NO14G01030.1, NO14G01030.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G01030.1
Unique Name	NO14G01030.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2838
Alignment location	chr14:340039..344426 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:340039..344426 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO14G01030.1 vs.
Match: EWM24700.1 (dna mismatch repair protein mlh1 isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 765.4 bits (1975), Expect = 2.100e-217
Identity = 443/676 (65.53%), Postives = 493/676 (72.93%), Query Frame = 0

Query:    1 MSDGDGHITQASSGSSSCAMSSWKAKEKVDDVPRIQRLEVDVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDFPLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSPCAYKARFSDGKIIPFDAAAAAAGGGRGGGGGGGSGNPLPCAGTNGTTITVEDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQARPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGGA----APGNVEREEGEGGRE--------------EGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRMVESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQFLHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPLPPSQSQGGNGRGEEDNNKAAAAATATTAAAEACNSSSSAKRKEKQALLPYKMIRTDASMGSLRSFLYTPEEGEQQQQQQYDKHLSQQQQQHEEDDDYDVTQ--SPPQTNSSNRSSSSNRSSSSSADTGTAADVRDQGAIALVTASVSSSSSSSSSSSSSTLTWG---GGREGGRDMHYRRRLPSFVETKCQYLSVRALLADIHDRVHQ 654
            M  GDG  +  S+G++ C+           ++P I+RL+ DVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRV DFPLLCERFTTSKLR+F+DL+SIASFGFRGEALAS+THVA V++TSKT DSPCAYKARF DGK++P             G G GG+  P PCAGTNGTTIT EDLFYNM TRRQALKNPNDLYRA+LDVVTRYAVHFGKDG+SFTC+KQGQARPDLYTPQRGASVL  IK+AFGQVLGRELL L++S   S   REGG+EG +    +P   E    E GRE              +G++ LSFKA GYVSNANF++KKGVFMLFINNRMVESTAIKR + S+YAPILP HTHPF+YLAL++PP+HVDVNVHPTKREV FLHED LLSKLAAG+EALL GANTSRTFYGKSLAHGLAPPTDLTQVIGAP PP+  Q G+ R     +K         A          AKRKE+QALLPYKMIRTDASM +LRSFLYTPE  +   QQQ     SQ   Q E  D  D  Q  SP      +R+       S +       DVRD GA+ LV A            SSST T G   GGREGG+D HYRRRLPSF ETKCQYLSVRALLADIHDRVHQ
Sbjct:    1 MRGGDGTSSGKSTGNTLCSAQKDTLDTDSVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVP-------------GVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVS---SEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQ-GDDRSTMIEDKDIEGRDGEGAV--------QAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQ-----SQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVA------------SSSTATVGEREGGREGGKDRHYRRRLPSFTETKCQYLSVRALLADIHDRVHQ 634

The following BLAST results are available for this feature:

BLAST of NO14G01030.1 vs.

BLAST of NO14G01030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24700.1	2.100e-217	65.53	dna mismatch repair protein mlh1 isoform 1 [Nannoc...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO14G01030	NO14G01030	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO14G01030.1	NO14G01030.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO14G01030.1.cds1	NO14G01030.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds2	NO14G01030.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds3	NO14G01030.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds4	NO14G01030.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds5	NO14G01030.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds6	NO14G01030.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds7	NO14G01030.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds8	NO14G01030.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds9	NO14G01030.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds10	NO14G01030.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO14G01030.1.cds11	NO14G01030.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr14:340039..344426-
coding sequence from alignment at chr14:340039..344426-

mRNA sequence

>NO14G01030.1 ID=NO14G01030.1|Name=NO14G01030.1|organism=Nannochloropsis oceanica|type=mRNA|length=2838bp
ATGAGTGATGGCGACGGCCATATCACGCAAGCTAGCAGCGGCAGTAGTAG
CTGTGCCATGAGCAGCTGGAAAGCAAAAGAGAAGGTGGACGACGTCCCCC
GGATTCAGCGTCTGGAGGTCGATGTGGTGAATCGCATCGCGGCAGGCGAG
GTGGTGGCCAAGCCAGCTAATGCAGTCAAGGAGCTTGTTGAAAATAGTTT
GGACGCAGGTGCCAAATCGATAGTGGTAACAGTGAAGGATGGAGGCATGC
GCCTCTTACAGATCCAAGACGACGGGCACGGCATTCGGGTGGGCGATTTC
CCCCTCCTCTGCGAACGCTTCACTACTAGCAAGCTCCGAAACTTCGACGA
CTTGAAAAGCATTGCCTCCTTCGGGTTTAGAGGAGAGGCTCTTGCCAGCG
TCACCCACGTGGCTCATGTAACGGTCACGAGTAAAACGAGGGATAGCCCA
TGTGCCTACAAAGCCCGGTTCTCGGACGGGAAGATCATTCCGTTTGATGC
TGCGGCTGCTGCTGCAGGGGGAGGAAGAGGAGGAGGAGGGGGGGGAGGGA
GTGGAAATCCCTTGCCCTGCGCAGGGACGAATGGGACGACCATCACGGTG
GAAGACTTGTTCTACAACATGCATACGCGTCGACAAGCCCTCAAAAACCC
TAATGACCTCTACCGTGCCATCCTCGACGTGGTGACGCGCTATGCCGTGC
ACTTCGGAAAGGATGGGGTCTCCTTCACCTGCAAGAAGCAAGGCCAAGCC
CGCCCCGACCTCTACACCCCCCAGCGAGGGGCCTCGGTTCTCAACAACAT
TAAAATTGCCTTCGGTCAGGTTCTGGGGAGGGAGCTATTGGCCCTCGATC
TCTCTTTCCCTTGCTCGCTCGCTGAGAGGGAGGGAGGGAAGGAAGGGGGG
GCTGCGCCCGGGAATGTAGAGAGGGAAGAGGGGGAGGGAGGAAGGGAGGA
AGGGCAACAAAAGCTGTCGTTCAAGGCCTTTGGATATGTTTCGAATGCGA
ACTTTCATCTGAAGAAGGGTGTGTTTATGCTCTTCATCAACAATCGGATG
GTGGAATCCACGGCCATCAAGCGCACCTTGGGAAGCATTTACGCACCCAT
TCTCCCTAACCACACCCACCCCTTCATCTACCTGGCCCTCGAGATGCCTC
CCTCCCATGTAGACGTGAATGTGCACCCTACGAAACGAGAGGTGCAATTT
CTTCACGAGGATCTGTTGCTCTCAAAGCTGGCCGCGGGCATTGAAGCCTT
GTTGAGCGGCGCGAATACTTCTAGAACGTTCTATGGGAAAAGCCTCGCGC
ATGGCCTCGCTCCACCCACGGACCTGACACAGGTCATCGGTGCCCCTCTT
CCCCCCTCCCAATCCCAAGGCGGAAACGGGAGAGGGGAAGAAGACAACAA
CAAGGCAGCAGCAGCAGCAACAGCAACAACCGCAGCAGCAGAAGCGTGCA
ACAGCAGCAGCAGTGCCAAGCGCAAAGAGAAACAAGCCCTCCTTCCCTAT
AAGATGATCCGGACAGATGCCAGCATGGGATCCCTCCGTTCCTTCCTCTA
CACACCCGAGGAGGGGGAGCAGCAGCAGCAGCAGCAGTACGACAAACATC
TCTCTCAGCAGCAGCAGCAGCATGAGGAGGATGACGACTACGATGTTACT
CAATCTCCCCCTCAAACCAACAGCAGCAACAGAAGCAGCAGTAGCAACAG
AAGCAGCAGTAGCAGCGCGGATACAGGCACTGCTGCTGATGTGAGGGATC
AGGGCGCCATCGCCCTCGTCACCGCGTCTGTCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCTACCCTGACATGGGGAGGAGGGAGGGAAGG
AGGGAGGGACATGCACTACCGGCGAAGGCTGCCTTCGTTCGTGGAGACCA
AATGCCAGTATTTGAGCGTGCGGGCGCTATTGGCGGATATCCACGATCGG
GTGCACCAAGGCATGACCACCATCCTCAAAAAGCACATCTTCGTCGGCGC
GGTGGACGATACTTTCTCCCTCCTCCAGCACGACACCAAGCTCCTCCTCG
TCCGCCACGTGGAGCTCTGCAAGGAATTGTTTTACCAACTGGCCATTCGT
CGATTTGGGTGCATGCCCAGACTCTCCCTCGCCAGTAATCCGGTTCCTCT
TCACTCCGCCCTCCGCGTAGCCCTGGACCTCCCCGAGATGGACTGGAAGG
AAGAATACGGTTCCAAAGATGAGCTCGCCGAACGGGCCGCCGCAGTCCTC
CTTGCCAAAGCCGGGATGCTCGACGAATATTACCGCATCTCCTTCGACCC
CTGTGCTGACGAGGGAAGAGGGGCCTTGACCTCTCTCCCCGACTTGCTGC
CTCGCTTCACCCCTTCCCCTGCGGGCCTGCCCGTGTTTCTGCTGAGGCTG
GCCACGGAGGTGAATTGGGAGCAGGAGCAGGTGTGTTTTGAGGGCGTGGC
GACGGAGCTCGGGCTTTATTACAGTGATTTGTCCTGCCATTTCGAAGAGG
ACGAAGAGGGGGAAGAGGATGGGAAGGACGAGGAGGGGGGGAGTGAGAAA
AGGGAGGAAAAGGAGGAAGAGGAGGCGGACGACGAGGTGGTAGTTGTGGG
GGAGGAGGAGAAAGGGAAGGGGAAAGGGAGAAGAGAGAAGAAAAAGGAGG
AGGGAGGGAAGGAGGAAGGGGAGACAGGGCCTGTGCCCAAGAAGTATGAG
TATATGTTGCAGCATGTCTTGTACCCGGCGTTTCGGTCCGTTTTTCTTCC
ACCCCGAGAGTTAGCCGCACCCCAGGCGCAGGTGATAGTGCAGATTGCGG
CCTTGGAGCAGTTGTATAAGGTGTTTGAGCGATGTTGA

protein sequence of NO14G01030.1

>NO14G01030.1-protein ID=NO14G01030.1-protein|Name=NO14G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=946bp
MSDGDGHITQASSGSSSCAMSSWKAKEKVDDVPRIQRLEVDVVNRIAAGE
VVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVGDF
PLLCERFTTSKLRNFDDLKSIASFGFRGEALASVTHVAHVTVTSKTRDSP
CAYKARFSDGKIIPFDAAAAAAGGGRGGGGGGGSGNPLPCAGTNGTTITV
EDLFYNMHTRRQALKNPNDLYRAILDVVTRYAVHFGKDGVSFTCKKQGQA
RPDLYTPQRGASVLNNIKIAFGQVLGRELLALDLSFPCSLAEREGGKEGG
AAPGNVEREEGEGGREEGQQKLSFKAFGYVSNANFHLKKGVFMLFINNRM
VESTAIKRTLGSIYAPILPNHTHPFIYLALEMPPSHVDVNVHPTKREVQF
LHEDLLLSKLAAGIEALLSGANTSRTFYGKSLAHGLAPPTDLTQVIGAPL
PPSQSQGGNGRGEEDNNKAAAAATATTAAAEACNSSSSAKRKEKQALLPY
KMIRTDASMGSLRSFLYTPEEGEQQQQQQYDKHLSQQQQQHEEDDDYDVT
QSPPQTNSSNRSSSSNRSSSSSADTGTAADVRDQGAIALVTASVSSSSSS
SSSSSSSTLTWGGGREGGRDMHYRRRLPSFVETKCQYLSVRALLADIHDR
VHQGMTTILKKHIFVGAVDDTFSLLQHDTKLLLVRHVELCKELFYQLAIR
RFGCMPRLSLASNPVPLHSALRVALDLPEMDWKEEYGSKDELAERAAAVL
LAKAGMLDEYYRISFDPCADEGRGALTSLPDLLPRFTPSPAGLPVFLLRL
ATEVNWEQEQVCFEGVATELGLYYSDLSCHFEEDEEGEEDGKDEEGGSEK
REEKEEEEADDEVVVVGEEEKGKGKGRREKKKEEGGKEEGETGPVPKKYE
YMLQHVLYPAFRSVFLPPRELAAPQAQVIVQIAALEQLYKVFERC*

mRNA from alignment at chr14:340039..344426-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO14G01030.1 ID=NO14G01030.1|Name=NO14G01030.1|organism=Nannochloropsis oceanica|type=mRNA|length=4388bp|location=Sequence derived from alignment at chr14:340039..344426- (Nannochloropsis oceanica)
ATGAGTGATGGCGACGGCCATATCACGCAAGCTAGCAGCGGCAGTAGTAG
CTGTGCCATGAGCAGCTGGAAAGCAAAAGAGAAGGTGGACGACGTCCCCC
GGATTCAGCGTCTGGAGGTCGATGTGGTGAATCGCATCGCGGCAGGCGAG
GTGGTGGCCAAGCCAGCTAATGCAGTCAAGGTAGGAAAGAATGGTCTAAG
AGGGCGAAATCATGGCATGATGAGGAATAGGAGGAGGAGAAGGAAGAATA
AGGAAAGGAAAGAGTCAGGGGAGTGACAACAACGAGCACTTCATCGCTCT
CCTCACCTCCGCTCTCTCCGTTTCACAGGAGCTTGTTGAAAATAGTTTGG
ACGCAGGTGCCAAATCGATAGTGGTAACAGTGAAGGATGGAGGCATGCGC
CTCTTACAGATCCAAGACGACGGGCACGGCATTCGGGTGCGTACACGCCC
TCCTTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCCTCATTCCCT
TCGTTACCAGCTTCCATCCCTCCCTCCCTCCCTCCCTCCATCCCTCCATC
CCTTCCTTCATCCTGTCTTTCAGGTGGGCGATTTCCCCCTCCTCTGCGAA
CGCTTCACTACTAGCAAGCTCCGAAACTTCGACGACTTGAAAAGCATTGC
CTCCTTCGGGTTTAGAGGAGAGGCTCTTGCCAGCGTCACCCACGTGGCTC
ATGTAACGGTCACGAGTAAAACGAGGGATAGCCCATGTGCCTACAAAGCC
CGGTTCTCGGACGGGAAGATCATTCCGTTTGATGCTGCGGCTGCTGCTGC
AGGGGGAGGAAGAGGAGGAGGAGGGGGGGGAGGGAGTGGAAATCCCTTGC
CCTGCGCAGGGACGAATGGGACGACCATCACGGTAAGAAGGGAGGGAGGG
AGGTGAAGAGGGAATAAGGGAAGGAGGGAAGGAGAGAGGGGGATTATCTA
AGTATAAATGATTGGCTCACCCCTCCCCATCCCTCCCCCTCACCCAGGTG
GAAGACTTGTTCTACAACATGCATACGCGTCGACAAGCCCTCAAAAACCC
TAATGACCTCTACCGTGCCATCCTCGACGTGGTGACGCGCTATGCCGTGC
ACTTCGGAAAGGATGGGGTCTCCTTCACCTGCAAGAAGGTCCGTCCCTCC
CGCCCTCCCTCCCTCTCGTCCTCCCTCCCGCCCTCCCTCCCTCCCTCCCT
CCCACCCTTTCCCACGCGCTCCAGCCTTGATGCCTGTCAAAAGCACGACA
CCTTTATCTCCCTTCCTCTGCCCTTCCTCTCCCCCTCCCTCCTCCCAACC
TTCATCAGCAAGGCCAAGCCCGCCCCGACCTCTACACCCCCCAGCGAGGG
GCCTCGGTTCTCAACAACATTAAAATTGCCTTCGGTCAGGTTCTGGGGAG
GGAGCTATTGGCCCTCGATCTCTCTTTCCCTTGCTCGCTCGCTGAGAGGG
AGGGAGGGAAGGAAGGGGGGGCTGCGCCCGGGAATGTAGAGAGGGAAGAG
GGGGAGGGAGGAAGGGAGGAAGGGCAACAAAAGCTGTCGTTCAAGGCCTT
TGGATATGTTTCGAATGCGAACTTTCATCTGAAGAAGGGTGTGTTTATGC
TCTTCATCAACAATCGGATGGTACGTTCCTCCCTCCCTCCCTCCCAGGTG
GAATCCACGGCCACCAAGCCCGTCCTTCCTCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCTCAGGTGGAATCCACGGCCATCAAGCGCACC
TTGGGAAGCATTTACGCACCCATTCTCCCTAACCACACCCACCCCTTCAT
CTACCTGGCCCTCGAGATGCCTCCCTCCCATGTAGACGTGAATGTGCACC
CTACGAAACGAGAGGTGGGGGGGAAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAAAGAGGAACAGGTGGAATGGATCACAGGGAGTGAGTAATGACATCTG
CCCCTCCCTCCTTCCCTGTTTCCTTCCTTCCCCTCCCTCAGGTGCAATTT
CTTCACGAGGATCTGTTGCTCTCAAAGCTGGCCGCGGGCATTGAAGCCTT
GTTGAGCGGCGCGAATACTTCTAGAACGTTCTATGGGAAAAGCCTCGCGC
ATGGTGGGTAAGGAAGGGAAGGAAGGAAAAGGGGGAGGGAGGGAGGGAAA
GAGGAAGGAAGAGAAAACACCACGTGTCCTGGCATCACTCAAGTAATGTT
TCTCGTCCTTTCTCTTCTCCTCTCATCCCCCCCCATCTACCCTCCCTCCC
TTTTCCCTCTCTCCAGGCCTCGCTCCACCCACGGACCTGACACAGGTCAT
CGGTGCCCCTCTTCCCCCCTCCCAATCCCAAGGCGGAAACGGGAGAGGGG
AAGAAGACAACAACAAGGCAGCAGCAGCAGCAACAGCAACAACCGCAGCA
GCAGAAGCGTGCAACAGCAGCAGCAGTGCCAAGCGCAAAGAGAAACAAGC
CCTCCTTCCCTATAAGATGATCCGGACAGATGCCAGCATGGGATCCCTCC
GTTCCTTCCTCTACACACCCGAGGAGGGGGAGCAGCAGCAGCAGCAGCAG
TACGACAAACATCTCTCTCAGCAGCAGCAGCAGCATGAGGAGGATGACGA
CTACGATGTTACTCAATCTCCCCCTCAAACCAACAGCAGCAACAGAAGCA
GCAGTAGCAACAGAAGCAGCAGTAGCAGCGCGGATACAGGCACTGCTGCT
GATGTGAGGGATCAGGGCGCCATCGCCCTCGTCACCGCGTCTGTCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTACCCTGACATGGGGAG
GAGGGAGGGAAGGAGGGAGGGACATGCACTACCGGCGAAGGCTGCCTTCG
TTCGTGGAGACCAAATGCCAGTATTTGAGCGTGCGGGCGCTATTGGCGGA
TATCCACGATCGGGTGCACCAGTAAGAAGGGAGGGAGGGAGGGAGGGAGG
ACGGGCGGATGGGCAGCAGGGAGGAAGGGAAGAAGGTGTTGAACTTATTG
TTACATTCACTCTTACAGGTATGCCGTCGCTTTCTCCCTCTCTCCCTCTC
TCCCTCCCTCGCTTCCCCTGCCCTTCCTCCCCCCACAGAGGCATGACCAC
CATCCTCAAAAAGCACATCTTCGTCGGCGCGGTGGACGATACTTTCTCCC
TCCTCCAGCACGACACCAAGCTCCTCCTCGTCCGCCACGTGGAGCTCTGC
AAGGAATTGTTTTACCAACTGGCCATTCGTCGATTTGGGTGCATGCCCAG
GTACGCCCCCTCCCGCCCTCCTTCCCGCTCTCCTTCCCTCCCTCCCTCCT
GTGCCTCCCTGTCTGCAGGTACTCGACAGGTCCTGGCCCTCCCATCCTCC
TTCTCTCCTTCCCCCTCCCTTTTCATCTTCTCGGTCATCTCTTCTTCTCT
TTTTTCTGTCTCGCTGCTCCGGCTGTTGAACTTCCTCCCCTCCCTCCTTC
CCTCCCTCCTTCCCTCCCTCTCCCTCCCTTCCCGCCCTTCCACAGACTCT
CCCTCGCCAGTAATCCGGTTCCTCTTCACTCCGCCCTCCGCGTAGCCCTG
GACCTCCCCGAGATGGACTGGAAGGAAGAATACGGTTCCAAAGATGAGGT
CCACACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCCCC
CTTCCCTCCTTTCCTTCCTCCTTCGCCTTTTCACTTGATTCTTCCTGCTC
CCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCATTCCC
TCCTTTCCTCTCTCCCCTACCAGCTCGCCGAACGGGCCGCCGCAGTCCTC
CTTGCCAAAGCCGGGATGCTCGACGAATATTACCGCATCTCCTTCGACCC
CTGTGCTGACGAGGGAAGAGGGGCCTTGACCTCTCTCCCCGACTTGCTGC
CTCGCTTCACCCCTTCCCCTGCGGGCCTGCCCGTGTTTCTGCTGAGGCTG
GCCACGGAGGTGAATTGGGAGCAGGAGCAGGTGTGTTTTGAGGGCGTGGC
GACGGAGCTCGGGCTTTATTACAGTGATTTGTCCTGCCATTTCGAAGAGG
ACGAAGAGGGGGAAGAGGATGGGAAGGACGAGGAGGGGGGGAGTGAGAAA
AGGGAGGAAAAGGAGGAAGAGGAGGCGGACGACGAGGTGGTAGTTGTGGG
GGAGGAGGAGAAAGGGAAGGGGAAAGGGAGAAGAGAGAAGAAAAAGGAGG
AGGGAGGGAAGGAGGAAGGGGAGACAGGGCCTGTGCCCAAGAAGTATGAG
TATATGTTGCAGCATGTCTTGTACCCGGCGTTTCGGTCCGTTTTTCTTCC
ACCCCGAGAGTTAGCCGCACCCCAGGCGCAGGTGATAGTGCAGATTGCGG
CCTTGGAGCAGTTGTATAAGGTGTTTGAGCGATGTTGA

Coding sequence (CDS) from alignment at chr14:340039..344426-

>NO14G01030.1 ID=NO14G01030.1|Name=NO14G01030.1|organism=Nannochloropsis oceanica|type=CDS|length=2838bp|location=Sequence derived from alignment at chr14:340039..344426- (Nannochloropsis oceanica)
ATGAGTGATGGCGACGGCCATATCACGCAAGCTAGCAGCGGCAGTAGTAG
CTGTGCCATGAGCAGCTGGAAAGCAAAAGAGAAGGTGGACGACGTCCCCC
GGATTCAGCGTCTGGAGGTCGATGTGGTGAATCGCATCGCGGCAGGCGAG
GTGGTGGCCAAGCCAGCTAATGCAGTCAAGGAGCTTGTTGAAAATAGTTT
GGACGCAGGTGCCAAATCGATAGTGGTAACAGTGAAGGATGGAGGCATGC
GCCTCTTACAGATCCAAGACGACGGGCACGGCATTCGGGTGGGCGATTTC
CCCCTCCTCTGCGAACGCTTCACTACTAGCAAGCTCCGAAACTTCGACGA
CTTGAAAAGCATTGCCTCCTTCGGGTTTAGAGGAGAGGCTCTTGCCAGCG
TCACCCACGTGGCTCATGTAACGGTCACGAGTAAAACGAGGGATAGCCCA
TGTGCCTACAAAGCCCGGTTCTCGGACGGGAAGATCATTCCGTTTGATGC
TGCGGCTGCTGCTGCAGGGGGAGGAAGAGGAGGAGGAGGGGGGGGAGGGA
GTGGAAATCCCTTGCCCTGCGCAGGGACGAATGGGACGACCATCACGGTG
GAAGACTTGTTCTACAACATGCATACGCGTCGACAAGCCCTCAAAAACCC
TAATGACCTCTACCGTGCCATCCTCGACGTGGTGACGCGCTATGCCGTGC
ACTTCGGAAAGGATGGGGTCTCCTTCACCTGCAAGAAGCAAGGCCAAGCC
CGCCCCGACCTCTACACCCCCCAGCGAGGGGCCTCGGTTCTCAACAACAT
TAAAATTGCCTTCGGTCAGGTTCTGGGGAGGGAGCTATTGGCCCTCGATC
TCTCTTTCCCTTGCTCGCTCGCTGAGAGGGAGGGAGGGAAGGAAGGGGGG
GCTGCGCCCGGGAATGTAGAGAGGGAAGAGGGGGAGGGAGGAAGGGAGGA
AGGGCAACAAAAGCTGTCGTTCAAGGCCTTTGGATATGTTTCGAATGCGA
ACTTTCATCTGAAGAAGGGTGTGTTTATGCTCTTCATCAACAATCGGATG
GTGGAATCCACGGCCATCAAGCGCACCTTGGGAAGCATTTACGCACCCAT
TCTCCCTAACCACACCCACCCCTTCATCTACCTGGCCCTCGAGATGCCTC
CCTCCCATGTAGACGTGAATGTGCACCCTACGAAACGAGAGGTGCAATTT
CTTCACGAGGATCTGTTGCTCTCAAAGCTGGCCGCGGGCATTGAAGCCTT
GTTGAGCGGCGCGAATACTTCTAGAACGTTCTATGGGAAAAGCCTCGCGC
ATGGCCTCGCTCCACCCACGGACCTGACACAGGTCATCGGTGCCCCTCTT
CCCCCCTCCCAATCCCAAGGCGGAAACGGGAGAGGGGAAGAAGACAACAA
CAAGGCAGCAGCAGCAGCAACAGCAACAACCGCAGCAGCAGAAGCGTGCA
ACAGCAGCAGCAGTGCCAAGCGCAAAGAGAAACAAGCCCTCCTTCCCTAT
AAGATGATCCGGACAGATGCCAGCATGGGATCCCTCCGTTCCTTCCTCTA
CACACCCGAGGAGGGGGAGCAGCAGCAGCAGCAGCAGTACGACAAACATC
TCTCTCAGCAGCAGCAGCAGCATGAGGAGGATGACGACTACGATGTTACT
CAATCTCCCCCTCAAACCAACAGCAGCAACAGAAGCAGCAGTAGCAACAG
AAGCAGCAGTAGCAGCGCGGATACAGGCACTGCTGCTGATGTGAGGGATC
AGGGCGCCATCGCCCTCGTCACCGCGTCTGTCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCTACCCTGACATGGGGAGGAGGGAGGGAAGG
AGGGAGGGACATGCACTACCGGCGAAGGCTGCCTTCGTTCGTGGAGACCA
AATGCCAGTATTTGAGCGTGCGGGCGCTATTGGCGGATATCCACGATCGG
GTGCACCAAGGCATGACCACCATCCTCAAAAAGCACATCTTCGTCGGCGC
GGTGGACGATACTTTCTCCCTCCTCCAGCACGACACCAAGCTCCTCCTCG
TCCGCCACGTGGAGCTCTGCAAGGAATTGTTTTACCAACTGGCCATTCGT
CGATTTGGGTGCATGCCCAGACTCTCCCTCGCCAGTAATCCGGTTCCTCT
TCACTCCGCCCTCCGCGTAGCCCTGGACCTCCCCGAGATGGACTGGAAGG
AAGAATACGGTTCCAAAGATGAGCTCGCCGAACGGGCCGCCGCAGTCCTC
CTTGCCAAAGCCGGGATGCTCGACGAATATTACCGCATCTCCTTCGACCC
CTGTGCTGACGAGGGAAGAGGGGCCTTGACCTCTCTCCCCGACTTGCTGC
CTCGCTTCACCCCTTCCCCTGCGGGCCTGCCCGTGTTTCTGCTGAGGCTG
GCCACGGAGGTGAATTGGGAGCAGGAGCAGGTGTGTTTTGAGGGCGTGGC
GACGGAGCTCGGGCTTTATTACAGTGATTTGTCCTGCCATTTCGAAGAGG
ACGAAGAGGGGGAAGAGGATGGGAAGGACGAGGAGGGGGGGAGTGAGAAA
AGGGAGGAAAAGGAGGAAGAGGAGGCGGACGACGAGGTGGTAGTTGTGGG
GGAGGAGGAGAAAGGGAAGGGGAAAGGGAGAAGAGAGAAGAAAAAGGAGG
AGGGAGGGAAGGAGGAAGGGGAGACAGGGCCTGTGCCCAAGAAGTATGAG
TATATGTTGCAGCATGTCTTGTACCCGGCGTTTCGGTCCGTTTTTCTTCC
ACCCCGAGAGTTAGCCGCACCCCAGGCGCAGGTGATAGTGCAGATTGCGG
CCTTGGAGCAGTTGTATAAGGTGTTTGAGCGATGTTGA

Synonyms

Publications