G01030 vs. NCBI_GenBank
Match: XP_005854679.1 (DNA mismatch repair protein MLH1, partial [Nannochloropsis gaditana CCMP526] >EKU21680.1 DNA mismatch repair protein MLH1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 552.0 bits (1421), Expect = 3.600e-153
Identity = 294/443 (66.37%), Postives = 326/443 (73.59%), Query Frame = 0

Query:   96 RVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGA----APGNVEREEGEGGRE--------------EGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPE 521
            +V DFPLLCERFTTSKLR+F+DL+SIASFGFRGEALAS+THVA V++TSKTRDSPCAYKARF DGK++P                      P PCAGTNGTTIT EDLFYNM TRRQALKNPNDLYRA+LDVVTRYAVHFGKDG+SFTC+KQGQARPDLYTPQRGASVL  IK+AFGQVLGRELL L++S   S   REGG+EG +    +P   E    E GRE              +G++ LSFKA GYVSNANF++KKGVFMLFINNRMVESTAIKR + S+YAPILP HTHPF+YLAL++PP+HVDVNVHPTKREV FLHED LLSKLAAG+EALL GANTSRTFYGKSLAHGLAPPTDLTQVIGAP PP+                                           LLPYKMIRTDASM +LRSFLYTPE
Sbjct:    7 QVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTRDSPCAYKARFQDGKLVP-------------GVGVGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVS---SEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPT---------LEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPE 424

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BLAST of NO14G01030 vs. NCBI_GenBank
Match: CBN80029.1 (MutL protein homolog 1 [Ectocarpus siliculosus])

HSP 1 Score: 493.8 bits (1270), Expect = 1.200e-135
Identity = 533/1149 (46.39%), Postives = 639/1149 (55.61%), Query Frame = 0

Query:   34 RIQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGL--APPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLP----------------------------------YKMIRTDASMGSLRSF--------LYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRD------------------------------------------------------------------------MHYRRRLP-----------------------------------------------------------------------------------SFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISF----------DPCADEGRG-------------------------ALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            +I +L+ DVVNRIAAGEVV +PANAVKEL+ENSLDAG+ SI VT K GG++LLQIQD+GHGIR  D P++CERFTTSKLR F DL+++++FGFRGEALAS+TH A VT+TSKT  S  AYKA++SDG+++                       P PCAG  GTTI  EDLFYNM TRR+A K+P + Y+ ILDVVTRYAVHFG  GVSFTCKK GQ  PDL+TP R +S L NI++AFG  L REL+ L+    CS AE                ++G  G E    K +FKA G VS A++  K+  F+LFIN+R+VES +IK+T+ S Y  +LP +THPF+YL + MP  H+DVNVHPTKREV FLH++ LL  L   +E  L+GAN SRTFY + +   +    P              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P                                   K++RTD + G+L +F        L++P         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     D                                                                            + +P                                                                                   +FVET  +Y SVR+L+AD   + H+G+T +L+K+ FVG VD   SLLQ +TKL+LV H  L KE F+Q+ +RRFG MPRL LA  P+P+   +R A DLPE  W    G KD+LA+ A  +L  KA +LDEY+ IS           D  + EG+G                          ++SLP LL   TP   GLPVFLLRLA EV+W +E+ CFEGVATEL L+YS L    E       XXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXX  E    P +   ++Q+VLYPAFR   LPP+  AA     ++Q+A LE+LYKVFERC
Sbjct:   10 KILKLDEDVVNRIAAGEVVQRPANAVKELMENSLDAGSTSITVTAKQGGLKLLQIQDNGHGIRREDLPIVCERFTTSKLREFGDLRTMSTFGFRGEALASITHTAKVTITSKTPSSQVAYKAKYSDGRLV--------------AGGPGQSADPKPCAGVTGTTILAEDLFYNMDTRRRAFKSPGEQYKGILDVVTRYAVHFGDRGVSFTCKKHGQPSPDLHTPPR-SSCLANIRVAFGPALSRELVELE----CSQAEE-------------LLDQGADGGEVAPSKFAFKAKGLVSGADYSAKRSDFILFINDRLVESPSIKKTVESAYKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKREVHFLHQEELLECLRQAVEQKLAGANQSRTFYSQVILPDMDFGTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRNVGLEAMVEGDEXXXXXXXXXXXXXXXXXXXAARKLVRTDRTAGNLDAFLRPSQQPALFSPFQPSQSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGQPDNVGQXXXXXXXXXXXXPASEATSGDRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMPFAGISKLGRPHQNCNCCGGRAPRGPDGSIVLTQEAGATGGSSSTPGDGIDGVPQRGTXXXXXXXXXXXXXXXXXXXXXXXXPDTFVETSVKYNSVRSLIADFKTQAHKGLTQMLRKYSFVGMVDLHLSLLQFNTKLVLVNHTALSKEAFFQMTLRRFGAMPRLPLAI-PLPVLPLIRAAFDLPEAAWTAMDGDKDDLAQDAVKLLEEKAALLDEYFMISLSRRSVAATANDDDSVEGKGGEERGANGTAGSDAAQEDGEEAQALCISSLPLLLEGHTPVGEGLPVFLLRLAIEVDWSEERTCFEGVATELALFYSTLPQGGEDTAVPPAXXXXXXXXXXXXXXXXXXXXXXXXWVRGQEWGTGRPGKARRRXXXXXXXXXXRAEFALAPAEATAVVQNVLYPAFRWALLPPQAFAAD--GTVLQLACLERLYKVFERC 1123

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BLAST of NO14G01030 vs. NCBI_GenBank
Match: XP_006161131.1 (PREDICTED: DNA mismatch repair protein Mlh1 [Tupaia chinensis])

HSP 1 Score: 484.6 bits (1246), Expect = 7.100e-133
Identity = 313/912 (34.32%), Postives = 444/912 (48.68%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPT-DLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I+RL+  VVNRIAAGEV+ +PANA+KE++EN LDA + SI V VK+GG++L+QIQD+G GIR  D  ++CERFTTSKL+ F+DL +I+++GFRGEALAS++HVAHVT+T+KT D  CAY+A +SDGK+                        P PCAG  GT ITVEDLFYN+ TRR+ALKNP++ Y  IL+VV RYA+H    G+SF+ KKQG+   D+ T    A+ ++NI+  FG  + REL+                               E G E+  + L+FK  GY+SNAN+ +KK +F+LFIN+R+VEST++++ + ++YA  LP +THPF+YL+LE+ P +VDVNVHPTK EV FLHE+ +L ++   IE+ L G+N+SR ++ ++L  GLA P+ ++ +    P P S                                           +  ++M+RTD+    L +FL  P                                                                                                        RRR+ +         SV  L  +I++R H+ +  +L  H FVG V+  ++L QH TKL L+   +L +ELFYQ+ I  F     L L S P PL     +ALD PE  W EE G K+ LAE     L  KA ML +Y+ +  D       G LT LP L+  + P   GLP+F+LRLATEVNW++E+ CFE ++ E  ++YS    +                                                              G  P  +++ ++H++Y AFRS  LPP++     +  I+Q+A L  LYKVFERC
Sbjct:    8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDMDIVCERFTTSKLQTFEDLANISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKL---------------------KAPPKPCAGNQGTQITVEDLFYNITTRRKALKNPSEEYGKILEVVGRYAIH--NSGISFSVKKQGETVADVRT-LPSATTVDNIRSIFGNAVSRELI-------------------------------EVGCED--KTLAFKMSGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESQLLGSNSSRLYFTQTLLPGLAGPSGEVIKSSAGPTPSS------------------------------------ASGSGDKVYAHQMVRTDSREQKLDAFLQPPSKPPSRQPQTSVPEGRSETMARQQDEEMLELPAPKCLNSQMAARSQDLEEDTATATPETAEERGPASSPANPRKRHREESDVEMVEDDSQKELTAACTP-----RRRIINLT-------SVLTLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRL-SEPAPLFDLAMLALDSPESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDE-----EGNLTGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSVRKQYISEESTLSAQQNEV-----------------------------------------------PGSAPNSWKWAVEHIVYKAFRSHLLPPKQFTEDGS--ILQLANLPDLYKVFERC 759

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BLAST of NO14G01030 vs. NCBI_GenBank
Match: XP_016085623.1 (PREDICTED: DNA mismatch repair protein Mlh1 [Sinocyclocheilus grahami])

HSP 1 Score: 480.7 bits (1236), Expect = 1.000e-131
Identity = 334/911 (36.66%), Postives = 469/911 (51.48%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I++LE  VVNRIAAGE++ +PANA+KE++EN LDA A +I +TVK+GG++L+ IQD+G GIR  D  ++CERFTTSKL++F+DL SIA++GFRGEALASV+HVAHVT+T+KT D+ CAY+A + DGK+                        P PCAG  GT I+VEDLFYN+ TRR+ALK+P++ Y  I++VV+RY++H    G SF+ KKQG+   D+ T Q  ASVL+NI+  FG  + REL+                         VE E+         QKL+FK  GY+SNAN+ +KK + +LFIN+R+VES+A+K+ + ++Y   LP +THPF+YL+LE+ P ++DVNVHPTK EV FLHED ++  +   IE+ L G+N+SRT++ ++L  GL+  T  ++   +                                                +  ++M+RTD+ +  L +FL                                  XXXXXXXXXXXXXXXXXXXXXXXXXX                                               RRR         +  S++ L  DI    H+G+  +L+ H FVG+V+  ++L+QH TKL L+   +L +ELFYQ+ I  FG    L L SNP PL+    +ALD  E  W EE G K+ LA+     L  KA ML+EY+ +  D       G LT LP LL  +TP+  GLP+F+LRLATEVNW++E+ CF     E   +YS                                                                 E       +++ ++H L+ A R++F PP+  +   +  ++QIA+L +LYKVFERC
Sbjct:    5 IRKLEETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQDNGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASVSHVAHVTITTKTADAKCAYRASYCDGKL---------------------KAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRYSIH--NSGKSFSVKKQGEMVADVKTLQ-NASVLDNIRAVFGVAVSRELI------------------------EVECED---------QKLAFKMKGYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSASTSASKASSSSADSQ-----------------------------------------ERVYAHQMVRTDSKVQKLDAFLQPSTSSSAAQSRSDKAYSSSTAAQGSNHLELLTAXXXXXXXXXXXXXXXXXXXXXXXXXXKRPHVEEVKEDLTAASLP-----------------------------RRRF-------IKLTSIKELREDIEQHTHKGLQDLLQDHSFVGSVNPQWTLVQHQTKLYLLNTTKLSQELFYQILIYDFGNFGVLRL-SNPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKQKAVMLEEYFSLEIDE-----EGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDREKECFHDFGIECSHFYS-----------------------------------------------------IRKQYTLEPDAEEPQDAEMSWQWKVEHALFKALRTLFSPPKHFSEDGS--VLQIASLPELYKVFERC 720

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BLAST of NO14G01030 vs. NCBI_GenBank
Match: NP_001165838.1 (DNA mismatch repair protein Mlh1 [Sus scrofa] >ADC38896.1 mutL-like protein 1 [Sus scrofa])

HSP 1 Score: 480.3 bits (1235), Expect = 1.300e-131
Identity = 312/911 (34.25%), Postives = 436/911 (47.86%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I+RL+  VVNRIAAGEV+ +PANA+KE++EN LDA + SI V VK+GG++L+QIQD+G GIR  D  ++CERFTTSKL++F+DL  I+++GFRGEALAS++HVAHV +T+KT D  CAY+A +SDGK+                        P PCAG  GT ITVEDLFYN+ TRR+ALKNP++ Y  IL+VV RY++H    G+SF+ KKQG+   D+ T    A+ ++NI+  FG  + REL+                         VE E+         + L+FK  GY+SNAN+ +KK +F+LFIN+R+VEST++++ + ++YA  LP +THPF+YL+LE+ P +VDVNVHPTK EV FLHED +L ++   IE+ L G+N SRT++ ++L  GL  P+       A + PS                                           +  Y+M+RTD     L +FL                                                                                                           RRR+ +         SV  L  +I++R H+ +  +L  H FVG V+  ++L QH TKL L+   +L +ELFYQ+ I  F     L L S P PL     +ALD PE  W EE G K+ LAE     L  KA ML +Y+ +  D       G L  LP L+  + P   GLP+F+LRLATEVNW++E+ CFE ++ E  ++YS    +                                                              G  P  +++ ++HV+Y AFRS  LPP+     +   I+Q+A L  LYKVFERC
Sbjct:    8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVAITTKTADGKCAYRAHYSDGKL---------------------KAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIH--NSGISFSVKKQGETVADVRT-LPNATTVDNIRSIFGNAVSRELI------------------------EVECED---------KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIESRLLGSNASRTYFTQTLLPGLTGPSGEAVKSAADVTPS------------------------------------STGSGDKVYAYQMVRTDCREQKLDAFLQPASKSLSSQPQAIVPEDRTDAFGSEARQQDEEMLELPAPSEVAAKHQSLEEDTAERTSDLSEKRGPPSSPGNPRKRHRESSDVEMVEDANRKEMTAACIP------RRRIINLT-------SVLTLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRL-SEPAPLFDLAMLALDSPESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDE-----EGNLVGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSE-----------------------------------------------APGSTPNPWKWTVEHVVYKAFRSYLLPPK--CFTEDGNILQLANLPDLYKVFERC 757

[Close]

BLAST of NO14G01030 vs. NCBI_GenBank
Match: XP_018590115.1 (PREDICTED: DNA mismatch repair protein Mlh1 isoform X1 [Scleropages formosus])

HSP 1 Score: 480.3 bits (1235), Expect = 1.300e-131
Identity = 314/911 (34.47%), Postives = 436/911 (47.86%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I+RL+  VVNRIAAGEV+ +PANAVKE++EN LDAG+ SI VTVKDGG++L+QIQD+G GIR  D  ++CERFTTSKLR F+DL  I ++GFRGEALAS++HVAHVT+T+KT D  CAY+A +SDGK+                        P PCAG  GT ITVEDLFYN+ TRR+AL++P++ Y  I++VV+RYA+H    G SF  KKQG    DL T    AS+++NI+  FG  + REL+                               E G E+  QKL+FK  G++SNAN+ +KK +F+LFIN+R+V+S+A+K+ + ++Y+  LP +THPF+YL+LE+ P +VDVNVHPTK EV FLHED ++  +   +E  L G+N+SRT++ ++L  GL  P       G  + PS                                                M+RTD     L +FL                                                                                                           RR +        +  SV+ L  +I DR H G+  +L+ H FVG V   ++L+QH TKL L+    L +ELFYQ+ I  FG    L L+ +P PL+    +AL++ E  W E+ G K+ LA+     L  KA ML++Y+ +  D       G LT LP LL  +TP+  GLP+F+LRLATEVNW++E+ CF   + E  ++YS                                                                G TGP    + + ++H+L+ AFR++  PP    + Q   ++QIA L  LYKVFERC
Sbjct:    5 IRRLDEAVVNRIAAGEVIQRPANAVKEMLENCLDAGSSSIQVTVKDGGLKLIQIQDNGCGIRKEDMEIVCERFTTSKLRAFEDLSVITTYGFRGEALASISHVAHVTITTKTADGKCAYRAAYSDGKL---------------------KASPKPCAGNQGTQITVEDLFYNVSTRRKALRSPSEEYSKIVEVVSRYAIH--NSGKSFAVKKQGDTTADLRT-LLNASMVDNIRAVFGNAVSRELI-------------------------------EVGCED--QKLAFKLRGFISNANYSVKKCIFLLFINHRLVDSSALKKAIETVYSAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDAIIESVQKHVEGKLLGSNSSRTYFTQTLLPGLPAP-------GGDVRPSSSCLSDPSERPS---------------------------------AQHMVRTDCRAQKLDAFLQPGVGVSAPDAPDQQGRPREDSRGLDDARMLTVLEEEEEPKISEGVQKGSPVLPEVSSRKRPRVEPPQESPPPATPS------------------------------RRNI--------RLTSVKELRVEISDRAHAGLQEMLQNHTFVGCVTPQWALVQHQTKLYLLDVTRLSQELFYQIVIYDFGNFGLLRLSQSPAPLYDLAMLALEMEESGWSEDDGPKEGLAQYIVDFLQKKAEMLEDYFSMEIDQ-----EGNLTGLPLLLDGYTPAMEGLPMFVLRLATEVNWDEEKECFRDFSRECSMFYS----------------------------------------------MRKQYMPEDTLEAEPKEQGTTGP---SWRWTVEHLLFKAFRTLLSPPG--TSTQDGSVLQIANLPDLYKVFERC 724

[Close]

BLAST of NO14G01030 vs. NCBI_GenBank
Match: NP_956953.1 (DNA mismatch repair protein Mlh1 [Danio rerio] >AAH57507.1 MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Danio rerio])

HSP 1 Score: 479.6 bits (1233), Expect = 2.300e-131
Identity = 326/911 (35.78%), Postives = 461/911 (50.60%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I+RL+  VVNRIAAGE++ +PANA+KE++EN LDA + +I +TVK+GG++L+ IQD+G GIR  D  ++CERFTTSKL++FDDL SIA++GFRGEALAS++HVAHVT+T+KT D+ CAY+A + DGK+                        P PCAG  GT I+VEDLFYN+ TRR+ALK+P++ Y  I++VV+RYA+H    G SF+ KKQG+   D+ T    ASVL+NI++ FG  + REL+                         VE E+         QK +FK  GY+SNAN+ +KK + +LFIN+R+VES+A+K+ + ++Y   LP +THPF+YL+LE+ P ++DVNVHPTK EV FLHED ++  +   IE  L G+N+SRT++ ++L  GL+    + +   +   P                                            +  ++M+RTD+    L +FL    XXXXXXXXXXXXXXXXXXX                                                                                    RRR+        +  S++ L   I  + H+G+  +L+ H FVG+V   ++L+QH TKL L+   +L +ELFYQ+ I  FG    L L SNP PL+    +ALD  E  W EE G K+ LA+     L  KA ML+EY+ +  D       G LT LP LL  +TP+  GLP+F+LRLATEVNW++E+ CF   + E   +YS    +                                                            E       +++ ++HVL+ A RS+F P + L+   +  ++QIA+L  LYKVFERC
Sbjct:    5 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTGIRKDDMEIVCERFTTSKLKSFDDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYRANYCDGKL---------------------KSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRYAIH--NSGKSFSVKKQGEMVADVKT-LPNASVLDNIRVVFGVAVSRELI------------------------EVECED---------QKFAFKVKGYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSIIESIQKHIENKLLGSNSSRTYFTQTLLPGLSASASVAKASSSSADPQ-----------------------------------------ERVYAHQMVRTDSKAQKLDAFLQPSAXXXXXXXXXXXXXXXXXXXAVQDSVELDDAELLTAADVEPCGGEDPQTDAQPPGDEAPPRKRPHVEEVKEDLTAASLP-------------------------RRRI-------VKLTSIKGLRDQIELQTHKGLQELLQNHSFVGSVSPQWTLVQHQTKLYLLNTTKLSQELFYQILIYDFGNFGVLRL-SNPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKQKAEMLEEYFSLEID-----AEGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDKEKECFREFSVECSHFYSIRKSY-----------------------------------------------------TLEADADEPQDAEMSWQWKVEHVLFKALRSLFSPAKHLSEDGS--VLQIASLPDLYKVFERC 724

[Close]

BLAST of NO14G01030 vs. NCBI_GenBank
Match: XP_016330161.1 (PREDICTED: DNA mismatch repair protein Mlh1 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 479.6 bits (1233), Expect = 2.300e-131
Identity = 328/911 (36.00%), Postives = 460/911 (50.49%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I++L+  VVNRIAAGE++ +PANA+KE++EN LDA A +I +TVK+GG++L+ IQD+G GIR  D  ++CERFTTSKL++F+DL SIA++GFRGEALASV+HVAHVT+T+KT D+ CAY+A + DGK+                        P PCAG  GT I+VEDLFYN+ TRR+ALK+P++ Y  I++VV+RYA+H    G SF+ KKQG+   D+ T Q  ASVL+NI+  FG  + REL+                         VE E+         QKL+FK  GY+SNAN+ +KK + +LFIN+R+VES+A+K+ + ++Y   LP +THPF+YL+LE+ P ++DVNVHPTK EV FLHED ++  +   IE+ L G+N+SRT++ ++L  GL+                                                           +  ++M+RTD+ +  L +FL            XXXXXXXXXXX                               XXXXXXXX                                             RRR         +  S++ L  DI    H+G+  +L+ H FVG+V+  ++L+QH TKL L+   +L +ELFYQ+ I  FG    L L SNP PL+    +ALD  E  W EE G K+ LA+     L  KA ML+EY+ +  D     G G LT LP LL  +TP+  GLP+F+LRLATEVNW++E+ CF     E   +YS                                                                 E       +++ ++HVL+ A R++F PP+  +   +  ++QIA+L +LYKVFERC
Sbjct:    5 IRKLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQDNGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASVSHVAHVTITTKTADAKCAYRASYCDGKL---------------------KAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRYAIH--NSGKSFSVKKQGEMVADVKTLQ-NASVLDNIRAVFGVAVSRELI------------------------EVECED---------QKLAFKMKGYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSASXXXXXXXXXXXXXQ-----------------------------------------ERVYAHQMVRTDSKVQKLDAFLQPSTSSSAAQSRXXXXXXXXXXXQGSAEPDHLELLTALDVLEPCEAEDPQTDSQXXXXXXXXRKRPHVEEVEDLTAASLP---------------------------RRRF-------IKLTSIKELREDIEQHTHKGLQDLLQNHSFVGSVNPQWTLVQHQTKLYLLNTTKLSQELFYQILIYDFGNFGVLRL-SNPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKQKAVMLEEYFSLEID-----GEGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDREKECFHDFGIECSHFYS-----------------------------------------------------IRKQYTLEPDAEEPQDAEMSWQWKVEHVLFKALRTLFSPPKHFSEDGS--VLQIASLPELYKVFERC 722

[Close]

BLAST of NO14G01030 vs. NCBI_GenBank
Match: XP_015235514.1 (PREDICTED: DNA mismatch repair protein Mlh1 [Cyprinodon variegatus])

HSP 1 Score: 478.8 bits (1231), Expect = 3.900e-131
Identity = 333/911 (36.55%), Postives = 455/911 (49.95%), Query Frame = 0

Query:   35 IQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAXXXXXXXXXXXXXXXXXXXPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGAAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPYKMIRTDASMGSLRSFLYTPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIRRFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVLLAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRLATEVNWEQEQVCFEGVATELGLYYSDLSCHFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETGPVPKKYEYMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC 946
            I+RL+  VVNRIAAGEV+ +PANAVKE++EN LDA A SI VTVKDGG++LLQIQD+G GIR  D  ++CERFTTSKL+ F+DL +IA++GFRGEALAS++HVAHVT+T+KT D+ CAY+A +SDGK+                        P PCAG  GT I VEDLFYN+ TRR+ALK+P D Y  I++VV+RYA+H    G SF+ KKQG+   D+ T    ASV++NI+  FG  + REL+ +    P                                 KL+F   GY+SNAN+ +KK + +LFIN+R+VES+A+K+ + ++YA  LP +THPF+YL+LE+ P ++DVNVHPTK EV FLHED ++  +   +E+ L G+N+SRT++ ++L  GL+          +    S                                           +  ++M+RTD     L +FL   E                                                   XXXXXXXXXXXXXXXXXXXXXXX                                         +  SVR L A++ +  H+G+  +L+KH FVG V+  ++L+QH TKL L+   +L +ELFYQ+ I  FG    L L S P PL+    +ALD  E  W EE G K+ LA+     L  KA ML++Y+ +  D       G LT LP LL ++TP   GLP+F+LRLATEVNW+ E+ CF   + E   +YS                                                                 E       + + ++HVL+ AFR++F PP+  +   +  ++QIA L  LYKVFERC
Sbjct:    5 IRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKASSIQVTVKDGGLKLLQIQDNGTGIRREDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAKCAYRASYSDGKL---------------------KGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPGDEYSRIVEVVSRYAIH--NSGKSFSVKKQGETVADVRT-LPNASVVDNIRSVFGNAVSRELIEVGCEDP---------------------------------KLAFTLKGYISNANYSVKKCILVLFINHRLVESSALKKAVETVYAAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSVIESVQKHVESKLLGSNSSRTYFTQTLLPGLSVSGGTEMKASSSAAES----------------------------------------AERVYAHQMVRTDCRAQKLDAFLQPKERPAPDPDKPGPSGGAAQPDSLEMDDADDAEMLEAVQEAQVEESREEGSVTAXXXXXXXXXXXXXXXXXXXXXXXV---------------------------------------IKLTSVRELRAEVTENTHKGLQEMLQKHSFVGCVNPQWALIQHHTKLYLLNATKLSQELFYQILIYDFGNFGVLRL-STPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKKKAEMLEDYFSMEIDQ-----EGNLTGLPLLLDKYTPIMEGLPMFILRLATEVNWDNEKECFRDFSKECSAFYS----------------------------------------------------IRKQYVLEAEPGEEAEAEGSSWSWKVEHVLFKAFRTLFSPPKTFSEDGS--VLQIANLPDLYKVFERC 719

The following BLAST results are available for this feature:

BLAST of NO14G01030 vs. NCBI_GenBank

BLAST of NO14G01030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24700.1	5.000e-195	58.42	dna mismatch repair protein mlh1 isoform 1 [Nannoc...	[more]
XP_005854679.1	3.600e-153	66.37	DNA mismatch repair protein MLH1, partial [Nannoch...	[more]
CBN80029.1	1.200e-135	46.39	MutL protein homolog 1 [Ectocarpus siliculosus]	[more]
XP_006161131.1	7.100e-133	34.32	PREDICTED: DNA mismatch repair protein Mlh1 [Tupai...	[more]
XP_016085623.1	1.000e-131	36.66	PREDICTED: DNA mismatch repair protein Mlh1 [Sinoc...	[more]
NP_001165838.1	1.300e-131	34.25	DNA mismatch repair protein Mlh1 [Sus scrofa] >ADC...	[more]
XP_018590115.1	1.300e-131	34.47	PREDICTED: DNA mismatch repair protein Mlh1 isofor...	[more]
NP_956953.1	2.300e-131	35.78	DNA mismatch repair protein Mlh1 [Danio rerio] >AA...	[more]
XP_016330161.1	2.300e-131	36.00	PREDICTED: DNA mismatch repair protein Mlh1 [Sinoc...	[more]
XP_015235514.1	3.900e-131	36.55	PREDICTED: DNA mismatch repair protein Mlh1 [Cypri...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL138	nonsL138	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR069	ncniR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR024	ngnoR024	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR023	ngnoR023	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002297	NSK002297	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO14G01030.1	NO14G01030.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|555463	gene_5668	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
MLH1	gene5776	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO14G01030.1	NO14G01030.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO14G01030 ID=NO14G01030|Name=NO14G01030|organism=Nannochloropsis oceanica|type=gene|length=4388bp
ATGAGTGATGGCGACGGCCATATCACGCAAGCTAGCAGCGGCAGTAGTAG
CTGTGCCATGAGCAGCTGGAAAGCAAAAGAGAAGGTGGACGACGTCCCCC
GGATTCAGCGTCTGGAGGTCGATGTGGTGAATCGCATCGCGGCAGGCGAG
GTGGTGGCCAAGCCAGCTAATGCAGTCAAGgtaggaaagaatggtctaag
agggcgaaatcatggcatgatgaggaataggaggaggagaaggaagaata
aggaaaggaaagagtcaggggagtgacaacaacgagcacttcatcgctct
cctcacctccgctctctccgtttcacagGAGCTTGTTGAAAATAGTTTGG
ACGCAGGTGCCAAATCGATAGTGGTAACAGTGAAGGATGGAGGCATGCGC
CTCTTACAGATCCAAGACGACGGGCACGGCATTCGGgtgcgtacacgccc
tccttccctccctccctccctccctcccttcctccctcccctcattccct
tcgttaccagcttccatccctccctccctccctccctccatccctccatc
ccttccttcatcctgtctttcagGTGGGCGATTTCCCCCTCCTCTGCGAA
CGCTTCACTACTAGCAAGCTCCGAAACTTCGACGACTTGAAAAGCATTGC
CTCCTTCGGGTTTAGAGGAGAGGCTCTTGCCAGCGTCACCCACGTGGCTC
ATGTAACGGTCACGAGTAAAACGAGGGATAGCCCATGTGCCTACAAAGCC
CGGTTCTCGGACGGGAAGATCATTCCGTTTGATGCTGCGGCTGCTGCTGC
AGGGGGAGGAAGAGGAGGAGGAGGGGGGGGAGGGAGTGGAAATCCCTTGC
CCTGCGCAGGGACGAATGGGACGACCATCACGgtaagaagggagggaggg
aggtgaagagggaataagggaaggagggaaggagagagggggattatcta
agtataaatgattggctcacccctccccatccctccccctcacccagGTG
GAAGACTTGTTCTACAACATGCATACGCGTCGACAAGCCCTCAAAAACCC
TAATGACCTCTACCGTGCCATCCTCGACGTGGTGACGCGCTATGCCGTGC
ACTTCGGAAAGGATGGGGTCTCCTTCACCTGCAAGAAGgtccgtccctcc
cgccctccctccctctcgtcctccctcccgccctccctccctccctccct
cccaccctttcccacgcgctccagccttgatgcctgtcaaaagcacgaca
cctttatctcccttcctctgcccttcctctccccctccctcctcccaacc
ttcatcagCAAGGCCAAGCCCGCCCCGACCTCTACACCCCCCAGCGAGGG
GCCTCGGTTCTCAACAACATTAAAATTGCCTTCGGTCAGGTTCTGGGGAG
GGAGCTATTGGCCCTCGATCTCTCTTTCCCTTGCTCGCTCGCTGAGAGGG
AGGGAGGGAAGGAAGGGGGGGCTGCGCCCGGGAATGTAGAGAGGGAAGAG
GGGGAGGGAGGAAGGGAGGAAGGGCAACAAAAGCTGTCGTTCAAGGCCTT
TGGATATGTTTCGAATGCGAACTTTCATCTGAAGAAGGGTGTGTTTATGC
TCTTCATCAACAATCGGATGgtacgttcctccctccctccctcccaggtg
gaatccacggccaccaagcccgtccttcctctccctccctccctccctcc
ctccctccctccctccctctcagGTGGAATCCACGGCCATCAAGCGCACC
TTGGGAAGCATTTACGCACCCATTCTCCCTAACCACACCCACCCCTTCAT
CTACCTGGCCCTCGAGATGCCTCCCTCCCATGTAGACGTGAATGTGCACC
CTACGAAACGAGAGgtgggggggaagggagggagggagggagggagggag
ggaaagaggaacaggtggaatggatcacagggagtgagtaatgacatctg
cccctccctccttccctgtttccttccttcccctccctcagGTGCAATTT
CTTCACGAGGATCTGTTGCTCTCAAAGCTGGCCGCGGGCATTGAAGCCTT
GTTGAGCGGCGCGAATACTTCTAGAACGTTCTATGGGAAAAGCCTCGCGC
ATGgtgggtaaggaagggaaggaaggaaaagggggagggagggagggaaa
gaggaaggaagagaaaacaccacgtgtcctggcatcactcaagtaatgtt
tctcgtcctttctcttctcctctcatccccccccatctaccctccctccc
ttttccctctctccagGCCTCGCTCCACCCACGGACCTGACACAGGTCAT
CGGTGCCCCTCTTCCCCCCTCCCAATCCCAAGGCGGAAACGGGAGAGGGG
AAGAAGACAACAACAAGGCAGCAGCAGCAGCAACAGCAACAACCGCAGCA
GCAGAAGCGTGCAACAGCAGCAGCAGTGCCAAGCGCAAAGAGAAACAAGC
CCTCCTTCCCTATAAGATGATCCGGACAGATGCCAGCATGGGATCCCTCC
GTTCCTTCCTCTACACACCCGAGGAGGGGGAGCAGCAGCAGCAGCAGCAG
TACGACAAACATCTCTCTCAGCAGCAGCAGCAGCATGAGGAGGATGACGA
CTACGATGTTACTCAATCTCCCCCTCAAACCAACAGCAGCAACAGAAGCA
GCAGTAGCAACAGAAGCAGCAGTAGCAGCGCGGATACAGGCACTGCTGCT
GATGTGAGGGATCAGGGCGCCATCGCCCTCGTCACCGCGTCTGTCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTACCCTGACATGGGGAG
GAGGGAGGGAAGGAGGGAGGGACATGCACTACCGGCGAAGGCTGCCTTCG
TTCGTGGAGACCAAATGCCAGTATTTGAGCGTGCGGGCGCTATTGGCGGA
TATCCACGATCGGGTGCACCAgtaagaagggagggagggagggagggagg
acgggcggatgggcagcagggaggaagggaagaaggtgttgaacttattg
ttacattcactcttacaggtatgccgtcgctttctccctctctccctctc
tccctccctcgcttcccctgcccttcctccccccacagAGGCATGACCAC
CATCCTCAAAAAGCACATCTTCGTCGGCGCGGTGGACGATACTTTCTCCC
TCCTCCAGCACGACACCAAGCTCCTCCTCGTCCGCCACGTGGAGCTCTGC
AAGGAATTGTTTTACCAACTGGCCATTCGTCGATTTGGGTGCATGCCCAG
gtacgccccctcccgccctccttcccgctctccttccctccctccctcct
gtgcctccctgtctgcaggtactcgacaggtcctggccctcccatcctcc
ttctctccttccccctcccttttcatcttctcggtcatctcttcttctct
tttttctgtctcgctgctccggctgttgaacttcctcccctccctccttc
cctccctccttccctccctctccctcccttcccgcccttccacagACTCT
CCCTCGCCAGTAATCCGGTTCCTCTTCACTCCGCCCTCCGCGTAGCCCTG
GACCTCCCCGAGATGGACTGGAAGGAAGAATACGGTTCCAAAGATGAGgt
ccacaccctccctccctccctccctccctccctccctccctccctgcccc
cttccctcctttccttcctccttcgccttttcacttgattcttcctgctc
ccctcctccctccctccctccctccctccctccttccctccctcattccc
tcctttcctctctcccctaccagCTCGCCGAACGGGCCGCCGCAGTCCTC
CTTGCCAAAGCCGGGATGCTCGACGAATATTACCGCATCTCCTTCGACCC
CTGTGCTGACGAGGGAAGAGGGGCCTTGACCTCTCTCCCCGACTTGCTGC
CTCGCTTCACCCCTTCCCCTGCGGGCCTGCCCGTGTTTCTGCTGAGGCTG
GCCACGGAGGTGAATTGGGAGCAGGAGCAGGTGTGTTTTGAGGGCGTGGC
GACGGAGCTCGGGCTTTATTACAGTGATTTGTCCTGCCATTTCGAAGAGG
ACGAAGAGGGGGAAGAGGATGGGAAGGACGAGGAGGGGGGGAGTGAGAAA
AGGGAGGAAAAGGAGGAAGAGGAGGCGGACGACGAGGTGGTAGTTGTGGG
GGAGGAGGAGAAAGGGAAGGGGAAAGGGAGAAGAGAGAAGAAAAAGGAGG
AGGGAGGGAAGGAGGAAGGGGAGACAGGGCCTGTGCCCAAGAAGTATGAG
TATATGTTGCAGCATGTCTTGTACCCGGCGTTTCGGTCCGTTTTTCTTCC
ACCCCGAGAGTTAGCCGCACCCCAGGCGCAGGTGATAGTGCAGATTGCGG
CCTTGGAGCAGTTGTATAAGGTGTTTGAGCGATGTTGA

protein sequence of NO14G01030.1

>NO14G01030.1-protein ID=NO14G01030.1-protein|Name=NO14G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=946bp
MSDGDGHITQASSGSSSCAMSSWKAKEKVDDVPRIQRLEVDVVNRIAAGE
VVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDF
PLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSP
CAYKARFSDGKIIPFDAAAAAAGGGRGGGGGGGSGNPLPCAGTNGTTITV
EDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQA
RPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGG
AAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRM
VESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQF
LHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPL
PPSQSQGGNGRGEEDNNKAAAAATATTAAAEACNSSSSAKRKEKQALLPY
KMIRTDASMGSLRSFLYTPEEGEQQQQQQYDKHLSQQQQQHEEDDDYDVT
QSPPQTNSSNRSSSSNRSSSSSADTGTAADVRDQGAIALVTASVSSSSSS
SSSSSSSTLTWGGGREGGRDMHYRRRLPSFVETKCQYLSVRALLADIHDR
VHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIR
RFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVL
LAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRL
ATEVNWEQEQVCFEGVATELGLYYSDLSCHFEEDEEGEEDGKDEEGGSEK
REEKEEEEADDEVVVVGEEEKGKGKGRREKKKEEGGKEEGETGPVPKKYE
YMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC*

Synonyms

Publications