NO12G03480, NO12G03480 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03480 vs. NCBI_GenBank
Match: EWM25689.1 (n-terminal domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 446.4 bits (1147), Expect = 1.500e-121 Identity = 322/653 (49.31%), Postives = 348/653 (53.29%), Query Frame = 0
Query: 1 MAAPLTHSPPFQVMQYTTGGEDGKTGAGGSGTGADMSGQ--DASYAEYCKRQRVYMSPGLWAELDADPQRGLALMDMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVYRPLLMTGTTPNSTSSIFCRNTACNPDADQIILCMSSVLQVQMLHDKQAGG-NEALRERFRVFEAPVTARTGALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLELCSDSFGLRARGASSNSNISAASXXXXXXXXXXXXXXXXXXXXXXSTLPTRPLTGVQPHSPLEPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRNVTASGIALNSPWTPLPQSPSPTYEDVTYMPKGRYVQS 651
MAAPL H+PPF QY E G G S GQ D + AEYCKRQRVYMSPGLWAELDADPQRG+ALMD+A ++YRPLLMTGTTPNSTSSIFCRNTACNP ADQIILCM+SVLQVQMLHDK+A N+ALR++FR FE P+ TG G IH FIEGIFKR+RFSPECNIIALVYINRVISTTSLPLH RNW++VVLVALLLAQKVWDDRC+ALSSFS HLPDFPLER+RLVERKFLELLQYRATV+QALYTRYYFELRALFEKLLEQESISR+FPLKPM +WQARKLELCSDSFGL R ASSN + +A+ XXXXXXXXXXXXXXXX S LP QPHSP+ PFA XXXXXXXXXXXXXXX PR VT S +A SPWTPLPQSPSPTYED+TY PKGRYVQS
Sbjct: 6 MAAPLAHTPPFPAAQYPCANEGGGGQDGNSANNLPYFGQHTDLNSAEYCKRQRVYMSPGLWAELDADPQRGVALMDLA-AAQQAQEAEQFRLRQQQQPQREPQGHDGSKGGYLEAQRGHMQHAWVAEGAGETAMDTGDEGRDKEEDVARFFADSPPAATATRADFPSTRTNISTTGQARAQDDWPMPTPPLPPKSGRSGMEPSREELSAPPPGGHIRSSKTTDDVVSTIYRPLLMTGTTPNSTSSIFCRNTACNPHADQIILCMASVLQVQMLHDKEAANTNQALRDKFRCFEPPLPVATGEAG-------------------SGEGVVAMEGQGPTESQGEEEVTVEEIHCFIEGIFKRARFSPECNIIALVYINRVISTTSLPLHARNWRAVVLVALLLAQKVWDDRCIALSSFSPHLPDFPLERIRLVERKFLELLQYRATVTQALYTRYYFELRALFEKLLEQESISRDFPLKPMTIWQARKLELCSDSFGLCIRQASSNLSPVSANGSXXXXXXXXXXXXXXXXKATGS-LP-------QPHSPVGPFAPGERATAAGGPLRGIPALMASSTSVLPTPPSSHSLAARHAXXXXXXXXXXXXXXXRFRKPRPVT-SDLARRSPWTPLPQSPSPTYEDITYTPKGRYVQS 629
BLAST of NO12G03480 vs. NCBI_GenBank
Match: XP_004030756.1 (n-terminal domain protein [Ichthyophthirius multifiliis] >EGR29520.1 n-terminal domain protein [Ichthyophthirius multifiliis]) HSP 1 Score: 139.0 bits (349), Expect = 5.100e-29 Identity = 69/142 (48.59%), Postives = 102/142 (71.83%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLELCS 489
I+ F++ +++ S+FSPEC II LVYINR+I+ T +PL+P NW+ ++L +LL+AQKVWDD+ ++ + F+ P F + + +E++FLELLQY TV ALY +YYFELRALF+ +EFPL P+ + +A+KLEL S
Sbjct: 50 IYEFMKALYECSKFSPECCIICLVYINRLIAFTGMPLYPTNWRPLILCSLLVAQKVWDDKYLSNADFAFIYPFFVTDEINQLEQRFLELLQYNVTVKSALYAKYYFELRALFKN-------EQEFPLTPLDVDEAQKLELRS 184
BLAST of NO12G03480 vs. NCBI_GenBank
Match: KRX00851.1 (Cyclin-like protein [Pseudocohnilembus persalinus]) HSP 1 Score: 134.0 bits (336), Expect = 1.600e-27 Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLE 486
I+ FI+ ++ ++FSPEC II LVYINR+I+ T +PL+P NW+ ++L +LL+AQKVWDD+ ++ + F+ P F E + +E KFLELLQY+ TV ALY +YYFELRALF+ EFPL P+ A LE
Sbjct: 92 IYEFIKALYDCAQFSPECCIICLVYINRLIAFTQMPLYPTNWRPLILCSLLVAQKVWDDKFLSNADFAFIYPFFVTEEINRLEAKFLELLQYKVTVKSALYAKYYFELRALFKN-------QEEFPLVPLDQQSAALLE 223
BLAST of NO12G03480 vs. NCBI_GenBank
Match: XP_001026214.1 (amine-terminal domain cyclin [Tetrahymena thermophila SB210] >EAS05969.1 amine-terminal domain cyclin [Tetrahymena thermophila SB210]) HSP 1 Score: 132.9 bits (333), Expect = 3.600e-27 Identity = 65/130 (50.00%), Postives = 92/130 (70.77%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPM 477
I+ F++ +++ ++FSPEC II LVYINR+I+ T LPL+P NW+ ++L +LL+AQKVWDD+ ++ + F+ P F E + +E+KFLELLQY TV ALY +YYFELRALF+ EFPL P+
Sbjct: 91 IYEFMKALYECAKFSPECCIICLVYINRLIAFTGLPLYPTNWRPLILCSLLVAQKVWDDKYLSNADFAFIYPFFVTEEINALEQKFLELLQYNVTVKSALYAKYYFELRALFKN-------ESEFPLTPL 213
BLAST of NO12G03480 vs. NCBI_GenBank
Match: XP_001460214.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK92817.1 unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 129.0 bits (323), Expect = 5.200e-26 Identity = 82/247 (33.20%), Postives = 124/247 (50.20%), Query Frame = 0
Query: 239 NSTSSIFCRNTACNPDADQIILCMSSVLQVQMLHDKQAGGNEALRERFRVFEAPVTARTGALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLE 486
N+TSS++ ++T NP+ II +S++L QM D++ G + P T+ I+ F++ ++ ++FSPEC II LVYINR+I+ T L L+P NW+ ++L +LL+AQKVWDD+ ++ + F+ P F + + +E KFLELLQY TV LY +YYFELRALF+ +EFPL P+ + Q+ LE
Sbjct: 13 NTTSSMYIKSTISNPNVKSIIQAVSTILHSQMQEDQEQGK-----------QIPKTSE-----------------LYFFSEEKYIEEKPEEFDEQRKLLLREPPSVDNIYEFMKALYDCAQFSPECCIICLVYINRLIAFTGLTLNPTNWRPLLLSSLLVAQKVWDDKYLSNADFAFIYPFFTTQEINKLEAKFLELLQYNVTVKGDLYAKYYFELRALFKG-------DQEFPLYPLDVTQSANLE 224
BLAST of NO12G03480 vs. NCBI_GenBank
Match: CDW78823.1 (n-terminal domain-containing protein [Stylonychia lemnae]) HSP 1 Score: 125.2 bits (313), Expect = 7.600e-25 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLE 486
I F++ +++ ++FSPEC II+LVYINR+I+ T +PL P NW+ + L +LL+AQKVWDDR ++ + F+ P F E + +E+KFLEL+QY TV LY +YYFELR LF + +EFPL+ + A LE
Sbjct: 87 IFEFMKALYECAQFSPECCIISLVYINRMIAFTEMPLQPTNWRPLALCSLLVAQKVWDDRYLSNADFAFIYPFFVTEEINKLEQKFLELIQYNVTVKSNLYAKYYFELRGLF------KDNEKEFPLQQINRQDAELLE 219
BLAST of NO12G03480 vs. NCBI_GenBank
Match: OMJ78621.1 (hypothetical protein SteCoe_21546 [Stentor coeruleus]) HSP 1 Score: 124.8 bits (312), Expect = 9.900e-25 Identity = 60/139 (43.17%), Postives = 91/139 (65.47%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLE 486
I F+ +++ ++FSPEC II LVYINR+I+ T LPL P NW+ ++L + L+ QKVWDDR ++ + F+ P F E + +E+KFLEL+ Y TV LY +YYFELR L+ + + FP++P+ +A++LE
Sbjct: 97 IFEFMRALYECAQFSPECCIICLVYINRLIAFTGLPLSPTNWRPIILCSFLIGQKVWDDRYLSNADFAYIYPFFSTEEINRLEKKFLELINYSVTVKATLYAKYYFELRGLYNE-------ANNFPIEPIHNEKAKELE 228
BLAST of NO12G03480 vs. NCBI_GenBank
Match: OMJ69773.1 (hypothetical protein SteCoe_32408 [Stentor coeruleus]) HSP 1 Score: 124.4 bits (311), Expect = 1.300e-24 Identity = 60/139 (43.17%), Postives = 91/139 (65.47%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLE 486
I F+ +++ ++FSPEC II LVYINR+I+ T LPL P NW+ ++L + L+ QKVWDDR ++ + F+ P F E + +E+KFLEL+ Y TV LY +YYFELR L+ + + FP++P+ +A++LE
Sbjct: 97 IFEFMRALYECAQFSPECCIICLVYINRLIAFTGLPLSPTNWRPIILCSFLIGQKVWDDRYLSNADFAYIYPFFSTEEINKLEKKFLELINYSVTVKATLYAKYYFELRGLYNE-------ANNFPIEPIHNDKAKELE 228
BLAST of NO12G03480 vs. NCBI_GenBank
Match: XP_004995500.1 (CCNYL1 protein [Salpingoeca rosetta] >EGD83136.1 CCNYL1 protein [Salpingoeca rosetta]) HSP 1 Score: 123.6 bits (309), Expect = 2.200e-24 Identity = 85/267 (31.84%), Postives = 122/267 (45.69%), Query Frame = 0
Query: 239 NSTSSIFCRNTACNPDADQIILCMSSVLQVQMLHDKQAGGNEALRERFRVFEAPVTARTGALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLELCSD-----SFGLRARGASS 501
NSTS++F +T +P+ ++ + C++ L + + E+F P+T R I+ F+ +F ++ + EC II LVY+NR+I+ TSL LH WK VVL A+LLA KVWDD+ V F LP +E M +ER FLE+L + V +Y +YYFELRAL EK ++FPLKP+ QA++LE S+ G RGA S
Sbjct: 87 NSTSTLFVDSTVSSPNLEETLRCVALALSYVVEDGHKQDNPRLFSEKFDEKRHPITDRV------------------------------------RRDYASRIPSENRIYKFMFQLFNSAQLTAECAIITLVYVNRLIAYTSLTLHASTWKRVVLGAILLASKVWDDQAVWNVDFCSMLPSVAVEDMNDLERTFLEMLDFNIDVDSCVYAKYYFELRALAEK------FEKDFPLKPLNKDQAKRLEALSERRHDLMKGFGMRGAQS 311
BLAST of NO12G03480 vs. NCBI_GenBank
Match: EJY76376.1 (Cyclin, N-terminal domain-containing protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 123.2 bits (308), Expect = 2.900e-24 Identity = 63/139 (45.32%), Postives = 92/139 (66.19%), Query Frame = 0
Query: 347 IHHFIEGIFKRSRFSPECNIIALVYINRVISTTSLPLHPRNWKSVVLVALLLAQKVWDDRCVALSSFSQHLPDFPLERMRLVERKFLELLQYRATVSQALYTRYYFELRALFEKLLEQESISREFPLKPMAMWQARKLE 486
I F++ ++ ++FS EC II+LVYINR+I+ T +PL P NW+ +VL +LL+AQKVWDDR ++ + F+ P F E + +E+KFLEL+QY TV LY +YYFELR LF + ++FPL+ + A+ LE
Sbjct: 87 IFDFMKALYDCAQFSSECCIISLVYINRIIAFTEMPLQPTNWRPLVLCSLLVAQKVWDDRYLSNADFAFIYPFFVTEEINKLEQKFLELIQYNVTVKSNLYAKYYFELRGLF------KDNEKDFPLQQITEGDAKLLE 219 The following BLAST results are available for this feature:
BLAST of NO12G03480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03480 ID=NO12G03480|Name=NO12G03480|organism=Nannochloropsis oceanica|type=gene|length=3618bpback to top protein sequence of NO12G03480.1 >NO12G03480.1-protein ID=NO12G03480.1-protein|Name=NO12G03480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=651bpback to top Synonyms
Publications
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