NO13G00260, NO13G00260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00260 vs. NCBI_GenBank
Match: EWM22838.1 (hypothetical protein Naga_100295g2 [Nannochloropsis gaditana]) HSP 1 Score: 408.3 bits (1048), Expect = 2.500e-110 Identity = 210/353 (59.49%), Postives = 258/353 (73.09%), Query Frame = 0 Query: 7 SLRSTVRQRFANLTEQYPTGMVR-ARSASKTLGTCLTIVMAVVYMSMIYLVVGRVSSPSLSLLNATTSTSYSTNLRGASXXXXXPSLSKFRNNPLPSLPNSAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPWDAH 359 S+ S + R T++ G +R +A T + I MAV+Y+ I L+ GR PS S T + S+ RG+S RN+ + + +L HLI+VAGHAVTI+ESLEG E +D VWYLLPYQ+ QDLPATFV+HI+ GV LA+RDPASLL+FSGGQTR +AGP SEG++YYRVAEHFGWWD AS PS +VK RAL E+YALDS ENLLYSICRFKEYT HYPTRI+VVSFAFK+ RF HHR ALRFP+++F ++G+DPP G+FD KKA +GE ++A+KLFESDPYGC+SK LQEK A RNPF RT PY +CPE+APLLEYC+ TIYP LPWD+H Sbjct: 20 SVLSDFKGRDIQETQERNYGAMRYTMNAKGCRATRIAIAMAVLYLYSIVLLKGRRFMPS-SSSPPTPTLGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPS-DVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPWDSH 370
BLAST of NO13G00260 vs. NCBI_GenBank
Match: OLP92244.1 (Uncharacterized protein C57A10.07 [Symbiodinium microadriaticum]) HSP 1 Score: 284.6 bits (727), Expect = 4.100e-73 Identity = 144/291 (49.48%), Postives = 184/291 (63.23%), Query Frame = 0 Query: 109 LTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSP----------------EVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFK----------------------------RARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPW 356 L+HL++VAGHAV + +SLE + ++ W+L YQ+ QDLP V+HIKAGV A DP +LL+FSGGQTR AGP +EG +YYRVAE+F WW +++ V RA+ EE+ALDSF+N+L+S+CRFKE G YP R+T+VSF FK R RF HRGALRFP A+F Y+G+ PPP RFD KA GE H+A KLF+SDPYGCHS+TL EKR +RNPF+RT PY L+CPE+ LL++C I+ ALPW Sbjct: 92 LSHLVMVAGHAVVMADSLEHIVHKESDWFLEAYQRGQDLPQALVSHIKAGVEAAALDPRALLIFSGGQTRAAAGPRNEGWSYYRVAEYFDWWGYSANRPDLLREAQQRTQRTSTFLPVAQRAVTEEFALDSFQNVLFSLCRFKEVVGRYPDRVTIVSFTFKKPPAIALRLGLGACYGLLPNEGFLTSPPRQRFSELHRGALRFPSARFSYIGIQPPPGSRFDVVKAESGE-HEAAKLFQSDPYGCHSQTLVEKRRARNPFQRTTPYLLSCPELKALLQWCGPDIFRGALPW 381
BLAST of NO13G00260 vs. NCBI_GenBank
Match: GAX20826.1 (hypothetical protein FisN_7Hh140 [Fistulifera solaris]) HSP 1 Score: 275.0 bits (702), Expect = 3.300e-70 Identity = 130/252 (51.59%), Postives = 179/252 (71.03%), Query Frame = 0 Query: 106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPE-VKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP-HALPW 356 ++A +LI+VAGH+VTI+ LE ++++ W+LL YQ+ + LP V HI+AG++ AQ+DP SLLVFSGG+TR GP +EGA+YYRV + W PSP V+ R + E++A DSFENL++SICRF+E TG YP ITVVSF+FK+ RF + H ALR+P +F+Y+G+DPP F ++A +GE +++K F+SDPYGCHSK LQEKR RNPF RT PY L+CPE++ LL +C + P +PW Sbjct: 76 ASAAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLW-----PSPSTVRARTITEDFATDSFENLMFSICRFREVTGSYPNTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPPASTGFKLEEATKGELENSVKPFQSDPYGCHSKILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322
BLAST of NO13G00260 vs. NCBI_GenBank
Match: XP_002178493.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50158.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 269.6 bits (688), Expect = 1.400e-68 Identity = 130/251 (51.79%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHA-LPW 356 +A HLI+VAGH+V I+ LE ++ WYLLPYQK + LPA V HI G++ A+ D SLL+FSGG+TR GP +EGA+YYRVA+ W S V+ R ++EE+A DSFENL++SICRF+E TG YP ++TVVSF FK+ RF H AL++P+ F Y+G+DP F+ ++AV GE +A K FE DPYGCHS+ LQEKR SRNPF+RT PY L+CP++ LL YC I P + +PW Sbjct: 15 AANAKHLIIVAGHSVAISGHLEDAGRDETDWYLLPYQKNRGLPAAIVGHINTGLNAAEEDEQSLLIFSGGETRASTGPETEGASYYRVADAMNLWPENS----SVRARTISEEFATDSFENLMFSICRFQEITGSYPEKVTVVSFTFKKRRFEELHAQALQWPKQSFSYIGVDPEANTGFNLQEAVVGELENAAKPFEIDPYGCHSQVLQEKRRSRNPFKRTPPYELSCPDMKELLSYCGPAIIPKSKVPW 261
BLAST of NO13G00260 vs. NCBI_GenBank
Match: GAX11759.1 (hypothetical protein FisN_7Lh140 [Fistulifera solaris]) HSP 1 Score: 267.7 bits (683), Expect = 5.200e-68 Identity = 126/251 (50.20%), Postives = 177/251 (70.52%), Query Frame = 0 Query: 106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP-HALPW 356 +++ +LI+VAGH+VTI+ LE ++++ W+LL YQ+ + LP V HI+AG++ AQ+DP SLLVFSGG+TR GP +EGA+YYRV + W S V+ R + E++A DSFENL++SICRF+E TG YP ITVVSF+FK+ RF + H ALR+P +F+Y+G+DP F ++A++GE +++K F+SDPYGCHSK LQEKR RNPF RT PY L+CPE++ LL +C + P +PW Sbjct: 76 ASSAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLWPSQS----TVRARTITEDFATDSFENLMFSICRFREVTGSYPDTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPSASTGFVLEEAMKGELENSVKPFQSDPYGCHSKILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322
BLAST of NO13G00260 vs. NCBI_GenBank
Match: CBJ30413.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 262.3 bits (669), Expect = 2.200e-66 Identity = 129/251 (51.39%), Postives = 167/251 (66.53%), Query Frame = 0 Query: 106 SAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCH-SKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHALPW 356 S LTHLI+V H VT+TESLEG + D W+LL YQK +D+P V HI+ G+ D +LL+FSGG+TR AGP SEG +Y+ VA+H+ WW P+++ RA E++A DSFEN+L+SICRFKE TG YPT+ITVV F FK RF H +LRFP F Y+GL PEGRFD A EGE AL+ + SDPYGC TL +KR +R+PF RT PY++ CPE++ LL +C+ ++ LPW Sbjct: 120 SKELTHLIMVPCHGVTVTESLEGADSRDGDWFLLDYQKGKDVPRALVGHIQGGLDALDADENALLLFSGGKTRGPAGPKSEGESYFFVADHYDWWG-----KPDLRARASTEDFARDSFENVLFSICRFKEITGDYPTKITVVGFDFKEDRFEHLHMPSLRFPPEAFRYVGLH--PEGRFDHAAAAEGERTSALEPYRSDPYGCAVGGTLVQKRHARDPFHRTPPYSMVCPEMSELLGWCETELFTGDLPW 363
BLAST of NO13G00260 vs. NCBI_GenBank
Match: OEU10241.1 (hypothetical protein FRACYDRAFT_151991, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 257.7 bits (657), Expect = 5.400e-65 Identity = 124/246 (50.41%), Postives = 166/246 (67.48%), Query Frame = 0 Query: 111 HLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYC-QRTIYPHALPW 356 +L++VAGH+VT++ L+ ++ W+LL YQK Q LP AHI AG+ A++DP SLLVFSGG+TR +GP +E AYY VA+ W ++ V+ R EE+A DSFENL++SICRF+E TG YP +ITVVSF+FKR RF + H ALR+P +F Y+G+DPP FD +++ EGE +A F DPYGCH+ LQEKR SRNPF+RT PY L+CPE+ LL++C I +PW Sbjct: 1 NLVMVAGHSVTVSGHLQDAGSDESDWFLLGYQKGQGLPQAIHAHITAGIEEARKDPKSLLVFSGGETRAISGPQTEAQAYYHVADAMNLW--LTNDGSSVRARTTTEEFATDSFENLMFSICRFREITGEYPKKITVVSFSFKRRRFETLHAPALRWPADRFAYIGVDPPASTGFDLQRSTEGESKNAAAPFAQDPYGCHTAVLQEKRNSRNPFQRTPPYGLSCPEMKELLQFCGPEFISVQLIPW 244
BLAST of NO13G00260 vs. NCBI_GenBank
Match: EJK44735.1 (hypothetical protein THAOC_36702, partial [Thalassiosira oceanica]) HSP 1 Score: 256.9 bits (655), Expect = 9.200e-65 Identity = 131/263 (49.81%), Postives = 171/263 (65.02%), Query Frame = 0 Query: 105 NSAALTHLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWD------PAS-----DPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYC-QRTIYPHALPW 356 ++A THLI+VAGH+V I+ +E ++ VW+LL YQK LP + + HI+AG+ LA DP SLLVFSGGQTR GP SEG++YYRVA+ WD P+S + V+ R EE+ALDSF+NLL+SICRF E TG YP R++++SF FK+ RF + H AL PE F ++G+DPPP FD K++ EGE ++L F DPYGCHS+ LQ KR RNPF RT PY L CPE+ LL++C I +PW Sbjct: 5 SAAKATHLIIVAGHSVLISGDVENAATDESVWWLLDYQKNHGLPQSILGHIQAGIQLAMEDPDSLLVFSGGQTRGQTGPESEGSSYYRVADALHLWDGRKAFPPSSIRRQANQQSTVRARTTTEEFALDSFQNLLFSICRFHEVTGSYPDRVSMISFTFKQERFETLHAQALLLPE--FVFVGVDPPPSTGFDLKQSSEGERINSLLPFRIDPYGCHSEVLQRKRKERNPFSRTPPYELTCPEMKDLLKWCGPEIIEKSKVPW 265
BLAST of NO13G00260 vs. NCBI_GenBank
Match: XP_002290220.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED91972.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 256.5 bits (654), Expect = 1.200e-64 Identity = 123/247 (49.80%), Postives = 167/247 (67.61%), Query Frame = 0 Query: 110 THLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVEGEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYPHA-LPW 356 THLI+VAGH+V ++ ++ ++ VW+LL YQ+ + LP V+HI+AG+ LA D SLLVFSGG+TR GP +EG +Y+R P+ V+ R + EEYA DSFENLL+SICRF + TG YP +IT+VSF+FK+ RF S H GAL++P A+F+Y+G+DPP FD ++ EGE ++L F SDPYGCH++ LQ+KR RNPF RT PY L CPE+ LL +C + P A +PW Sbjct: 1 THLIIVAGHSVLVSGDVDKAAFDESVWFLLDYQRNRGLPQAIVSHIQAGIQLALEDDKSLLVFSGGETRARTGPETEGGSYFRAG-------PSIHKQSTVRARTITEEYATDSFENLLFSICRFHDVTGSYPEKITIVSFSFKQERFESLHAGALQWPIARFDYVGVDPPSSTGFDLNESSEGEKRNSLVPFTSDPYGCHTELLQQKRKERNPFARTPPYDLTCPEMKELLHWCGPELIPKASVPW 240
BLAST of NO13G00260 vs. NCBI_GenBank
Match: GBG28515.1 (Hypothetical Protein FCC1311_047382 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 253.8 bits (647), Expect = 7.800e-64 Identity = 124/249 (49.80%), Postives = 164/249 (65.86%), Query Frame = 0 Query: 111 HLIVVAGHAVTITESLEGVEEEDHVWYLLPYQKAQDLPATFVAHIKAGVSLAQRDPASLLVFSGGQTRVDAGPWSEGAAYYRVAEHFGWWDPASDPSPEVKGRALAEEYALDSFENLLYSICRFKEYTGHYPTRITVVSFAFKRARFLSHHRGALRFPEAQFEYMGLDPPPEGRFDRKKAVE-GEYHDALKLFESDPYGCHSKTLQEKRASRNPFRRTAPYALACPEIAPLLEYCQRTIYP-HALPWDA 358 +LI+VA H++T+ ESLEGV+ D W L+ YQK +P F HI+ G+ LA DP +L++FSGGQTR+ AGP SE +Y+ VA+HFGWW +S + EV+ RA EEY+ DS ENLL+S+CRF E +G YP +TVV + FK+ RF HR ALR+P F Y+G+DP R +E E +L F DPYGCHS+ L+ KR RNPF R + L+CPEI+ LL YC+R +YP LPWD+ Sbjct: 61 NLILVACHSITVGESLEGVDVRDDRWMLVDYQKHASMPQAFTGHIRKGIELALEDPHALVIFSGGQTRLHAGPKSEANSYFFVADHFGWW--SSRAAKEVRPRAALEEYSTDSLENLLFSLCRFHELSGSYPKHVTVVGYTFKQERFRDLHRAALRYPLESFRYVGVDPDTNAFRARLPQLEFFESTASLAPFREDPYGCHSEVLRTKRVDRNPFSRQPGFILSCPEISTLLRYCERKLYPVGELPWDS 307 The following BLAST results are available for this feature:
BLAST of NO13G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00260 ID=NO13G00260|Name=NO13G00260|organism=Nannochloropsis oceanica|type=gene|length=3931bpback to top protein sequence of NO13G00260.2 >NO13G00260.2-protein ID=NO13G00260.2-protein|Name=NO13G00260.2|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top protein sequence of NO13G00260.1 >NO13G00260.1-protein ID=NO13G00260.1-protein|Name=NO13G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=359bpback to top Synonyms
Publications
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